Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01834 Eucalyptus grandis HOM05D006085 ORTHO05D007559 2.5e-256 888.3 445 100.0
PGR042G2089 Punica granatum HOM05D006085 ORTHO05D007559 1.7e-172 609.8 447 67.8
Duzib052G1056 Durio zibethinus HOM05D006085 ORTHO05D007559 4.8e-167 591.7 436 66.3
Thecc.02G182800 Theobroma cacao HOM05D006085 ORTHO05D007559 2.7e-165 585.9 436 65.6
TWI59G1154 Tripterygium wilfordii HOM05D006085 ORTHO05D007559 1.7e-164 583.2 447 64.2
GSVIVG01020577001 Vitis vinifera HOM05D006085 ORTHO05D007559 4.2e-163 578.6 447 64.0
CSS0044112 Camellia sinensis var. sinensis HOM05D006085 ORTHO05D007559 4.7e-162 575.1 447 63.8
Actinidia30466 Actinidia chinensis HOM05D006085 ORTHO05D007559 1.4e-161 573.5 447 64.2
Nn1g04152 Nelumbo nucifera HOM05D006085 ORTHO05D007559 1.4e-161 573.5 436 64.4
CsaV3_7G005870 Cucumis sativus L. HOM05D006085 ORTHO05D007559 4.4e-160 568.5 439 62.4
Glyma.12G116400 Glycine max HOM05D006085 ORTHO05D007559 9.8e-160 567.4 447 62.2
QL08p039688 Quercus lobata HOM05D006085 ORTHO05D007559 1.3e-159 567.0 435 63.9
TAR626G0071 Trochodendron aralioides HOM05D006085 ORTHO05D007559 1.3e-159 567.0 434 65.0
Lj8C109T7 Lonicera japonica HOM05D006085 ORTHO05D007559 1.7e-159 566.6 447 62.0
Glyma.06G290500 Glycine max HOM05D006085 ORTHO05D007559 4.8e-159 565.1 447 61.5
CiPaw.03G179300 Carya illinoinensis HOM05D006085 ORTHO05D007559 6.3e-159 564.7 436 64.4
Haze_13204 Corylus avellana HOM05D006085 ORTHO05D007559 1.1e-158 563.9 449 63.0
Lalb_Chr19g0135161 Lupinus albus HOM05D006085 ORTHO05D007559 3.1e-158 562.4 456 61.0
Gohir.A13G055500 Gossypium hirsutum HOM05D006085 ORTHO05D007559 4.1e-158 562.0 436 64.0
Rhsim06G0139100 Rhododendron simsii HOM05D006085 ORTHO05D007559 4.1e-158 562.0 473 60.3
Gorai.013G075800 Gossypium raimondii HOM05D006085 ORTHO05D007559 9.1e-158 560.8 436 63.8
Gohir.D13G066600 Gossypium hirsutum HOM05D006085 ORTHO05D007559 2.7e-157 559.3 436 63.5
MELO3C018706.2 Cucumis melo HOM05D006085 ORTHO05D007559 5.9e-157 558.1 451 60.8
MD17G1236100 Malus domestica HOM05D006085 ORTHO05D007559 1.9e-155 553.1 446 62.6
CANSAT64G0553 Cannabis sativa HOM05D006085 ORTHO05D007559 2.5e-155 552.7 435 62.1
Potri.007G139000 Populus trichocarpa HOM05D006085 ORTHO05D007559 3.3e-155 552.4 447 62.2
Ca_18934_v3 Cicer arietinum L. HOM05D006085 ORTHO05D007559 7.2e-155 551.2 447 61.5
Hma1.2p1_0002F.1_g002100 Hydrangea macrophylla HOM05D006085 ORTHO05D007559 7.2e-155 551.2 440 61.4
Atru.chr6.2894 Acer truncatum HOM05D006085 ORTHO05D007559 1.2e-154 550.4 437 62.5
