Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 9.1e-62 240.4 148 100.0
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 4.6e-21 105.1 151 55.0
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 5.1e-20 101.7 144 60.4
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 1.1e-19 100.5 159 52.2
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 1.1e-19 100.5 152 57.2
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 9.5e-19 97.4 154 55.8
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 2.1e-18 96.3 158 44.3
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 2.1e-18 96.3 166 48.8
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 1.8e-17 93.2 139 44.6
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 2.3e-17 92.8 119 49.6
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 2.3e-17 92.8 144 47.9
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 3.1e-17 92.4 149 45.0
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 3.1e-17 92.4 120 55.8
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 4.0e-17 92.0 122 46.7
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 2.0e-16 89.7 119 52.9
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 4.4e-16 88.6 153 49.0
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 7.5e-16 87.8 151 49.7
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 7.5e-16 87.8 151 49.7
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 9.9e-16 87.4 151 49.7
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 6.4e-15 84.7 117 54.7
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 6.4e-15 84.7 154 45.5
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 8.3e-15 84.3 153 47.7
Duzib093G0151 Durio zibethinus HOM05D005060 ORTHO05D005975 1.4e-14 83.6 151 47.7
Duzib128G1851 Durio zibethinus HOM05D005060 ORTHO05D005975 4.1e-14 82.0 143 53.8
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 4.1e-14 82.0 144 44.4
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 4.1e-14 82.0 146 54.1
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 5.4e-14 81.6 163 44.8
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 5.4e-14 81.6 144 43.8
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 5.4e-14 81.6 138 51.4
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 7.1e-14 81.3 131 45.8
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 7.1e-14 81.3 153 47.7
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 1.6e-13 80.1 151 44.4
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 2.7e-13 79.3 134 48.5
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 3.5e-13 79.0 148 41.9
Manes.13G072000 Manihot esculenta HOM05D005060 ORTHO05D005975 4.6e-13 78.6 148 47.3
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 6.0e-13 78.2 145 54.5
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 1.3e-12 77.0 153 45.8
FvH4_7g05170 Fragaria vesca HOM05D005060 ORTHO05D005975 1.7e-12 76.6 150 46.7
FAN06G0894 Fragaria x ananassa HOM05D005060 ORTHO05D005975 1.7e-12 76.6 150 46.7
CANSAT78G0005 Cannabis sativa HOM05D005060 ORTHO05D005975 3.9e-12 75.5 145 55.2
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 5.1e-12 75.1 151 45.7
FAN06G1820 Fragaria x ananassa HOM05D002241 ORTHO05D002458 8.6e-12 74.3 119 51.3
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 8.6e-12 74.3 147 45.6
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 1.1e-11 73.9 135 51.9
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 1.1e-11 73.9 154 47.4
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 2.5e-11 72.8 154 46.8
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 4.3e-11 72.0 156 44.2
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 4.3e-11 72.0 153 50.3
Aqoxy1G00045 Aquilegia oxysepala HOM05D005060 ORTHO05D005975 5.6e-11 71.6 144 52.8
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 5.6e-11 71.6 153 44.4
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 7.3e-11 71.2 149 45.6
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 7.3e-11 71.2 154 46.1
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 9.5e-11 70.9 140 52.1
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 9.5e-11 70.9 155 41.3
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 1.2e-10 70.5 120 52.5
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 2.1e-10 69.7 152 42.8
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 2.8e-10 69.3 153 39.9
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 2.8e-10 69.3 148 45.9
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 2.8e-10 69.3 128 52.3
