Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 8.8e-137 490.3 258 100.0
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 5.1e-60 235.3 186 67.2
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 5.6e-59 231.9 173 69.9
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 1.3e-58 230.7 178 62.9
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 2.1e-58 229.9 184 62.0
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 1.4e-57 227.3 176 61.9
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 3.1e-57 226.1 177 61.6
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 3.1e-57 226.1 165 68.5
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 1.2e-56 224.2 193 60.6
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 1.2e-56 224.2 177 62.7
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.6e-56 223.0 174 60.9
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.6e-56 223.0 174 60.9
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.4e-56 222.6 171 64.3
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 4.5e-56 222.2 163 65.0
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 5.8e-56 221.9 174 60.3
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 5.8e-56 221.9 170 62.9
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 2.2e-55 219.9 169 61.5
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 2.9e-55 219.5 183 61.2
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 3.8e-55 219.2 171 62.0
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 6.5e-55 218.4 166 67.5
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.1e-54 217.6 174 59.8
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 1.4e-54 217.2 169 60.4
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 1.9e-54 216.9 169 62.1
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 2.5e-54 216.5 170 61.8
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 3.2e-54 216.1 176 63.6
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 4.2e-54 215.7 176 63.6
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 4.2e-54 215.7 173 61.3
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 5.5e-54 215.3 176 63.1
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 3.5e-53 212.6 161 62.7
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 3.5e-53 212.6 174 60.3
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 4.6e-53 212.2 161 59.6
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 4.6e-53 212.2 181 59.7
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 4.6e-53 212.2 161 62.7
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 6.0e-53 211.8 161 64.0
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 7.9e-53 211.5 171 60.2
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 7.9e-53 211.5 166 62.7
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.8e-52 210.3 164 59.8
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 1.8e-52 210.3 169 62.7
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 2.3e-52 209.9 164 59.8
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 2.3e-52 209.9 175 61.1
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 3.9e-52 209.1 175 59.4
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 3.9e-52 209.1 164 59.8
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 8.7e-52 208.0 162 59.9
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 1.5e-51 207.2 166 61.4
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 1.9e-51 206.8 176 59.7
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 3.3e-51 206.1 177 58.8
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 3.3e-51 206.1 176 59.7
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 3.3e-51 206.1 173 63.0
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 4.3e-51 205.7 178 58.4
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 4.3e-51 205.7 175 58.9
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 4.3e-51 205.7 175 58.9
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 5.7e-51 205.3 174 56.9
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 3.7e-50 202.6 167 59.3
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 4.8e-50 202.2 167 58.1
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 6.3e-50 201.8 157 62.4
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 1.4e-49 200.7 166 60.2
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 1.8e-49 200.3 177 58.8
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 1.8e-49 200.3 172 59.9
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 3.1e-49 199.5 167 58.1
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 4.1e-49 199.1 166 61.4
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 6.9e-49 198.4 161 58.4
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 1.5e-48 197.2 161 55.9
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.7e-47 193.7 168 56.5
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 1.7e-47 193.7 165 59.4
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 2.2e-47 193.4 164 58.5
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 3.8e-47 192.6 179 54.2
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 1.2e-45 187.6 159 61.0
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 2.1e-45 186.8 171 55.0
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.9e-44 182.6 173 56.6
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 2.2e-42 176.8 185 49.7
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 8.2e-42 174.9 156 55.1
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 2.4e-41 173.3 168 54.2
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 2.6e-40 169.9 161 54.0
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 8.8e-36 154.8 204 44.6
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 2.6e-32 143.3 163 47.9
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 1.6e-29 134.0 255 31.0
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.1e-29 132.1 168 45.2
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 5.1e-28 129.0 245 31.0
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.5e-27 127.5 182 37.4
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.3e-27 126.3 176 42.6
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 4.4e-27 125.9 165 43.0
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 1.2e-24 117.9 207 34.3
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.5e-24 116.3 165 40.0
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 8.5e-23 111.7 175 39.4
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.9e-22 110.5 186 37.1
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.2e-22 108.6 182 37.9
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 7.2e-22 108.6 170 39.4
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.0e-20 104.8 119 46.2
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 4.0e-20 102.8 65 66.2
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.8e-18 96.7 90 55.6
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.1e-17 94.7 173 35.8
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 2.4e-17 93.6 95 49.5
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.1e-17 93.2 172 30.2
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.1e-17 92.8 171 31.0
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 4.1e-17 92.8 80 58.8
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 4.5e-16 89.4 167 32.9
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 8.0e-13 78.6 167 31.7
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 3.0e-12 76.6 124 34.7
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 1.2e-11 74.7 115 36.5
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 3.4e-11 73.2 125 31.2
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.1e-09 66.2 178 28.7
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.6e-08 64.3 95 36.8
Manes.10G123525 Manihot esculenta HOM05D007512 ORTHO05D020513 1.9e-06 57.4 125 24.8
COL.COLO4_13576 Corchorus olitorius HOM05D007512 ORTHO05D020513 3.2e-06 56.6 112 32.1


User provided reference genes

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