Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 0.0e+00 1441.4 738 100.0
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 1.0e-238 830.5 740 60.1
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 1.3e-230 803.5 760 56.8
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 4.3e-229 798.5 746 58.4
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 2.6e-226 789.3 746 57.2
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 2.9e-225 785.8 742 58.9
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 6.0e-223 778.1 750 56.1
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 8.7e-222 774.2 751 56.6
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 2.5e-221 772.7 735 56.7
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 8.2e-220 767.7 746 55.5
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 3.4e-218 762.3 750 55.1
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 7.6e-218 761.1 744 55.0
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 3.3e-213 745.7 744 55.9
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 4.3e-213 745.3 779 53.3
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 2.8e-212 742.7 735 55.8
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 2.4e-211 739.6 749 53.7
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 3.1e-211 739.2 744 54.0
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 3.1e-211 739.2 739 55.6
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 3.4e-210 735.7 748 54.1
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 5.0e-209 731.9 731 54.9
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 1.4e-208 730.3 748 53.9
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 2.5e-208 729.6 720 54.2
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 5.5e-208 728.4 733 54.4
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 1.6e-207 726.9 750 53.7
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 2.1e-207 726.5 734 54.2
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 3.6e-207 725.7 726 54.3
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 4.6e-207 725.3 745 53.0
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 1.4e-206 723.8 735 55.4
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 1.8e-206 723.4 745 52.9
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 1.5e-205 720.3 745 51.9
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.0e-205 719.9 733 53.9
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 9.7e-205 717.6 763 52.0
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.7e-204 716.8 733 53.8
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 4.8e-204 715.3 750 52.8
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 6.3e-204 714.9 734 53.7
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 1.5e-202 710.3 703 56.5
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 1.1e-200 704.1 735 53.2
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 1.4e-200 703.7 735 52.4
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 6.7e-198 694.9 743 52.5
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 2.6e-197 693.0 731 52.9
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 2.8e-196 689.5 745 51.9
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 6.3e-196 688.3 742 52.6
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 1.7e-193 680.2 754 49.5
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 6.5e-193 678.3 759 49.3
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 2.5e-192 676.4 749 50.3
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 3.2e-192 676.0 750 49.3
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 1.6e-191 673.7 737 51.4
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 8.0e-191 671.4 727 50.9
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 1.4e-190 670.6 744 50.0
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 4.0e-190 669.1 764 50.8
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 6.7e-190 668.3 780 47.9
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 1.2e-189 667.5 746 49.1
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 2.0e-189 666.8 773 47.9
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 1.7e-188 663.7 767 49.2
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 2.2e-188 663.3 742 49.2
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 5.3e-187 658.7 726 48.2
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 8.5e-185 651.4 732 50.0
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 1.1e-184 651.0 744 49.3
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 4.7e-183 645.6 744 46.4
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 6.3e-180 635.2 685 49.9
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 5.4e-179 632.1 746 47.3
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 2.7e-178 629.8 751 48.1
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 6.5e-177 625.2 729 46.1
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 9.8e-173 611.3 756 47.2
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 2.8e-172 609.8 711 48.8
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 3.1e-171 606.3 687 49.8
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 6.6e-169 598.6 748 46.1
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 1.9e-168 597.0 748 44.9
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 3.6e-167 592.8 758 44.7
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 6.4e-164 582.0 753 44.2
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 2.5e-160 570.1 737 45.2
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 4.0e-158 562.8 564 52.1
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 9.5e-152 541.6 737 43.4
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 2.8e-151 540.0 740 43.8
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 3.6e-151 539.7 781 42.5
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 4.1e-147 526.2 732 42.9
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 4.6e-146 522.7 620 47.1
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 6.8e-142 508.8 724 41.4
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 7.1e-139 498.8 504 53.2
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 4.6e-138 496.1 551 48.3
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 3.0e-137 493.4 701 41.8
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 2.1e-130 470.7 634 43.1
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 4.2e-123 446.4 511 48.9
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 2.1e-122 444.1 409 57.0
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 2.1e-114 417.5 444 53.6
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.5e-112 411.4 483 51.1
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 7.9e-106 389.0 750 33.9
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 6.3e-95 352.8 416 45.4
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 1.2e-93 348.6 977 28.8
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.1e-90 336.3 528 40.9
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 8.8e-89 332.4 343 53.1
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 2.8e-87 327.4 334 57.2
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 5.9e-85 319.7 391 47.3
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 3.2e-83 313.9 336 50.0
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 5.2e-81 306.6 340 50.3
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 5.2e-81 306.6 409 44.5
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.7e-79 301.6 556 38.1
Rhsim03G0014800 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.5e-75 287.7 590 35.1
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 9.4e-75 285.8 292 52.1
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 3.6e-74 283.9 292 51.7
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 3.8e-68 263.8 283 50.2
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 1.2e-58 232.3 230 57.0
SEGI_36353 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 2.0e-45 188.3 258 43.4
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 5.0e-44 183.7 184 52.2
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 8.0e-42 176.4 251 43.0
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 1.3e-39 169.1 141 64.5
Rhsim03G0097300 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.3e-39 169.1 373 33.8
PGSC0003DMG401011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 2.7e-37 161.4 197 44.7
SMO356G0176 Selaginella moellendorffii HOM05D005711 ORTHO05D007125 3.6e-34 151.0 318 34.9
CBR_g41427 Chara braunii HOM05D005711 ORTHO05D007125 2.2e-31 141.7 457 25.6
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 4.6e-29 134.0 112 56.2
FvH4_7g07941 Fragaria vesca HOM05D005711 ORTHO05D007125 8.1e-18 96.7 131 45.8
SalBow4G0785 Salvia bowleyana HOM05D005711 ORTHO05D007125 8.1e-18 96.7 137 41.6
MCO09G818 Micromonas commoda HOM05D005711 ORTHO05D007125 9.3e-14 83.2 373 23.3
CBR_g41430 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-11 73.9 248 23.8
Nitab4.5_0010669g0030 Nicotiana tabacum HOM05D005711 ORTHO05D007125 6.9e-09 67.0 161 29.2
FAN26G1840 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.6e-08 65.1 77 48.1
BolC4t25036H Brassica oleracea HOM05D005711 ORTHO05D040726 2.9e-07 61.6 122 38.5
Thecc.05G161000 Theobroma cacao HOM05D005711 ORTHO05D007125 8.4e-07 60.1 42 66.7
arahy.Tifrunner.gnm1.ann1.N4MAIX Arachis hypogaea HOM05D005711 ORTHO05D007125 3.2e-06 58.2 61 47.5


User provided reference genes

Program Settings