Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 2.0e-48 195.3 88 100.0
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 6.0e-45 183.7 88 90.9
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 7.8e-45 183.3 88 92.0
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 1.7e-44 182.2 88 93.2
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 1.7e-44 182.2 88 93.2
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 3.9e-44 181.0 88 90.9
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 3.9e-44 181.0 88 92.0
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 6.6e-44 180.3 85 91.8
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.5e-43 179.1 88 88.6
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.5e-43 179.1 88 88.6
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 1.5e-43 179.1 88 88.6
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 1.9e-43 178.7 88 90.9
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 2.5e-43 178.3 88 87.5
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.3e-43 177.6 87 88.5
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 5.6e-43 177.2 88 92.0
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 5.6e-43 177.2 87 88.5
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 7.3e-43 176.8 85 90.6
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 9.6e-43 176.4 88 88.6
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 9.6e-43 176.4 88 88.6
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 1.3e-42 176.0 88 88.6
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 1.6e-42 175.6 88 88.6
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 2.1e-42 175.3 85 89.4
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 2.8e-42 174.9 88 87.5
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.6e-42 174.5 86 87.2
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 3.6e-42 174.5 88 88.6
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 4.8e-42 174.1 88 92.0
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 4.8e-42 174.1 85 89.4
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 6.2e-42 173.7 88 89.8
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 6.2e-42 173.7 87 85.1
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 6.2e-42 173.7 88 90.9
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 6.2e-42 173.7 88 85.2
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 8.1e-42 173.3 88 87.5
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 8.1e-42 173.3 88 88.6
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 1.1e-41 172.9 82 90.2
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 1.4e-41 172.6 88 87.5
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.4e-41 172.6 88 87.5
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 1.4e-41 172.6 83 89.2
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 1.8e-41 172.2 83 89.2
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 2.4e-41 171.8 87 90.8
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 2.4e-41 171.8 88 89.8
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 3.1e-41 171.4 85 88.2
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 3.1e-41 171.4 88 89.8
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 3.1e-41 171.4 88 87.5
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 3.1e-41 171.4 88 87.5
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 3.1e-41 171.4 88 89.8
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 3.1e-41 171.4 88 89.8
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 3.1e-41 171.4 83 88.0
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 4.0e-41 171.0 87 89.7
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 4.0e-41 171.0 87 89.7
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 4.0e-41 171.0 88 83.0
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 9.0e-41 169.9 88 88.6
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 9.0e-41 169.9 88 88.6
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 9.0e-41 169.9 87 88.5
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 9.0e-41 169.9 88 88.6
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 9.0e-41 169.9 87 88.5
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 9.0e-41 169.9 87 88.5
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 9.0e-41 169.9 88 88.6
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 9.0e-41 169.9 88 86.4
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 1.5e-40 169.1 88 85.2
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 1.5e-40 169.1 88 85.2
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 4.5e-40 167.5 83 86.7
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 5.8e-40 167.2 82 87.8
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 7.6e-40 166.8 85 85.9
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 7.6e-40 166.8 85 85.9
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 7.6e-40 166.8 85 85.9
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 7.6e-40 166.8 85 85.9
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 7.6e-40 166.8 90 85.6
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 1.7e-39 165.6 87 82.8
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 1.7e-39 165.6 82 86.6
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 1.7e-39 165.6 88 86.4
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 1.7e-39 165.6 89 85.4
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 2.2e-39 165.2 83 85.5
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 2.2e-39 165.2 87 87.4
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 3.8e-39 164.5 84 86.9
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 3.8e-39 164.5 88 85.2
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 4.9e-39 164.1 82 87.8
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 6.4e-39 163.7 84 84.5
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 6.4e-39 163.7 87 81.6
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 1.1e-38 162.9 83 83.1
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.1e-38 162.9 88 85.2
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 1.9e-38 162.2 85 84.7
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 7.1e-38 160.2 86 82.6
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 7.1e-38 160.2 84 84.5
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 7.1e-38 160.2 84 84.5
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 1.6e-37 159.1 87 83.9
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 2.7e-37 158.3 88 80.7
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 2.7e-37 158.3 81 86.4
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 3.5e-37 157.9 84 84.5
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 7.9e-37 156.8 83 84.3
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.8e-36 155.6 87 81.6
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 1.8e-36 155.6 109 68.8
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 2.3e-36 155.2 77 85.7
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 3.9e-36 154.5 87 80.5
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 5.1e-36 154.1 82 80.5
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 8.1e-34 146.7 78 80.8
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.8e-33 145.6 87 75.9
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.4e-32 141.4 68 88.2
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 1.3e-31 139.4 88 77.3
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 9.3e-30 133.3 65 90.8
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 9.3e-30 133.3 61 93.4
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.7e-29 131.7 62 91.9
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 3.5e-29 131.3 64 89.1
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 9.6e-27 123.2 61 82.0
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 7.1e-22 107.1 52 86.5
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 1.3e-20 102.8 50 88.0
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 8.2e-18 93.6 64 62.5
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.1e-14 83.2 38 94.7
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 3.2e-14 81.6 61 57.4
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.2e-14 81.3 40 87.5
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 1.2e-13 79.7 58 60.3
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.0e-12 76.6 40 80.0
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 1.8e-12 75.9 42 83.3
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 2.5e-11 72.0 41 78.0


User provided reference genes

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