Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 9.3e-156 553.5 282 100.0
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 6.3e-88 328.2 236 73.7
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 2.7e-86 322.8 236 72.0
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 3.5e-86 322.4 237 72.6
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 2.9e-85 319.3 236 73.3
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 5.0e-85 318.5 200 81.5
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 1.1e-84 317.4 213 76.1
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 1.1e-84 317.4 197 80.2
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 1.1e-84 317.4 212 77.4
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 1.5e-84 317.0 189 83.1
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 1.5e-84 317.0 241 71.8
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 2.5e-84 316.2 236 72.5
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 5.5e-84 315.1 217 74.2
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 1.2e-83 313.9 178 85.4
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 1.6e-83 313.5 205 78.0
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 1.6e-83 313.5 241 70.1
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 1.6e-83 313.5 236 71.2
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 1.6e-83 313.5 221 74.7
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 2.1e-83 313.2 195 80.5
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 2.1e-83 313.2 189 79.9
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 8.0e-83 311.2 262 65.6
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 8.0e-83 311.2 191 80.1
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.4e-82 310.5 236 71.6
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 1.4e-82 310.5 211 75.8
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 1.4e-82 310.5 178 85.4
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 1.4e-82 310.5 178 85.4
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 2.3e-82 309.7 223 72.6
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 3.0e-82 309.3 242 69.0
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 4.0e-82 308.9 218 74.8
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 6.8e-82 308.1 216 73.6
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 1.5e-81 307.0 236 69.5
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 2.0e-81 306.6 214 74.3
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 2.0e-81 306.6 238 70.2
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 2.0e-81 306.6 192 79.2
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 2.0e-81 306.6 217 73.3
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 2.6e-81 306.2 177 84.2
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 4.4e-81 305.4 223 73.1
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 5.7e-81 305.1 187 81.3
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 5.7e-81 305.1 225 71.6
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 7.5e-81 304.7 243 67.5
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 7.5e-81 304.7 236 70.3
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 7.5e-81 304.7 178 83.1
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 7.5e-81 304.7 218 73.9
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 9.8e-81 304.3 242 68.6
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 9.8e-81 304.3 214 73.8
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 2.2e-80 303.1 188 80.3
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 2.2e-80 303.1 229 70.7
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 6.3e-80 301.6 222 72.5
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 6.3e-80 301.6 195 77.9
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 6.3e-80 301.6 214 74.8
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 8.3e-80 301.2 188 80.9
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 8.3e-80 301.2 201 75.6
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 1.1e-79 300.8 197 78.2
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 1.1e-79 300.8 220 70.9
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 1.4e-79 300.4 188 80.9
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 1.4e-79 300.4 241 68.0
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 1.4e-79 300.4 215 71.2
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 2.4e-79 299.7 239 66.9
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 4.1e-79 298.9 202 76.2
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 4.1e-79 298.9 233 67.4
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 5.4e-79 298.5 236 67.4
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 7.0e-79 298.1 221 71.5
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 1.2e-78 297.4 196 78.1
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 2.0e-78 296.6 207 73.4
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 2.7e-78 296.2 221 71.0
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 2.7e-78 296.2 221 71.0
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 2.7e-78 296.2 190 80.5
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 4.5e-78 295.4 228 67.5
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 7.7e-78 294.7 218 70.2
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 2.3e-77 293.1 223 72.2
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 3.8e-77 292.4 214 72.4
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 6.6e-77 291.6 187 75.4
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 1.9e-76 290.0 222 70.7
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 2.5e-76 289.7 217 69.1
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 3.3e-76 289.3 193 76.2
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 7.2e-76 288.1 219 70.3
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 7.2e-76 288.1 152 90.1
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 9.5e-76 287.7 166 83.7
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 1.2e-75 287.3 178 78.1
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 2.1e-75 286.6 219 69.4
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 4.7e-75 285.4 228 66.2
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 6.1e-75 285.0 172 79.1
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 1.8e-74 283.5 152 87.5
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 5.2e-74 282.0 152 87.5
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 5.7e-73 278.5 329 51.7
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 3.7e-72 275.8 204 66.7
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 4.9e-72 275.4 189 75.1
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 1.1e-71 274.2 258 61.2
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 7.8e-70 268.1 225 64.0
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 5.0e-69 265.4 208 69.7
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 2.5e-68 263.1 185 68.6
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 2.8e-67 259.6 233 60.1
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 8.3e-64 248.1 166 72.9
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 1.1e-63 247.7 146 78.1
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 2.5e-60 236.5 249 52.6
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 8.1e-59 231.5 157 70.1
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 1.1e-58 231.1 119 89.1
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 7.8e-54 214.9 208 55.3
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 1.3e-53 214.2 119 79.8
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 1.7e-53 213.8 244 48.0
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 6.8e-50 201.8 119 75.6
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 1.7e-48 197.2 177 54.2
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 2.2e-48 196.8 218 49.5
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 4.7e-43 179.1 118 71.2
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 8.1e-43 178.3 115 76.5
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 8.1e-43 178.3 115 76.5
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 1.4e-42 177.6 94 87.2
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 4.0e-42 176.0 194 53.1
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 7.1e-31 138.7 104 68.3
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 1.2e-25 121.3 66 87.9
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 1.7e-24 117.5 68 79.4
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 3.7e-19 99.8 186 33.9
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 5.8e-17 92.4 129 33.3
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.3e-16 91.3 61 73.8
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 8.4e-16 88.6 48 83.3
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 3.5e-14 83.2 127 49.6
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 1.9e-12 77.4 128 30.5
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 5.7e-12 75.9 58 70.7
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 2.9e-08 63.5 121 28.9
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 5.0e-08 62.8 195 26.2
MD04G1093800 Malus domestica HOM05D006544 ORTHO05D247365 3.2e-07 60.1 35 80.0


User provided reference genes

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