Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 5.9e-152 540.8 270 100.0
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 1.6e-96 356.7 271 71.6
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 8.7e-95 350.9 247 73.3
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 1.9e-94 349.7 270 70.0
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 7.4e-94 347.8 201 83.6
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 9.6e-94 347.4 219 79.5
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 2.1e-93 346.3 241 75.1
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 6.2e-93 344.7 274 68.6
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 2.4e-92 342.8 220 79.1
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 4.1e-92 342.0 192 87.0
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 4.1e-92 342.0 178 92.1
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 6.9e-92 341.3 179 90.5
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 6.9e-92 341.3 179 90.5
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.2e-91 340.5 221 76.0
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 1.5e-91 340.1 179 90.5
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.6e-91 339.3 219 78.1
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 4.5e-91 338.6 193 84.5
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 1.7e-90 336.7 271 66.4
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 2.2e-90 336.3 179 88.8
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 2.2e-90 336.3 178 89.9
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 2.9e-90 335.9 245 73.5
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 6.5e-90 334.7 296 62.5
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 1.4e-89 333.6 276 66.7
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 1.9e-89 333.2 178 90.4
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 2.5e-89 332.8 216 78.7
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 2.5e-89 332.8 216 78.7
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 2.5e-89 332.8 178 88.2
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 3.2e-89 332.4 225 74.7
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 9.3e-89 330.9 273 68.5
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 9.3e-89 330.9 194 83.5
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.2e-88 330.5 179 89.4
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.2e-88 330.5 179 89.4
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 2.1e-88 329.7 257 68.5
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 2.7e-88 329.3 180 86.7
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 2.7e-88 329.3 179 88.3
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 6.1e-88 328.2 179 87.2
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 7.9e-88 327.8 279 63.8
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 5.1e-87 325.1 251 68.1
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.5e-86 323.6 253 66.0
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 1.9e-86 323.2 195 81.5
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 2.2e-85 319.7 179 85.5
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 2.8e-85 319.3 178 85.4
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 3.7e-85 318.9 285 62.8
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 4.8e-85 318.5 178 84.8
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.1e-84 317.4 179 85.5
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 1.4e-84 317.0 255 66.7
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.4e-84 317.0 178 85.4
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 3.1e-84 315.8 245 66.5
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 4.1e-84 315.5 253 65.2
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 4.1e-84 315.5 230 69.1
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 6.9e-84 314.7 197 78.2
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 2.0e-83 313.2 258 65.9
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 2.0e-83 313.2 233 68.7
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 2.0e-83 313.2 180 85.0
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 2.0e-83 313.2 210 75.2
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 2.6e-83 312.8 180 85.0
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 2.6e-83 312.8 178 84.8
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.6e-83 312.8 251 66.9
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 3.4e-83 312.4 252 67.1
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 5.9e-83 311.6 178 84.8
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 7.7e-83 311.2 178 84.8
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 2.2e-82 309.7 227 69.6
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 3.8e-82 308.9 247 68.4
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 3.8e-82 308.9 246 67.1
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 5.0e-82 308.5 252 66.3
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 6.5e-82 308.1 252 66.7
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.4e-81 307.0 178 83.1
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.9e-81 306.6 186 79.0
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 4.2e-81 305.4 178 82.0
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 4.2e-81 305.4 180 82.2
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 1.0e-79 300.8 215 72.1
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 1.4e-79 300.4 177 81.4
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 3.3e-78 295.8 178 80.9
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 9.1e-76 287.7 153 88.2
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.0e-75 286.6 178 75.8
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 2.6e-75 286.2 176 77.8
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 2.2e-74 283.1 208 69.2
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 3.2e-73 279.3 251 60.2
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 9.4e-73 277.7 178 76.4
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 1.2e-72 277.3 275 57.8
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.1e-72 276.6 241 64.3
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 1.0e-71 274.2 179 76.0
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.8e-71 273.5 228 64.5
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.5e-67 260.4 237 60.3
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 1.1e-65 254.2 177 68.9
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 4.7e-64 248.8 179 67.6
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 6.1e-64 248.4 201 68.7
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 1.5e-62 243.8 271 52.0
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 4.4e-62 242.3 214 64.0
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 4.5e-59 232.3 123 91.9
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.2e-58 229.9 132 84.8
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 1.4e-52 210.7 117 82.9
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 4.7e-48 195.7 143 70.6
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 5.4e-44 182.2 150 60.7
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 3.5e-43 179.5 181 53.0
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 1.5e-41 174.1 94 86.2
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 1.6e-32 144.1 129 58.9
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.2e-30 137.9 75 86.7
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 9.2e-28 128.3 65 92.3
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 7.1e-20 102.1 58 84.5
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 6.2e-16 89.0 101 51.5


User provided reference genes

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