Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02011 Eucalyptus grandis HOM05D004223 ORTHO05D004792 5.9e-158 560.8 285 100.0
PGR042G1019 Punica granatum HOM05D004223 ORTHO05D004792 4.4e-73 278.9 263 58.9
Cfa023352 Carpinus fangiana HOM05D004223 ORTHO05D004792 5.1e-69 265.4 262 56.5
Nn3g20665 Nelumbo nucifera HOM05D004223 ORTHO05D004792 3.1e-66 256.1 264 53.8
Dinv32277 Davidia involucrata HOM05D004223 ORTHO05D004792 1.2e-65 254.2 261 57.1
QL08p044806 Quercus lobata HOM05D004223 ORTHO05D004792 7.6e-65 251.5 261 54.0
Nitab4.5_0001655g0250 Nicotiana tabacum HOM05D004223 ORTHO05D004792 3.8e-64 249.2 261 52.9
Thecc.01G170900 Theobroma cacao HOM05D004223 ORTHO05D004792 3.8e-64 249.2 261 53.3
Potri.005G203600 Populus trichocarpa HOM05D004223 ORTHO05D004792 1.1e-63 247.7 261 53.6
Dinv30715 Davidia involucrata HOM05D004223 ORTHO05D004792 1.9e-63 246.9 261 56.3
TWI59G0075 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 5.4e-63 245.4 266 53.0
Duzib133G0675 Durio zibethinus HOM05D004223 ORTHO05D004792 4.6e-62 242.3 243 54.3
Solyc02g070860.4 Solanum lycopersicum HOM05D004223 ORTHO05D004792 7.9e-62 241.5 261 51.3
Actinidia19511 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.8e-61 240.4 261 52.9
Sopen02g019940 Solanum pennellii HOM05D004223 ORTHO05D004792 3.0e-61 239.6 261 51.3
Actinidia07682 Actinidia chinensis HOM05D004223 ORTHO05D004792 5.1e-61 238.8 261 52.1
Ciclev10031935m.g Citrus clementina HOM05D004223 ORTHO05D004792 5.1e-61 238.8 261 51.7
Ca_06273_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 1.1e-60 237.7 286 49.7
RcHm_v2.0_Chr2g0151741 Rosa chinensis HOM05D004223 ORTHO05D004792 1.9e-60 236.9 261 51.3
Aqoxy1G01765 Aquilegia oxysepala HOM05D004223 ORTHO05D004792 2.5e-60 236.5 261 50.2
MD17G1137300 Malus domestica HOM05D004223 ORTHO05D004792 2.5e-60 236.5 261 50.6
MD05G1287300 Malus domestica HOM05D004223 ORTHO05D004792 3.3e-60 236.1 261 50.2
Rhsim02G0155900 Rhododendron simsii HOM05D004223 ORTHO05D004792 3.3e-60 236.1 262 51.1
Potri.002G058500 Populus trichocarpa HOM05D004223 ORTHO05D004792 4.3e-60 235.7 261 52.5
ClCG02G018450 Citrullus lanatus HOM05D004223 ORTHO05D004792 4.8e-59 232.3 262 50.8
Sabra02G0047600 Salix brachista HOM05D004223 ORTHO05D004792 8.1e-59 231.5 261 51.3
FvH4_6g38510 Fragaria vesca HOM05D004223 ORTHO05D004792 1.1e-58 231.1 261 50.2
Prupe.4G077600 Prunus persica HOM05D004223 ORTHO05D004792 1.1e-58 231.1 261 47.9
Gohir.D10G040000 Gossypium hirsutum HOM05D004223 ORTHO05D004792 1.4e-58 230.7 272 50.0
Gorai.011G042100 Gossypium raimondii HOM05D004223 ORTHO05D004792 1.4e-58 230.7 272 50.0
Migut.M00929 Erythranthe guttata HOM05D004223 ORTHO05D004792 1.8e-58 230.3 265 51.3
