Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 4.9e-67 257.7 132 100.0
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 1.3e-14 83.6 103 52.4
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 4.8e-14 81.6 96 53.1
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 8.2e-14 80.9 98 48.0
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 5.3e-13 78.2 101 52.5
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 1.6e-12 76.6 96 55.2
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 2.0e-12 76.3 102 49.0
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 2.6e-12 75.9 98 51.0
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 3.5e-12 75.5 101 54.5
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 4.5e-12 75.1 101 53.5
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 4.5e-12 75.1 101 53.5
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 5.9e-12 74.7 96 53.1
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 5.0e-11 71.6 104 50.0
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 5.0e-11 71.6 98 49.0
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 5.0e-11 71.6 98 49.0
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 1.1e-10 70.5 108 43.5
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 1.9e-10 69.7 106 46.2
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 1.9e-10 69.7 98 46.9
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 1.9e-10 69.7 96 50.0
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 2.5e-10 69.3 93 50.5
Sed0014810 Sechium edule HOM05D007691 ORTHO05D008758 3.2e-10 68.9 103 42.7
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 5.5e-10 68.2 108 41.7
Glyma.16G035200 Glycine max HOM05D007691 ORTHO05D008758 1.2e-09 67.0 99 45.5
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 2.1e-09 66.2 97 45.4
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 2.7e-09 65.9 97 45.4
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 6.1e-09 64.7 96 45.8
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 8.0e-09 64.3 100 45.0
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 8.0e-09 64.3 97 49.5
Duzib128G0235 Durio zibethinus HOM05D007691 ORTHO05D008758 1.0e-08 63.9 96 49.0
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 1.0e-08 63.9 105 40.0
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.8e-08 63.2 97 43.3
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 1.8e-08 63.2 98 46.9
Glyma.19G117800 Glycine max HOM05D007691 ORTHO05D008758 1.8e-08 63.2 97 43.3
ClCG10G015920 Citrullus lanatus HOM05D007691 ORTHO05D008758 2.3e-08 62.8 105 40.0
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 2.3e-08 62.8 95 40.0
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 3.0e-08 62.4 92 42.4
Sed0006259 Sechium edule HOM05D007691 ORTHO05D008758 3.0e-08 62.4 91 44.0
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 5.2e-08 61.6 90 42.2
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 6.7e-08 61.2 102 42.2
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 1.5e-07 60.1 96 44.8
Oeu052775.1 Olea europaea HOM05D026374 ORTHO05D008758 1.5e-07 60.1 96 43.8
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 1.5e-07 60.1 98 44.9
Sabra19G0050800 Salix brachista HOM05D007691 ORTHO05D008758 1.5e-07 60.1 120 35.8
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 2.0e-07 59.7 91 42.9
PGSC0003DMG400010130 Solanum tuberosum HOM05D018532 ORTHO05D008758 2.0e-07 59.7 90 42.2
CsaV3_3G040570 Cucumis sativus L. HOM05D007691 ORTHO05D008758 4.4e-07 58.5 92 43.5
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 4.4e-07 58.5 93 41.9
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 5.7e-07 58.2 105 38.1
Sopen03g029460 Solanum pennellii HOM05D018532 ORTHO05D008758 5.7e-07 58.2 90 40.0
Medtr6g027320 Medicago truncatula HOM05D007691 ORTHO05D008758 7.5e-07 57.8 71 40.8
Duzib128G0872 Durio zibethinus HOM05D014272 ORTHO05D008758 9.7e-07 57.4 99 45.5
arahy.Tifrunner.gnm1.ann1.BJ9957 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.3e-06 57.0 103 38.8
Psat1g088640 Pisum sativum HOM05D007691 ORTHO05D008758 1.7e-06 56.6 99 35.4
PGR142G1160 Punica granatum HOM05D007691 ORTHO05D008758 2.2e-06 56.2 93 47.3
Hma1.2p1_0636F.1_g193350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 2.8e-06 55.8 44 59.1
arahy.Tifrunner.gnm1.ann1.N1UETT Arachis hypogaea HOM05D007691 ORTHO05D008758 6.3e-06 54.7 103 38.8
Gohir.A08G220400 Gossypium hirsutum HOM05D007691 ORTHO05D008758 6.3e-06 54.7 99 42.4
Phvul.001G106200 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 6.3e-06 54.7 93 41.9
PGR142G3022 Punica granatum HOM05D007691 ORTHO05D008758 8.2e-06 54.3 93 45.2


User provided reference genes

Program Settings