Lj3g0015664 Lotus japonicus HOM05D006085 ORTHO05D007559 1.6e-154 550.1 447 60.6
RcHm_v2.0_Chr2g0127641 Rosa chinensis HOM05D006085 ORTHO05D007559 2.1e-154 549.7 446 61.4
MSTRG.15247 Avicennia marina HOM05D006085 ORTHO05D007559 1.0e-153 547.4 438 62.1
Ciclev10014891m.g Citrus clementina HOM05D006085 ORTHO05D007559 2.0e-152 543.1 435 61.6
Manes.13G147400 Manihot esculenta HOM05D006085 ORTHO05D007559 4.4e-152 542.0 447 59.1
AT2G20635 Arabidopsis thaliana HOM05D006085 ORTHO05D007559 1.3e-151 540.4 437 61.1
Sc12g0003150 Simmondsia chinensis HOM05D006085 ORTHO05D007559 1.1e-150 537.3 447 60.4
Medtr4g078555 Medicago truncatula HOM05D006085 ORTHO05D007559 2.4e-150 536.2 439 60.1
AL3G53720 Arabidopsis lyrata HOM05D006085 ORTHO05D007559 3.1e-150 535.8 435 60.7
Phvul.011G125900 Phaseolus vulgaris HOM05D006085 ORTHO05D007559 3.1e-150 535.8 449 59.0
FvH4_6g26520 Fragaria vesca HOM05D006085 ORTHO05D007559 5.4e-150 535.0 446 60.1
Hund01031 Selenicereus undatus HOM05D006085 ORTHO05D007559 7.0e-150 534.6 442 61.3
Sp3g33890 Schrenkiella parvula HOM05D006085 ORTHO05D007559 9.2e-150 534.3 439 60.1
Sabra07G0112000 Salix brachista HOM05D006085 ORTHO05D007559 1.2e-149 533.9 447 61.5
Psat7g168600 Pisum sativum HOM05D006085 ORTHO05D007559 2.7e-149 532.7 439 59.7
Migut.M00167 Erythranthe guttata HOM05D006085 ORTHO05D007559 5.9e-149 531.6 434 61.8
THA.LOC104804055 Tarenaya hassleriana HOM05D006085 ORTHO05D007559 3.9e-148 528.9 437 59.7
Aqoxy1G02363 Aquilegia oxysepala HOM05D006085 ORTHO05D007559 6.6e-148 528.1 435 59.8
CARHR111290 Cardamine hirsuta HOM05D006085 ORTHO05D007559 4.3e-147 525.4 435 59.5
SGA_v2.0_scaffold70G23511 Striga asiatica HOM05D006085 ORTHO05D007559 2.1e-146 523.1 436 58.0
BcaB08g34934 Brassica carinata HOM05D006085 ORTHO05D007559 4.7e-146 521.9 436 60.1
Carub.0003s3516 Capsella rubella HOM05D006085 ORTHO05D007559 1.4e-145 520.4 435 59.3
Prupe.3G189400 Prunus persica HOM05D006085 ORTHO05D007559 1.4e-145 520.4 444 59.7
CAN.G209.32 Capsicum annuum HOM05D006085 ORTHO05D007559 3.1e-145 519.2 437 60.2
Thhalv10001957m.g Eutrema salsugineum HOM05D006085 ORTHO05D007559 4.0e-145 518.8 437 58.6
Lsat_1_v5_gn_4_66841 Lactuca sativa HOM05D006085 ORTHO05D007559 8.9e-145 517.7 445 57.5
arahy.Tifrunner.gnm1.ann1.C4PCKW Arachis hypogaea HOM05D006085 ORTHO05D007559 2.0e-144 516.5 460 56.1
MBI18_g34208_MAGBIO Magnolia biondii HOM05D006085 ORTHO05D007559 2.6e-144 516.2 434 61.5
Sopen07g027790 Solanum pennellii HOM05D006085 ORTHO05D007559 1.7e-143 513.5 437 59.3
Solyc07g053820.3 Solanum lycopersicum HOM05D006085 ORTHO05D007559 2.9e-143 512.7 437 59.0
