Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02012 Eucalyptus grandis HOM05D006911 ORTHO05D006663 7.8e-63 243.8 140 100.0
QL08p044828 Quercus lobata HOM05D006911 ORTHO05D006663 3.7e-12 75.5 85 52.9
Potri.005G203800 Populus trichocarpa HOM05D006911 ORTHO05D006663 4.8e-12 75.1 86 47.7
Thecc.01G170800 Theobroma cacao HOM05D006911 ORTHO05D006663 5.3e-11 71.6 87 47.1
Cpa.g.sc50.102 Carica papaya HOM05D006911 ORTHO05D006663 9.0e-11 70.9 59 55.9
CiPaw.04G139200 Carya illinoinensis HOM05D006911 ORTHO05D006663 2.6e-10 69.3 85 48.2
MD17G1137200 Malus domestica HOM05D006911 ORTHO05D006663 2.6e-10 69.3 100 45.0
MD09G1150000 Malus domestica HOM05D006911 ORTHO05D006663 3.4e-10 68.9 100 45.0
Cfa023065 Carpinus fangiana HOM05D006911 ORTHO05D006663 4.5e-10 68.6 63 58.7
Haze_13522 Corylus avellana HOM05D006911 ORTHO05D006663 4.5e-10 68.6 63 58.7
Potri.002G058400 Populus trichocarpa HOM05D006911 ORTHO05D006663 7.6e-10 67.8 58 55.2
Duzib133G0070 Durio zibethinus HOM05D006911 ORTHO05D006663 2.2e-09 66.2 87 44.8
COL.COLO4_07174 Corchorus olitorius HOM05D006911 ORTHO05D006663 2.9e-09 65.9 89 44.9
Manes.07G101802 Manihot esculenta HOM05D006911 ORTHO05D006663 3.8e-09 65.5 88 44.3
CSS0014266 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.1e-08 63.9 85 42.4
CSS0033096 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.1e-08 63.9 85 42.4
Migut.M00927 Erythranthe guttata HOM05D006911 ORTHO05D006663 1.1e-08 63.9 61 55.7
Prupe.3G175200 Prunus persica HOM05D006911 ORTHO05D006663 1.4e-08 63.5 97 42.3
Gohir.A10G039300 Gossypium hirsutum HOM05D006911 ORTHO05D006663 3.2e-08 62.4 57 56.1
Medtr5g091310 Medicago truncatula HOM05D006911 ORTHO05D006663 3.2e-08 62.4 93 39.8
Ciclev10033778m.g Citrus clementina HOM05D006911 ORTHO05D006663 5.5e-08 61.6 88 42.0
FvH4_6g38520 Fragaria vesca HOM05D006911 ORTHO05D006663 5.5e-08 61.6 87 43.7
FAN02G1638 Fragaria x ananassa HOM05D006911 ORTHO05D006663 5.5e-08 61.6 87 43.7
FAN14G5866 Fragaria x ananassa HOM05D006911 ORTHO05D006663 5.5e-08 61.6 87 43.7
Gohir.D11G163600 Gossypium hirsutum HOM05D006911 ORTHO05D006663 5.5e-08 61.6 58 56.9
Gorai.007G174300 Gossypium raimondii HOM05D006911 ORTHO05D006663 5.5e-08 61.6 58 56.9
COL.COLO4_24713 Corchorus olitorius HOM05D006911 ORTHO05D006663 7.2e-08 61.2 64 50.0
Gohir.D10G040100 Gossypium hirsutum HOM05D006911 ORTHO05D006663 7.2e-08 61.2 57 54.4
Gorai.011G042200 Gossypium raimondii HOM05D006911 ORTHO05D006663 7.2e-08 61.2 57 54.4
Sp1g05240 Schrenkiella parvula HOM05D006911 ORTHO05D006663 7.2e-08 61.2 54 59.3
TWI14G1424 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 7.2e-08 61.2 88 40.9
Gohir.A11G156500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 9.3e-08 60.8 55 58.2
RcHm_v2.0_Chr2g0151771 Rosa chinensis HOM05D006911 ORTHO05D006663 9.3e-08 60.8 115 41.7
Lj6g0027673 Lotus japonicus HOM05D006911 ORTHO05D006663 1.6e-07 60.1 48 66.7
QL05p059038 Quercus lobata HOM05D006911 ORTHO05D006663 1.6e-07 60.1 58 51.7
LjContig00049g0014504 Lotus japonicus HOM05D006911 ORTHO05D006663 2.1e-07 59.7 58 50.0
