Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 5.7e-192 674.1 345 100.0
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 1.3e-143 513.5 337 74.8
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 1.1e-142 510.4 332 75.3
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 9.3e-142 507.3 337 74.2
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 1.6e-141 506.5 337 73.6
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 6.0e-141 504.6 340 75.0
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 3.0e-140 502.3 337 74.8
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 6.7e-140 501.1 329 74.5
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 4.3e-139 498.4 347 73.8
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 5.6e-139 498.0 329 74.2
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 8.1e-138 494.2 338 74.3
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 2.0e-136 489.6 338 73.1
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 3.2e-134 482.3 348 70.4
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 4.2e-134 481.9 346 72.3
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 4.2e-134 481.9 340 71.5
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 5.5e-134 481.5 337 70.3
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 9.3e-134 480.7 370 65.7
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 2.1e-133 479.6 339 71.4
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 2.7e-133 479.2 332 71.1
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 1.3e-132 476.9 339 71.1
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 3.9e-132 475.3 341 70.4
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 8.7e-132 474.2 339 70.2
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 1.5e-131 473.4 339 69.3
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 6.3e-130 468.0 338 69.2
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 8.2e-130 467.6 341 69.8
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 1.8e-129 466.5 338 69.8
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 2.4e-129 466.1 355 68.5
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 3.1e-129 465.7 355 68.5
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 4.1e-129 465.3 340 70.9
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 1.2e-128 463.8 334 71.0
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 1.2e-128 463.8 345 69.3
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 4.5e-128 461.8 333 70.9
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 5.9e-128 461.5 339 68.7
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 7.6e-128 461.1 338 69.8
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 1.0e-127 460.7 357 67.5
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 1.0e-127 460.7 337 68.5
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 1.3e-127 460.3 338 69.2
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 1.7e-127 459.9 344 67.7
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 1.7e-127 459.9 344 67.7
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 2.2e-127 459.5 340 66.8
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 5.0e-127 458.4 344 67.7
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 5.0e-127 458.4 334 70.4
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 8.5e-127 457.6 344 66.9
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 1.1e-126 457.2 344 66.6
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 7.2e-126 454.5 336 69.6
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 1.2e-125 453.8 338 67.5
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 1.2e-125 453.8 338 69.5
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 6.1e-125 451.4 334 69.8
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 7.9e-125 451.1 343 68.2
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 3.9e-124 448.7 349 66.2
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 1.9e-123 446.4 338 69.2
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 4.3e-123 445.3 332 67.5
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-122 443.4 335 67.2
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 2.2e-122 443.0 359 65.2
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 4.1e-121 438.7 348 67.0
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 5.3e-121 438.3 351 63.8
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 6.9e-121 438.0 351 63.5
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 1.5e-120 436.8 337 66.8
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 2.0e-120 436.4 339 66.7
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 3.4e-120 435.6 330 65.5
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 3.4e-120 435.6 305 71.1
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 4.5e-120 435.3 340 65.3
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 4.5e-120 435.3 333 67.6
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 1.1e-118 430.6 367 64.0
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 1.9e-118 429.9 362 61.9
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 1.6e-117 426.8 336 67.6
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 6.1e-117 424.9 328 66.8
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 1.8e-116 423.3 344 65.7
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 3.9e-116 422.2 327 66.4
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 1.2e-112 410.6 329 65.3
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 2.0e-112 409.8 340 63.8
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 1.2e-109 400.6 335 65.7
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 4.7e-109 398.7 307 67.8
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 7.9e-109 397.9 303 68.3
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 3.0e-108 396.0 352 59.9
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 8.8e-108 394.4 274 71.5
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.1e-107 394.0 346 63.3
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 1.5e-107 393.7 342 63.7
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 3.3e-107 392.5 342 64.0
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 6.3e-106 388.3 312 62.8
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 8.2e-106 387.9 333 60.4
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 1.1e-105 387.5 303 67.7
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 7.0e-105 384.8 347 59.9
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 1.3e-103 380.6 265 70.2
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 2.1e-101 373.2 272 69.1
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 8.8e-100 367.9 336 61.0
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 8.8e-100 367.9 318 61.0
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 3.3e-99 365.9 348 59.5
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 1.7e-95 353.6 406 50.0
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 1.9e-94 350.1 347 57.1
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.4e-92 344.0 332 57.8
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 3.0e-92 342.8 257 67.7
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 1.7e-90 337.0 332 59.3
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 3.1e-89 332.8 278 64.4
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 1.3e-87 327.4 226 71.7
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 2.2e-87 326.6 397 48.4
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 3.2e-86 322.8 234 69.7
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 7.5e-83 311.6 231 69.7
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 1.0e-79 301.2 248 64.5
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 2.9e-74 283.1 311 50.2
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 1.6e-72 277.3 333 47.7
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 2.5e-70 270.0 182 71.4
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 1.6e-69 267.3 311 48.6
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 3.2e-65 253.1 184 67.9
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 1.6e-64 250.8 188 69.7
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 5.6e-62 242.3 250 53.6
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 4.0e-60 236.1 285 45.3
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 2.4e-57 226.9 313 42.5
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 1.2e-51 208.0 265 49.1
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 2.6e-35 153.7 95 78.9
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 6.7e-31 139.0 106 63.2
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 3.1e-28 130.2 75 82.7
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 9.0e-28 128.6 101 62.4
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 1.4e-25 121.3 293 31.4
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 9.3e-25 118.6 91 65.9
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 1.3e-23 114.8 91 64.8
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 1.1e-20 105.1 261 33.3
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 2.6e-19 100.5 60 81.7
Lsat_1_v5_gn_2_38761 Lactuca sativa HOM05D006699 ORTHO05D008399 4.2e-17 93.2 72 66.7
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 2.7e-16 90.5 195 32.8
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 3.1e-12 77.0 49 75.5
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 3.1e-12 77.0 49 75.5
TPR.G33085 Trifolium pratense HOM05D006699 ORTHO05D008399 6.1e-08 62.8 41 70.7
SMO338G0026 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 1.8e-07 61.2 190 29.5
Mapoly0094s0013 Marchantia polymorpha HOM05D005386 ORTHO05D006981 1.5e-06 58.2 236 24.6
HanXRQChr06g0183931 Helianthus annuus HOM05D005386 ORTHO05D006981 9.7e-06 55.5 151 27.2


User provided reference genes

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