Aa31LG8G17530 Aethionema arabicum HOM05D006085 ORTHO05D007559 2.4e-142 509.6 437 58.1
ClCG07G002490 Citrullus lanatus HOM05D006085 ORTHO05D007559 2.4e-142 509.6 436 58.5
PGSC0003DMG400032825 Solanum tuberosum HOM05D006085 ORTHO05D007559 4.1e-142 508.8 437 58.8
ATR0217G009 Amborella trichopoda HOM05D006085 ORTHO05D007559 9.2e-142 507.7 436 56.9
HanXRQChr10g0284071 Helianthus annuus HOM05D006085 ORTHO05D007559 1.2e-141 507.3 435 59.1
vmacro12328 Vaccinium macrocarpon HOM05D006085 ORTHO05D007559 4.6e-141 505.4 378 64.0
BcaC07g41200 Brassica carinata HOM05D006085 ORTHO05D007559 1.0e-140 504.2 453 57.2
AUR62038885 Chenopodium quinoa HOM05D006085 ORTHO05D007559 1.0e-140 504.2 438 57.3
C08p42090 Brassica napus HOM05D006085 ORTHO05D007559 1.7e-140 503.4 453 57.2
BraA09t41263Z Brassica rapa HOM05D006085 ORTHO05D007559 2.3e-140 503.1 447 57.9
PSO675G5281 Papaver somniferum HOM05D006085 ORTHO05D007559 1.9e-139 500.0 433 56.6
ECA234G4181 Erigeron canadensis HOM05D006085 ORTHO05D007559 4.3e-139 498.8 436 57.8
Oeu036070.3 Olea europaea HOM05D006085 ORTHO05D007559 1.2e-138 497.3 394 61.4
A09p58770 Brassica napus HOM05D006085 ORTHO05D007559 8.0e-138 494.6 464 55.8
VMungo1127G1010 Vigna mungo HOM05D006085 ORTHO05D007559 1.8e-137 493.4 447 55.9
PSO541G4164 Papaver somniferum HOM05D006085 ORTHO05D007559 3.1e-137 492.7 433 55.9
Peaxi162Scf00981g00430 Petunia axillaris HOM05D006085 ORTHO05D007559 3.4e-136 489.2 472 53.8
HPP92_014185 Vanilla planifolia HOM05D006085 ORTHO05D007559 4.6e-133 478.8 428 55.6
AUR62038975 Chenopodium quinoa HOM05D006085 ORTHO05D007559 1.0e-132 477.6 487 51.1
Sed0017729 Sechium edule HOM05D006085 ORTHO05D007559 1.5e-131 473.8 376 60.9
COL.COLO4_05950 Corchorus olitorius HOM05D006085 ORTHO05D007559 9.5e-131 471.1 436 56.7
Os07g0508500 Oryza sativa ssp. japonica HOM05D006085 ORTHO05D007559 3.1e-129 466.1 434 53.7
DCAR_021253 Daucus carota HOM05D006085 ORTHO05D007559 4.9e-127 458.8 503 50.1
Ah.01g015320 Amaranthus hybridus HOM05D006085 ORTHO05D007559 1.1e-126 457.6 438 53.2
Manes.13G145916 Manihot esculenta HOM05D006085 ORTHO05D007559 5.4e-126 455.3 446 52.2
Zm00001eb322380 Zea mays HOM05D006085 ORTHO05D007559 1.0e-124 451.1 437 53.8
Cpa.g.sc83.67 Carica papaya HOM05D006085 ORTHO05D007559 3.9e-124 449.1 447 53.2
CDE04G1826 Ceratophyllum demersum HOM05D006085 ORTHO05D007559 1.1e-121 441.0 384 57.6
BolC8t51769H Brassica oleracea HOM05D006085 ORTHO05D007559 2.4e-121 439.9 453 53.0
FAN02G0764 Fragaria x ananassa HOM05D006085 ORTHO05D007559 4.0e-121 439.1 320 64.7
