Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 4.4e-43 177.6 90 100.0
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 74.4
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 73.3
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 75.6
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 70.0
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 73.3
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 76.7
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 68.9
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 73.3
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 73.3
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 73.3
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 1.7e-31 139.0 86 74.4
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.7e-31 139.0 86 74.4
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 72.2
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 72.2
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 2.3e-31 138.7 87 74.7
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 70.0
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 3.9e-31 137.9 86 73.3
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 3.9e-31 137.9 90 70.0
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 5.1e-31 137.5 88 73.9
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 6.6e-31 137.1 90 73.3
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 8.6e-31 136.7 88 75.0
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 8.6e-31 136.7 90 70.0
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 8.6e-31 136.7 86 74.4
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 68.9
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 1.5e-30 136.0 88 70.5
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 1.9e-30 135.6 86 74.4
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 71.1
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 72.2
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 2.5e-30 135.2 90 68.9
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 71.1
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 71.1
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 71.1
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 71.1
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 68.9
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 71.1
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 71.1
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 4.3e-30 134.4 90 72.2
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 4.3e-30 134.4 86 73.3
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 5.6e-30 134.0 86 74.4
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 5.6e-30 134.0 90 70.0
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 5.6e-30 134.0 90 67.8
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 7.3e-30 133.7 90 70.0
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 7.3e-30 133.7 90 70.0
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 7.3e-30 133.7 90 73.3
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 68.9
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.6e-29 132.5 90 68.9
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.6e-29 132.5 90 68.9
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 67.8
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 70.0
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.8e-29 131.7 86 69.8
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 2.8e-29 131.7 90 70.0
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 3.6e-29 131.3 90 65.6
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 68.9
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 65.6
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 4.7e-29 131.0 90 65.6
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 6.2e-29 130.6 90 68.9
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 6.2e-29 130.6 90 71.1
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 6.2e-29 130.6 90 67.8
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 8.1e-29 130.2 90 66.7
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 8.1e-29 130.2 89 70.8
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 8.1e-29 130.2 86 70.9
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.1e-28 129.8 99 64.6
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 1.1e-28 129.8 88 64.8
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 1.1e-28 129.8 90 66.7
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 1.1e-28 129.8 90 70.0
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 1.4e-28 129.4 90 66.7
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 1.4e-28 129.4 88 64.8
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 1.4e-28 129.4 90 67.8
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 1.4e-28 129.4 90 70.0
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 1.4e-28 129.4 90 71.1
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 1.8e-28 129.0 90 67.8
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.3e-28 128.6 90 68.9
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 2.3e-28 128.6 90 66.7
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.3e-28 128.6 90 67.8
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 3.1e-28 128.3 90 67.8
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 6.8e-28 127.1 90 64.4
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 8.9e-28 126.7 84 70.2
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 8.9e-28 126.7 86 72.1
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 8.9e-28 126.7 86 68.6
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 1.5e-27 125.9 89 65.2
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.5e-27 125.9 90 63.3
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.6e-27 125.2 88 63.6
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 2.6e-27 125.2 86 68.6
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 4.4e-27 124.4 88 65.9
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 5.8e-27 124.0 84 67.9
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 7.5e-27 123.6 97 61.9
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 7.5e-27 123.6 91 63.7
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 7.5e-27 123.6 91 63.7
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.3e-26 122.9 90 61.1
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 1.7e-26 122.5 91 63.7
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 1.7e-26 122.5 97 67.0
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 2.2e-26 122.1 84 69.0
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 6.4e-26 120.6 86 67.4
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.1e-25 119.8 88 60.2
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 4.1e-25 117.9 90 63.3
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 2.1e-24 115.5 88 60.2
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 3.5e-24 114.8 94 59.6
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 1.3e-23 112.8 72 72.2
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 2.3e-23 112.1 69 75.4
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 3.0e-23 111.7 124 47.6
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.9e-22 109.0 70 75.7
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 1.9e-22 109.0 70 67.1
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 3.3e-22 108.2 70 70.0
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 4.3e-22 107.8 70 68.6
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.2e-21 106.3 57 89.5
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 2.1e-21 105.5 70 71.4
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 1.4e-20 102.8 63 73.0
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.8e-20 102.4 69 71.0
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 8.9e-20 100.1 60 76.7
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 8.9e-20 100.1 63 71.4
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.5e-19 99.4 71 69.0
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.0e-19 99.0 66 68.2
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 2.6e-19 98.6 93 54.8
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 1.3e-18 96.3 68 67.6
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 1.4e-17 92.8 55 74.5
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 2.1e-16 89.0 77 62.3
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.1e-14 83.2 71 62.0
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 1.1e-14 83.2 67 64.2
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 5.3e-12 74.3 93 40.9
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 5.8e-11 70.9 90 42.2
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 5.8e-11 70.9 53 64.2
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.7e-07 59.3 41 65.9


User provided reference genes

Program Settings