MD10G1264700 Malus domestica HOM05D004223 ORTHO05D004792 1.8e-58 230.3 261 49.0
CANSAT35G1433 Cannabis sativa HOM05D004223 ORTHO05D004792 5.3e-58 228.8 263 50.6
Cc09_g08890 Coffea canephora HOM05D004223 ORTHO05D004792 5.3e-58 228.8 261 48.3
Gohir.A10G039200 Gossypium hirsutum HOM05D004223 ORTHO05D004792 6.9e-58 228.4 272 50.0
TPR.G12676 Trifolium pratense HOM05D004223 ORTHO05D004792 9.0e-58 228.0 282 48.2
MELO3C019676.2 Cucumis melo HOM05D004223 ORTHO05D004792 1.2e-57 227.6 261 49.0
Medtr5g091370 Medicago truncatula HOM05D004223 ORTHO05D004792 1.2e-57 227.6 280 47.1
GSVIVG01021418001 Vitis vinifera HOM05D004223 ORTHO05D004792 2.0e-57 226.9 261 51.0
EL10Ac8g19745 Beta vulgaris HOM05D004223 ORTHO05D004792 3.4e-57 226.1 269 48.0
Atru.chr6.2065 Acer truncatum HOM05D004223 ORTHO05D004792 4.5e-57 225.7 262 50.4
CAN.G257.3 Capsicum annuum HOM05D004223 ORTHO05D004792 4.5e-57 225.7 261 49.4
Thecc.06G153700 Theobroma cacao HOM05D004223 ORTHO05D004792 7.6e-57 224.9 272 50.4
Duzib235G1300 Durio zibethinus HOM05D004223 ORTHO05D004792 1.7e-56 223.8 272 49.3
RcHm_v2.0_Chr5g0013511 Rosa chinensis HOM05D004223 ORTHO05D004792 1.7e-56 223.8 264 50.0
Sed0004086 Sechium edule HOM05D004223 ORTHO05D004792 1.7e-56 223.8 262 50.4
Ciclev10015725m.g Citrus clementina HOM05D004223 ORTHO05D004792 2.9e-56 223.0 273 45.8
Prupe.3G175100 Prunus persica HOM05D004223 ORTHO05D004792 2.9e-56 223.0 261 49.8
Sed0020532 Sechium edule HOM05D004223 ORTHO05D004792 1.1e-55 221.1 261 49.8
AUR62030243 Chenopodium quinoa HOM05D004223 ORTHO05D004792 1.9e-55 220.3 261 47.5
Glyma.05G129300 Glycine max HOM05D004223 ORTHO05D004792 2.5e-55 219.9 261 47.1
DCAR_003936 Daucus carota HOM05D004223 ORTHO05D004792 3.2e-55 219.5 268 50.7
HanXRQChr04g0118281 Helianthus annuus HOM05D004223 ORTHO05D004792 4.2e-55 219.2 261 49.4
arahy.Tifrunner.gnm1.ann1.KB83YE Arachis hypogaea HOM05D004223 ORTHO05D004792 7.1e-55 218.4 261 46.0
FvH4_3g05960 Fragaria vesca HOM05D004223 ORTHO05D004792 7.1e-55 218.4 264 50.4
Oeu046871.2 Olea europaea HOM05D004223 ORTHO05D004792 7.1e-55 218.4 269 48.7
Glyma.08G084000 Glycine max HOM05D004223 ORTHO05D004792 1.6e-54 217.2 261 46.0
MSTRG.7472 Avicennia marina HOM05D004223 ORTHO05D004792 2.1e-54 216.9 242 50.4
arahy.Tifrunner.gnm1.ann1.EM1NUG Arachis hypogaea HOM05D004223 ORTHO05D004792 2.7e-54 216.5 261 45.6
QL05p059118 Quercus lobata HOM05D004223 ORTHO05D004792 4.6e-54 215.7 261 47.1
CsaV3_6G013790 Cucumis sativus L. HOM05D004223 ORTHO05D004792 6.0e-54 215.3 261 47.5
PSO675G0042 Papaver somniferum HOM05D004223 ORTHO05D004792 6.0e-54 215.3 266 46.6
Sc05g0006430 Simmondsia chinensis HOM05D004223 ORTHO05D004792 7.9e-54 214.9 261 48.3
SalBow8G4695 Salvia bowleyana HOM05D004223 ORTHO05D004792 1.3e-53 214.2 303 42.9