Ciclev10017350m.g Citrus clementina HOM05D006911 ORTHO05D006663 2.7e-07 59.3 62 51.6
Thecc.06G153400 Theobroma cacao HOM05D006911 ORTHO05D006663 2.7e-07 59.3 64 48.4
MBI10_g27413_MAGBIO Magnolia biondii HOM05D006911 ORTHO05D006663 3.6e-07 58.9 51 51.0
Nn3g20669 Nelumbo nucifera HOM05D006911 ORTHO05D006663 3.6e-07 58.9 60 45.0
ClCG03G007000 Citrullus lanatus HOM05D006911 ORTHO05D006663 4.6e-07 58.5 64 51.6
Glyma.08G308500 Glycine max HOM05D006911 ORTHO05D006663 4.6e-07 58.5 46 58.7
Nn4g26517 Nelumbo nucifera HOM05D006911 ORTHO05D006663 4.6e-07 58.5 60 48.3
COL.COLO4_38300 Corchorus olitorius HOM05D006911 ORTHO05D006663 6.1e-07 58.2 64 48.4
Thhalv10009210m.g Eutrema salsugineum HOM05D006911 ORTHO05D006663 6.1e-07 58.2 51 56.9
Aa31LG1G7540 Aethionema arabicum HOM05D006911 ORTHO05D006663 7.9e-07 57.8 45 60.0
SalBow6G3836 Salvia bowleyana HOM05D006911 ORTHO05D006663 7.9e-07 57.8 53 49.1
arahy.Tifrunner.gnm1.ann1.A53T08 Arachis hypogaea HOM05D006911 ORTHO05D006663 1.0e-06 57.4 50 60.0
C05p04730 Brassica napus HOM05D006911 ORTHO05D006663 1.3e-06 57.0 54 53.7
BolC5t29245H Brassica oleracea HOM05D006911 ORTHO05D006663 1.3e-06 57.0 54 53.7
Carub.0001s0584 Capsella rubella HOM05D006911 ORTHO05D006663 1.3e-06 57.0 47 53.2
CARHR006090 Cardamine hirsuta HOM05D006911 ORTHO05D006663 1.3e-06 57.0 51 56.9
SalBow7G2931 Salvia bowleyana HOM05D006911 ORTHO05D006663 1.3e-06 57.0 53 49.1
THA.LOC104800829 Tarenaya hassleriana HOM05D006911 ORTHO05D006663 1.3e-06 57.0 62 51.6
BcaB02g06798 Brassica carinata HOM05D006911 ORTHO05D006663 1.8e-06 56.6 54 53.7
BraA10t42779Z Brassica rapa HOM05D006911 ORTHO05D006663 1.8e-06 56.6 54 53.7
Gohir.D05G152400 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.8e-06 56.6 64 46.9
Phvul.006G031600 Phaseolus vulgaris HOM05D006911 ORTHO05D006663 1.8e-06 56.6 44 56.8
Potri.011G079900 Populus trichocarpa HOM05D006911 ORTHO05D006663 1.8e-06 56.6 62 45.2
arahy.Tifrunner.gnm1.ann1.M9VZ51 Arachis hypogaea HOM05D006911 ORTHO05D006663 2.3e-06 56.2 50 58.0
Glyma.14G029400 Glycine max HOM05D006911 ORTHO05D006663 2.3e-06 56.2 37 70.3
Oeu052383.1 Olea europaea HOM05D006911 ORTHO05D006663 2.3e-06 56.2 60 46.7
Phvul.008G193200 Phaseolus vulgaris HOM05D006911 ORTHO05D006663 2.3e-06 56.2 51 56.9
Manes.15G119700 Manihot esculenta HOM05D006911 ORTHO05D006663 3.0e-06 55.8 51 54.9
AL1G16490 Arabidopsis lyrata HOM05D006911 ORTHO05D006663 3.9e-06 55.5 51 51.0
Migut.H01374 Erythranthe guttata HOM05D006911 ORTHO05D006663 5.1e-06 55.1 34 70.6
Gohir.A05G149800 Gossypium hirsutum HOM05D006911 ORTHO05D006663 5.1e-06 55.1 64 45.3
Potri.004G131200 Populus trichocarpa HOM05D006911 ORTHO05D006663 5.1e-06 55.1 66 43.9
AT1G06475 Arabidopsis thaliana HOM05D006911 ORTHO05D006663 6.7e-06 54.7 51 51.0
TWI09G0032 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 6.7e-06 54.7 64 46.9
Cc09_g08880 Coffea canephora HOM05D006911 ORTHO05D006663 8.7e-06 54.3 53 52.8
Sed0027001 Sechium edule HOM05D006911 ORTHO05D006663 8.7e-06 54.3 98 40.8


User provided reference genes

Program Settings