Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 8.9e-90 333.6 166 100.0
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 4.3e-52 208.4 160 66.9
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 4.0e-50 201.8 160 62.5
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 1.2e-49 200.3 160 62.5
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 2.6e-49 199.1 160 61.9
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 2.4e-47 192.6 170 58.8
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 9.3e-47 190.7 157 59.9
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 1.3e-45 186.8 170 57.6
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 1.5e-44 183.3 168 56.0
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 2.5e-44 182.6 160 57.5
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 3.3e-44 182.2 170 54.1
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 4.3e-44 181.8 166 53.6
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 2.1e-43 179.5 160 56.9
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 5.3e-42 174.9 160 58.1
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 2.0e-41 172.9 166 50.0
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 2.6e-41 172.6 160 55.6
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 9.9e-41 170.6 170 54.1
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 9.9e-41 170.6 160 55.0
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 2.2e-40 169.5 166 50.6
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 3.8e-40 168.7 153 54.2
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 4.9e-40 168.3 157 53.5
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 6.4e-40 167.9 162 53.7
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 3.2e-39 165.6 170 50.6
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 3.2e-39 165.6 194 51.0
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 4.2e-39 165.2 160 53.8
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 7.1e-39 164.5 135 57.0
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 2.1e-38 162.9 158 52.5
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 2.7e-38 162.5 161 54.7
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 2.7e-38 162.5 158 50.6
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 1.0e-37 160.6 165 49.1
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.8e-37 159.8 166 50.0
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 3.0e-37 159.1 166 49.4
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 1.5e-36 156.8 165 46.7
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 1.5e-36 156.8 159 52.2
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.5e-36 156.8 166 49.4
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 2.5e-36 156.0 165 46.7
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.3e-36 155.6 167 49.1
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.3e-36 155.6 167 49.1
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 5.6e-36 154.8 165 46.7
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 7.4e-36 154.5 171 48.5
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 7.4e-36 154.5 165 46.7
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 9.6e-36 154.1 168 51.8
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 9.6e-36 154.1 165 46.1
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 2.1e-35 152.9 198 43.9
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 2.1e-35 152.9 173 45.7
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.8e-35 152.5 157 49.7
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.8e-35 152.5 150 54.0
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 2.8e-35 152.5 158 51.3
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 6.2e-35 151.4 150 54.7
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 1.1e-34 150.6 162 47.5
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 1.4e-34 150.2 165 44.2
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 1.4e-34 150.2 165 44.2
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 2.4e-34 149.4 160 50.0
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 4.0e-34 148.7 165 43.6
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 4.0e-34 148.7 165 43.6
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 4.0e-34 148.7 165 43.6
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 4.0e-34 148.7 165 52.1
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 1.5e-33 146.7 108 63.0
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 2.6e-33 146.0 167 44.9
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 3.4e-33 145.6 196 44.4
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 5.8e-33 144.8 149 47.0
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 5.8e-33 144.8 157 47.1
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 5.8e-33 144.8 163 48.5
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 1.7e-32 143.3 196 43.4
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 1.7e-32 143.3 167 46.1
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 2.2e-32 142.9 167 46.7
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 4.9e-32 141.7 196 43.9
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 4.9e-32 141.7 168 46.4
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 4.9e-32 141.7 163 47.9
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 6.5e-32 141.4 118 61.9
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 1.4e-31 140.2 167 44.9
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 4.2e-31 138.7 170 42.4
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 2.1e-30 136.3 163 47.9
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 3.5e-30 135.6 153 46.4
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 3.5e-30 135.6 168 45.8
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 6.0e-30 134.8 166 42.8
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 2.3e-29 132.9 165 43.6
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 2.3e-29 132.9 154 44.8
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 3.9e-29 132.1 163 43.6
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 9.6e-28 127.5 106 58.5
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 2.1e-27 126.3 167 41.9
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 1.1e-26 124.0 82 67.1
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 2.5e-23 112.8 73 65.8
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.8e-21 106.7 89 59.6
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 8.7e-21 104.4 136 42.6
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 1.1e-20 104.0 156 35.3
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 1.5e-20 103.6 83 56.6
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.9e-20 103.2 161 37.9
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 1.3e-19 100.5 118 39.8
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 9.0e-18 94.4 158 32.9
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 1.0e-16 90.9 96 44.8
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 1.4e-15 87.0 79 48.1
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 5.5e-15 85.1 172 35.5
Zm00001eb347080 Zea mays HOM05D007488 ORTHO05D009461 2.1e-14 83.2 173 32.4
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 2.7e-14 82.8 66 57.6
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 4.3e-12 75.5 93 40.9
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 4.3e-12 75.5 93 40.9
unitig_21.g20692 Utricularia gibba HOM05D007488 ORTHO05D009461 5.0e-08 62.0 88 37.5
MBI13_g11934_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 4.7e-06 55.5 76 36.8


User provided reference genes

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