Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 1.3e-125 453.0 216 100.0
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 5.2e-82 308.1 217 66.8
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 1.5e-81 306.6 211 67.3
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 1.7e-80 303.1 216 63.4
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 2.2e-80 302.8 218 63.8
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 3.7e-80 302.0 210 65.7
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 3.7e-80 302.0 208 67.3
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 2.4e-79 299.3 212 63.7
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 2.4e-79 299.3 215 63.3
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.1e-79 298.5 208 67.3
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 9.2e-79 297.4 217 62.7
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.2e-78 297.0 217 62.2
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 4.5e-78 295.0 213 63.4
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 4.5e-78 295.0 207 65.7
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 7.7e-78 294.3 212 63.2
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.0e-77 293.9 212 62.7
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.3e-77 293.5 217 62.2
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 2.9e-77 292.4 218 62.8
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 5.0e-77 291.6 209 62.7
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 5.0e-77 291.6 213 60.6
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 6.6e-77 291.2 209 62.2
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 6.6e-77 291.2 218 62.8
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 8.6e-77 290.8 208 62.5
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 1.1e-76 290.4 208 62.5
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.5e-76 290.0 212 61.8
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 1.5e-76 290.0 215 62.3
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 2.5e-76 289.3 208 62.5
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 7.3e-76 287.7 218 62.8
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 9.5e-76 287.3 209 62.2
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 9.5e-76 287.3 207 62.8
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.6e-75 286.6 218 61.9
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 2.8e-75 285.8 209 62.2
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 2.8e-75 285.8 209 62.2
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 2.8e-75 285.8 216 60.2
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 4.7e-75 285.0 208 63.9
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 8.0e-75 284.3 218 61.0
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 8.0e-75 284.3 217 60.4
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 2.3e-74 282.7 213 61.0
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 3.0e-74 282.3 218 60.1
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 4.0e-74 282.0 216 61.6
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 5.2e-74 281.6 213 62.4
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 5.2e-74 281.6 217 59.9
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 6.8e-74 281.2 208 65.4
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 8.9e-74 280.8 218 57.8
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 1.2e-73 280.4 217 60.4
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.5e-73 280.0 208 61.5
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 2.0e-73 279.6 207 60.9
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 2.6e-73 279.3 215 59.5
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 2.6e-73 279.3 217 58.5
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 4.4e-73 278.5 210 60.0
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 5.7e-73 278.1 199 65.8
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 7.5e-73 277.7 217 59.9
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 9.8e-73 277.3 213 61.0
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 9.8e-73 277.3 212 59.4
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 1.7e-72 276.6 210 62.4
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 2.2e-72 276.2 215 58.6
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 3.7e-72 275.4 223 57.0
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 3.7e-72 275.4 223 57.0
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 6.4e-72 274.6 216 60.6
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 8.3e-72 274.2 216 60.2
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 1.4e-71 273.5 217 57.6
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.8e-71 273.1 208 60.1
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 2.4e-71 272.7 219 59.4
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 9.2e-71 270.8 214 57.9
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 9.2e-71 270.8 213 60.1
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 1.6e-70 270.0 218 56.9
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 2.7e-70 269.2 215 58.1
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 3.5e-70 268.9 229 54.6
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 5.9e-70 268.1 204 59.8
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 5.9e-70 268.1 204 59.8
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 3.0e-69 265.8 215 58.1
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 7.3e-68 261.2 215 55.3
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 1.6e-67 260.0 215 57.2
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 4.7e-67 258.5 207 57.0
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 3.1e-66 255.8 213 56.8
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 2.0e-65 253.1 185 63.2
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 3.4e-65 252.3 197 59.9
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 3.7e-64 248.8 213 59.2
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 5.4e-63 245.0 208 55.3
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 8.6e-61 237.7 211 56.4
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 1.8e-58 229.9 195 55.9
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 2.3e-58 229.6 176 60.8
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 6.8e-58 228.0 234 47.4
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 2.6e-57 226.1 164 63.4
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.3e-56 223.8 209 53.1
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 2.2e-56 223.0 196 53.6
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 2.4e-55 219.5 175 60.0
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 2.7e-54 216.1 236 47.9
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 1.0e-53 214.2 169 55.6
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 1.0e-53 214.2 168 60.1
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 3.0e-53 212.6 211 48.8
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 1.5e-52 210.3 161 59.0
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 2.5e-52 209.5 160 62.5
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 5.6e-52 208.4 198 49.5
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 7.6e-49 198.0 173 56.1
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 9.9e-49 197.6 201 47.3
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 1.6e-46 190.3 205 45.9
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 9.6e-44 181.0 175 46.3
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.7e-43 178.7 133 64.7
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 3.5e-38 162.5 197 42.1
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.1e-36 157.5 209 40.2
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 8.1e-35 151.4 105 63.8
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.4e-26 124.0 159 45.3
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 1.5e-25 120.6 84 59.5
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 1.4e-23 114.0 98 54.1
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.2e-22 110.9 100 54.0
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 7.6e-17 91.7 89 48.3
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 1.8e-13 80.5 91 40.7
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 1.1e-12 77.8 100 37.0
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.0e-09 67.0 58 58.6


User provided reference genes

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