Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 4.8e-120 436.4 821 100.0
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 4.9e-40 170.6 212 49.1
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 6.4e-40 170.2 153 58.2
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 3.2e-39 167.9 220 47.7
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 7.1e-39 166.8 217 47.5
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 1.6e-38 165.6 155 54.8
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 2.1e-38 165.2 152 56.6
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 7.8e-38 163.3 151 56.3
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 1.0e-37 162.9 213 48.8
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 2.3e-37 161.8 153 55.6
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 5.1e-37 160.6 202 50.0
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.5e-36 158.3 153 54.9
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.3e-36 157.9 151 56.3
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 1.8e-34 152.1 132 59.1
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 4.0e-34 151.0 192 48.4
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 1.5e-33 149.1 151 49.7
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 2.9e-32 144.8 178 51.7
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 4.2e-31 141.0 123 60.2
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 4.6e-30 137.5 153 49.0
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 2.3e-29 135.2 155 46.5
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 1.3e-27 129.4 153 46.4
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 1.3e-27 129.4 215 41.4
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 1.3e-27 129.4 115 58.3
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 1.6e-27 129.0 158 44.9
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 8.1e-27 126.7 154 43.5
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 6.9e-26 123.6 177 65.0
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 1.2e-25 122.9 150 46.7
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 1.5e-25 122.5 150 42.7
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 2.0e-25 122.1 151 43.7
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 3.4e-25 121.3 152 42.1
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 3.4e-25 121.3 139 48.9
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 5.8e-25 120.6 124 53.2
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 9.9e-25 119.8 152 42.8
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 1.3e-24 119.4 152 42.8
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 2.9e-24 118.2 151 43.7
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 3.8e-24 117.9 200 39.5
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 3.8e-24 117.9 138 41.3
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 8.4e-24 116.7 149 43.0
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 1.1e-23 116.3 138 47.8
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 1.1e-23 116.3 150 41.3
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 3.2e-23 114.8 129 48.1
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 3.2e-23 114.8 149 43.6
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 2.1e-22 112.1 149 41.6
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 2.1e-22 112.1 125 47.2
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 2.7e-22 111.7 165 40.0
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 3.5e-22 111.3 149 41.6
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 4.6e-22 110.9 149 40.9
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 7.9e-22 110.2 149 42.3
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 1.0e-21 109.8 151 43.7
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 1.3e-21 109.4 210 38.6
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 1.8e-21 109.0 123 51.2
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 1.8e-21 109.0 151 42.4
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 3.9e-21 107.8 154 47.4
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 3.9e-21 107.8 180 44.4
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 3.9e-21 107.8 174 64.4
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 1.5e-20 105.9 132 46.2
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 3.3e-20 104.8 193 38.9
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 2.1e-19 102.1 148 38.5
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 4.8e-19 100.9 96 52.1
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 3.1e-18 98.2 148 37.2
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 4.0e-18 97.8 122 45.9
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 2.6e-17 95.1 155 39.4
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 1.7e-16 92.4 134 40.3
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 3.8e-16 91.3 176 58.0
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 8.4e-16 90.1 165 38.8
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 8.4e-16 90.1 153 38.6
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 1.4e-15 89.4 94 53.2
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 1.4e-15 89.4 172 36.0
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 4.2e-15 87.8 106 47.2
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 5.5e-15 87.4 174 62.1
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 9.3e-15 86.7 125 39.2
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.2e-14 86.3 178 57.9
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 1.6e-14 85.9 180 32.2
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 6.0e-14 84.0 125 40.8
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.0e-13 83.2 106 45.3
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 1.0e-13 83.2 106 45.3
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 1.3e-13 82.8 95 48.4
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 2.3e-13 82.0 163 58.9
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 3.0e-13 81.6 180 32.8
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 5.1e-13 80.9 114 43.0
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 5.1e-13 80.9 102 48.0
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 6.7e-13 80.5 126 39.7
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 5.7e-12 77.4 159 59.7
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 5.7e-12 77.4 159 59.7
Thhalv10015810m.g Eutrema salsugineum HOM05D007410 ORTHO05D009500 7.4e-12 77.0 93 39.8
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 8.2e-11 73.6 173 59.0
AL6G44470 Arabidopsis lyrata HOM05D007410 ORTHO05D009500 1.8e-10 72.4 80 42.5
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 3.1e-10 71.6 175 59.4
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 3.1e-10 71.6 158 58.2
TPR.G28359 Trifolium pratense HOM05D007410 ORTHO05D009500 3.4e-09 68.2 159 58.5
ECA233G1087 Erigeron canadensis HOM05D001398 ORTHO05D001467 1.0e-08 66.6 55 49.1
COL.COLO4_29826 Corchorus olitorius HOM05D007410 ORTHO05D009500 1.3e-08 66.2 69 44.9
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.3e-08 66.2 149 32.9
Thecc.05G080100 Theobroma cacao HOM05D007410 ORTHO05D009500 2.2e-08 65.5 55 58.2
Actinidia39878 Actinidia chinensis HOM05D007410 ORTHO05D009500 3.8e-08 64.7 58 48.3
HanXRQChr02g0058171 Helianthus annuus HOM05D007410 ORTHO05D009500 1.1e-07 63.2 139 59.0
Migut.A01169 Erythranthe guttata HOM05D007410 ORTHO05D009500 9.3e-07 60.1 171 53.8
Gohir.D04G161400 Gossypium hirsutum HOM05D006931 ORTHO05D008782 2.1e-06 58.9 130 30.8
Gorai.012G149400 Gossypium raimondii HOM05D006931 ORTHO05D008782 2.1e-06 58.9 130 30.8
Glyma.08G199100 Glycine max HOM05D006931 ORTHO05D008782 6.1e-06 57.4 121 33.1
Lj3g0013378 Lotus japonicus HOM05D006931 ORTHO05D008782 7.9e-06 57.0 125 31.2
Lj3g0024796 Lotus japonicus HOM05D006931 ORTHO05D008782 7.9e-06 57.0 125 31.2


User provided reference genes

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