SalBow8G5598 Salvia bowleyana HOM05D004223 ORTHO05D004792 1.3e-53 214.2 303 42.9
Oeu019944.1 Olea europaea HOM05D004223 ORTHO05D004792 1.8e-53 213.8 262 48.1
Phvul.002G194500 Phaseolus vulgaris HOM05D004223 ORTHO05D004792 2.3e-53 213.4 261 45.6
COL.COLO4_07169 Corchorus olitorius HOM05D000230 ORTHO05D000176 1.5e-52 210.7 272 47.8
Peaxi162Scf00214g01114 Petunia axillaris HOM05D004223 ORTHO05D004792 1.9e-52 210.3 242 48.8
DCAR_027947 Daucus carota HOM05D004223 ORTHO05D004792 2.5e-52 209.9 263 47.1
PSO541G2658 Papaver somniferum HOM05D004223 ORTHO05D004792 2.5e-52 209.9 266 45.9
Aa31LG1G24730 Aethionema arabicum HOM05D004223 ORTHO05D004792 3.3e-52 209.5 260 46.2
Gohir.A07G080900 Gossypium hirsutum HOM05D004223 ORTHO05D004792 4.3e-52 209.1 261 49.0
Migut.H01375 Erythranthe guttata HOM05D004223 ORTHO05D004792 7.4e-52 208.4 265 47.9
VMungo0251G1974 Vigna mungo HOM05D004223 ORTHO05D004792 9.6e-52 208.0 261 44.1
AL5G40980 Arabidopsis lyrata HOM05D004223 ORTHO05D004792 1.3e-51 207.6 261 44.1
Medtr4g096650 Medicago truncatula HOM05D004223 ORTHO05D004792 1.3e-51 207.6 261 45.2
Lalb_Chr12g0208891 Lupinus albus HOM05D004223 ORTHO05D004792 1.6e-51 207.2 261 44.4
Gorai.001G092500 Gossypium raimondii HOM05D004223 ORTHO05D004792 2.1e-51 206.8 261 49.4
THA.LOC104803347 Tarenaya hassleriana HOM05D004223 ORTHO05D004792 2.8e-51 206.5 261 46.0
CARHR169510 Cardamine hirsuta HOM05D004223 ORTHO05D004792 4.8e-51 205.7 261 44.1
Nitab4.5_0001040g0160 Nicotiana tabacum HOM05D004223 ORTHO05D004792 4.8e-51 205.7 243 48.1
Manes.17G067700 Manihot esculenta HOM05D004223 ORTHO05D004792 1.1e-50 204.5 262 47.3
AT3G59090 Arabidopsis thaliana HOM05D004223 ORTHO05D004792 1.4e-50 204.1 264 44.3
CiPaw.10G093300 Carya illinoinensis HOM05D004223 ORTHO05D004792 1.4e-50 204.1 259 45.9
FAN02G1578 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.5e-49 200.7 279 45.5
Psat7g090920 Pisum sativum HOM05D004223 ORTHO05D004792 1.5e-49 200.7 261 43.3
ECA236G2733 Erigeron canadensis HOM05D004223 ORTHO05D004792 3.4e-49 199.5 219 54.8
Carub.0005s2585 Capsella rubella HOM05D004223 ORTHO05D004792 4.5e-49 199.1 261 42.9
Lsat_1_v5_gn_7_32901 Lactuca sativa HOM05D004223 ORTHO05D004792 4.5e-49 199.1 240 49.6
Lj4g0000090 Lotus japonicus HOM05D004223 ORTHO05D004792 4.5e-49 199.1 261 43.3
BcaC07g40242 Brassica carinata HOM05D004223 ORTHO05D004792 5.8e-49 198.7 261 44.1
Zm00001eb153380 Zea mays HOM05D004223 ORTHO05D004792 5.8e-49 198.7 274 42.3
Thhalv10006050m.g Eutrema salsugineum HOM05D004223 ORTHO05D004792 7.6e-49 198.4 261 43.7
BraA07t30092Z Brassica rapa HOM05D000230 ORTHO05D000176 1.0e-48 198.0 261 42.1
FAN11G3669 Fragaria x ananassa HOM05D004223 ORTHO05D004792 2.2e-48 196.8 252 47.6