arahy.Tifrunner.gnm1.ann1.RY71RI Arachis hypogaea HOM05D006085 ORTHO05D007559 5.4e-118 428.7 434 52.1
arahy.Tifrunner.gnm1.ann1.9UNY9A Arachis hypogaea HOM05D006085 ORTHO05D007559 1.0e-116 424.5 428 51.9
arahy.Tifrunner.gnm1.ann1.UWD03M Arachis hypogaea HOM05D006085 ORTHO05D007559 3.3e-115 419.5 417 53.0
Prupe.3G139600 Prunus persica HOM05D006085 ORTHO05D007559 7.3e-115 418.3 309 65.0
Cc05_g07490 Coffea canephora HOM05D006085 ORTHO05D007559 4.0e-105 386.0 340 58.2
Nitab4.5_0001752g0030 Nicotiana tabacum HOM05D006085 ORTHO05D007559 7.6e-104 381.7 437 47.4
Pp3c20_12130 Physcomitrium patens HOM05D006085 ORTHO05D007559 2.1e-98 363.6 382 48.4
Nitab4.5_0000638g0100 Nicotiana tabacum HOM05D006085 ORTHO05D007559 7.6e-96 355.1 333 55.0
AagrBONN_evm.TU.Sc2ySwM_228.5266 Anthoceros agrestis HOM05D006085 ORTHO05D007559 4.2e-94 349.4 353 48.4
Mapoly0009s0056 Marchantia polymorpha HOM05D006085 ORTHO05D007559 3.0e-92 343.2 361 48.2
Manes.13G145813 Manihot esculenta HOM05D006085 ORTHO05D007559 2.6e-80 303.5 201 68.2
unitig_21.g20425 Utricularia gibba HOM05D006085 ORTHO05D007559 7.7e-80 302.0 402 42.3
Manes.13G145816 Manihot esculenta HOM05D006085 ORTHO05D007559 4.2e-78 296.2 208 65.9
Manes.13G145812 Manihot esculenta HOM05D006085 ORTHO05D007559 1.1e-70 271.6 166 71.7
TPR.G31028 Trifolium pratense HOM05D006085 ORTHO05D007559 1.7e-63 247.7 454 36.8
CBR_g48499 Chara braunii HOM05D006085 ORTHO05D007559 2.7e-61 240.4 392 35.5
TPR.G23020 Trifolium pratense HOM05D006085 ORTHO05D007559 5.0e-47 193.0 132 67.4
MCO16G047 Micromonas commoda HOM05D006085 ORTHO05D007559 2.1e-45 187.6 318 34.0
Cc00_g12330 Coffea canephora HOM05D006085 ORTHO05D007559 3.6e-45 186.8 173 54.9
TPR.G6860 Trifolium pratense HOM05D006085 ORTHO05D007559 6.6e-39 166.0 154 55.2
Duzib132G0978 Durio zibethinus HOM05D006085 ORTHO05D007559 8.9e-36 155.6 209 44.5
Cc00_g12340 Coffea canephora HOM05D006085 ORTHO05D007559 2.7e-24 117.5 236 36.9
Cc05_g07480 Coffea canephora HOM05D006085 ORTHO05D007559 1.1e-22 112.1 86 64.0
Nitab4.5_0000638g0110 Nicotiana tabacum HOM05D006085 ORTHO05D007559 9.5e-22 109.0 86 57.0
TPR.G107 Trifolium pratense HOM05D006085 ORTHO05D007559 4.7e-21 106.7 67 71.6
TPR.G28910 Trifolium pratense HOM05D006085 ORTHO05D007559 1.2e-19 102.1 62 75.8
SMO276G0023 Selaginella moellendorffii HOM05D006085 ORTHO05D007559 5.2e-12 76.6 138 37.0
MD09G1244300 Malus domestica HOM05D006085 ORTHO05D007559 2.6e-11 74.3 60 55.0


User provided reference genes

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