Cc06_g22810 Coffea canephora HOM05D005060 ORTHO05D005975 3.6e-10 68.9 141 57.4
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 4.7e-10 68.6 147 51.0
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 4.7e-10 68.6 141 49.6
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 4.7e-10 68.6 140 45.7
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 4.7e-10 68.6 148 38.5
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 6.2e-10 68.2 93 67.7
Ciclev10013042m.g Citrus clementina HOM05D005060 ORTHO05D005975 8.1e-10 67.8 146 50.7
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 1.1e-09 67.4 141 49.6
CiPaw.10G123900 Carya illinoinensis HOM05D005060 ORTHO05D005975 1.4e-09 67.0 112 56.2
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 1.4e-09 67.0 132 42.4
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 1.8e-09 66.6 148 44.6
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 2.4e-09 66.2 151 37.7
arahy.Tifrunner.gnm1.ann1.3R5KQS Arachis hypogaea HOM05D005060 ORTHO05D005975 3.1e-09 65.9 151 43.7
CSS0016899 Camellia sinensis var. sinensis HOM05D005060 ORTHO05D005975 3.1e-09 65.9 156 46.8
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 3.1e-09 65.9 133 37.6
Glyma.03G120300 Glycine max HOM05D005060 ORTHO05D005975 4.0e-09 65.5 151 43.7
Lalb_Chr14g0365381 Lupinus albus HOM05D005060 ORTHO05D005975 4.0e-09 65.5 158 39.2
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 4.0e-09 65.5 148 37.8
A09p49780 Brassica napus HOM05D005060 ORTHO05D005975 6.8e-09 64.7 156 45.5
BraA09t40431Z Brassica rapa HOM05D005060 ORTHO05D005975 6.8e-09 64.7 156 45.5
arahy.Tifrunner.gnm1.ann1.U3TF2Z Arachis hypogaea HOM05D005060 ORTHO05D005975 8.9e-09 64.3 151 41.7
Actinidia24546 Actinidia chinensis HOM05D005060 ORTHO05D005975 1.2e-08 63.9 125 50.4
BcaC02g09878 Brassica carinata HOM05D005060 ORTHO05D005975 2.0e-08 63.2 143 46.2
BcaC07g40003 Brassica carinata HOM05D005060 ORTHO05D005975 2.0e-08 63.2 156 44.9
C04p35630 Brassica napus HOM05D005060 ORTHO05D005975 2.0e-08 63.2 143 46.2
C08p32160 Brassica napus HOM05D005060 ORTHO05D005975 2.0e-08 63.2 156 44.9
BolC4t25241H Brassica oleracea HOM05D005060 ORTHO05D005975 2.0e-08 63.2 143 46.2
BolC8t50834H Brassica oleracea HOM05D005060 ORTHO05D005975 2.0e-08 63.2 156 44.9
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 2.0e-08 63.2 152 49.3
Atru.chr1.1518 Acer truncatum HOM05D005060 ORTHO05D005975 3.4e-08 62.4 143 48.3
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 3.4e-08 62.4 140 50.7
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 3.4e-08 62.4 140 50.7
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 4.4e-08 62.0 153 42.5
TWI74G0567 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 5.8e-08 61.6 158 50.0
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 9.9e-08 60.8 119 41.2
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 9.9e-08 60.8 148 42.6
ATR0787G086 Amborella trichopoda HOM05D005060 ORTHO05D005975 1.3e-07 60.5 134 52.2
EL10Ac3g07347 Beta vulgaris HOM05D005060 ORTHO05D005975 1.7e-07 60.1 92 58.7
Ah.13g077380 Amaranthus hybridus HOM05D005060 ORTHO05D005975 3.8e-07 58.9 140 42.1
Haze_20302 Corylus avellana HOM05D005060 ORTHO05D005975 3.8e-07 58.9 144 37.5
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 8.4e-07 57.8 157 45.2
CDE02G1443 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 8.4e-07 57.8 144 49.3
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 8.4e-07 57.8 120 40.8
BcaB02g08343 Brassica carinata HOM05D005060 ORTHO05D005975 1.1e-06 57.4 152 42.8
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 1.4e-06 57.0 135 42.2
A07p23120 Brassica napus HOM05D005060 ORTHO05D005975 1.9e-06 56.6 153 45.1
BraA07t29972Z Brassica rapa HOM05D000531 ORTHO05D001630 1.9e-06 56.6 153 43.1
Gorai.013G000600 Gossypium raimondii HOM05D005060 ORTHO05D005975 1.9e-06 56.6 151 47.7
Os01g0278900 Oryza sativa ssp. japonica HOM05D005060 ORTHO05D005975 2.4e-06 56.2 155 36.1
Sp5g05680 Schrenkiella parvula HOM05D005060 ORTHO05D005975 2.4e-06 56.2 162 43.2
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 3.2e-06 55.8 95 44.2
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 4.2e-06 55.5 93 54.8
A04p03610 Brassica napus HOM05D005060 ORTHO05D005975 7.1e-06 54.7 158 43.7
MBI19_g25016_MAGBIO Magnolia biondii HOM05D005060 ORTHO05D005975 7.1e-06 54.7 141 47.5
Psat3g082360 Pisum sativum HOM05D005060 ORTHO05D005975 7.1e-06 54.7 152 42.1


User provided reference genes

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