PGR042G0116 Punica granatum HOM05D004223 ORTHO05D004792 6.5e-48 195.3 263 44.5
A07p24480 Brassica napus HOM05D000230 ORTHO05D000176 8.4e-48 194.9 261 41.8
TPR.G4831 Trifolium pratense HOM05D004223 ORTHO05D004792 1.4e-47 194.1 262 43.9
TWI53G0125 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 2.5e-47 193.4 246 47.6
ATR0585G108 Amborella trichopoda HOM05D004223 ORTHO05D004792 4.2e-47 192.6 258 44.2
Hund21517 Selenicereus undatus HOM05D004223 ORTHO05D004792 7.1e-47 191.8 243 44.9
Lsat_1_v5_gn_7_7501 Lactuca sativa HOM05D004223 ORTHO05D004792 3.5e-46 189.5 247 45.7
C06p25880 Brassica napus HOM05D000230 ORTHO05D000176 4.6e-46 189.1 261 40.6
BolC6t37750H Brassica oleracea HOM05D000230 ORTHO05D000176 4.6e-46 189.1 261 40.6
CDE09G0669 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 7.9e-46 188.3 264 42.4
A09p51500 Brassica napus HOM05D004223 ORTHO05D004792 1.3e-45 187.6 262 42.0
BraA09t40587Z Brassica rapa HOM05D004223 ORTHO05D004792 1.3e-45 187.6 262 42.0
Sp5g03900 Schrenkiella parvula HOM05D004223 ORTHO05D004792 1.3e-45 187.6 261 42.1
BcaC07g40241 Brassica carinata HOM05D004223 ORTHO05D004792 1.8e-45 187.2 262 42.0
C08p34260 Brassica napus HOM05D004223 ORTHO05D004792 1.8e-45 187.2 262 42.0
BolC8t51023H Brassica oleracea HOM05D004223 ORTHO05D004792 1.8e-45 187.2 262 42.0
Os01g0751300 Oryza sativa ssp. japonica HOM05D004223 ORTHO05D004792 3.3e-44 183.0 274 41.2
SGA_v2.0_scaffold1G00153 Striga asiatica HOM05D004223 ORTHO05D004792 7.4e-44 181.8 263 44.5
COL.COLO4_06072 Corchorus olitorius HOM05D004223 ORTHO05D004792 1.2e-41 174.5 184 51.6
HPP92_021479 Vanilla planifolia HOM05D004223 ORTHO05D004792 1.5e-41 174.1 263 40.7
FAN16G0695 Fragaria x ananassa HOM05D004223 ORTHO05D004792 4.5e-41 172.6 248 42.3
Gohir.D07G086500 Gossypium hirsutum HOM05D004223 ORTHO05D004792 4.5e-41 172.6 261 45.2
Ah.14g086580 Amaranthus hybridus HOM05D004223 ORTHO05D004792 2.2e-40 170.2 184 51.6
Sed0009895 Sechium edule HOM05D004223 ORTHO05D004792 1.1e-39 167.9 265 41.9
Psat2g016680 Pisum sativum HOM05D004223 ORTHO05D004792 4.2e-39 166.0 209 45.0
MELO3C002724.2 Cucumis melo HOM05D004223 ORTHO05D004792 1.2e-38 164.5 264 41.7
TAR624G0476 Trochodendron aralioides HOM05D004223 ORTHO05D004792 4.6e-38 162.5 165 53.3
BcaC08g44958 Brassica carinata HOM05D000230 ORTHO05D000176 1.8e-37 160.6 261 37.9
Ca_18272_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 1.8e-37 160.6 179 46.9
unitig_92.g28154 Utricularia gibba HOM05D004223 ORTHO05D004792 2.3e-37 160.2 266 37.6
BcaB02g07485 Brassica carinata HOM05D004223 ORTHO05D004792 3.9e-37 159.5 306 35.0
SGA_v2.0_scaffold333G49006 Striga asiatica HOM05D004223 ORTHO05D004792 6.7e-37 158.7 223 45.7
Duzib160G0026 Durio zibethinus HOM05D004223 ORTHO05D004792 3.7e-35 152.9 272 39.3
Atru.chr10.1339 Acer truncatum HOM05D004223 ORTHO05D004792 6.3e-35 152.1 156 50.0
vmacro10944 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 1.1e-34 151.4 428 29.4
Pp3c6_6380 Physcomitrium patens HOM05D004223 ORTHO05D004792 1.4e-34 151.0 225 41.8
Mapoly0056s0052 Marchantia polymorpha HOM05D004223 ORTHO05D004792 6.9e-34 148.7 237 38.4
Pp3c5_22420 Physcomitrium patens HOM05D004223 ORTHO05D004792 3.4e-33 146.4 239 38.5
ClCG03G006980 Citrullus lanatus HOM05D004223 ORTHO05D004792 7.7e-33 145.2 332 35.2
SMO296G0001 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 2.2e-32 143.7 260 36.5
Duzib138G1261 Durio zibethinus HOM05D004223 ORTHO05D004792 3.8e-32 142.9 149 51.7
FAN14G4329 Fragaria x ananassa HOM05D004223 ORTHO05D004792 3.2e-31 139.8 272 37.9
CiPaw.09G126400 Carya illinoinensis HOM05D004223 ORTHO05D004792 9.4e-31 138.3 156 51.9
CsaV3_1G032560 Cucumis sativus L. HOM05D004223 ORTHO05D004792 4.7e-30 136.0 213 44.6
MBI10_g27412_MAGBIO Magnolia biondii HOM05D004223 ORTHO05D004792 7.9e-30 135.2 171 46.8
SMO174G0155 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 7.9e-30 135.2 277 33.2
Pp3c25_8320 Physcomitrium patens HOM05D004223 ORTHO05D004792 1.1e-28 131.3 235 35.3
Actinidia39561 Actinidia chinensis HOM05D004223 ORTHO05D004792 3.1e-26 123.2 265 37.4
unitig_37.g12105 Utricularia gibba HOM05D004223 ORTHO05D004792 3.1e-26 123.2 149 43.6
Oeu040113.1 Olea europaea HOM05D004223 ORTHO05D004792 2.6e-25 120.2 127 48.0
Haze_13521 Corylus avellana HOM05D004223 ORTHO05D004792 6.5e-24 115.5 109 56.0
Haze_05551 Corylus avellana HOM05D004223 ORTHO05D004792 1.9e-23 114.0 123 48.0
CSS0012222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 8.0e-22 108.6 109 54.1
CDE02G0113 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 3.1e-18 96.7 121 43.8
SalBow7G0638 Salvia bowleyana HOM05D004223 ORTHO05D004792 3.5e-17 93.2 113 49.6
CSS0013327 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 1.1e-15 88.2 109 48.6
FAN05G0022 Fragaria x ananassa HOM05D004223 ORTHO05D004792 3.2e-15 86.7 234 34.2
Dinv05253 Davidia involucrata HOM05D004223 ORTHO05D004792 2.3e-13 80.5 133 42.1
Dinv05252 Davidia involucrata HOM05D004223 ORTHO05D004792 8.8e-13 78.6 72 58.3
CSS0014222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 4.5e-09 66.2 54 57.4
QL05p059167 Quercus lobata HOM05D004223 ORTHO05D004792 2.2e-08 63.9 95 38.9
unitig_37.g12104 Utricularia gibba HOM05D004223 ORTHO05D004792 1.5e-07 61.2 108 38.9
Actinidia22922 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.2e-06 58.2 82 50.0


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