Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 1.2e-40 169.5 87 100.0
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 1.7e-39 165.6 87 97.7
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 8.1e-10 67.0 95 47.4
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 1.1e-09 66.6 93 52.7
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 1.1e-09 66.6 92 48.9
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 1.8e-09 65.9 87 43.7
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 6.9e-09 63.9 97 49.5
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 9.0e-09 63.5 100 46.0
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 1.5e-08 62.8 89 48.3
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 2.0e-08 62.4 94 46.8
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 3.4e-08 61.6 89 48.3
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 5.8e-08 60.8 91 48.4
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 7.6e-08 60.5 94 44.7
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 7.6e-08 60.5 103 45.6
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 1.3e-07 59.7 87 48.3
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 1.3e-07 59.7 92 45.7
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.7e-07 59.3 107 41.1
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 6.4e-07 57.4 100 44.0
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 8.4e-07 57.0 99 40.4
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 8.4e-07 57.0 92 43.5
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 1.4e-06 56.2 88 45.5
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 1.9e-06 55.8 89 42.7
BcaC01g06288 Brassica carinata HOM05D011561 ORTHO05D011237 2.4e-06 55.5 92 45.7
BcaC01g06291 Brassica carinata HOM05D011561 ORTHO05D011237 2.4e-06 55.5 92 45.7
BolC3t14140H Brassica oleracea HOM05D011561 ORTHO05D011237 2.4e-06 55.5 92 45.7
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 2.4e-06 55.5 90 47.8
AT5G54165 Arabidopsis thaliana HOM05D011561 ORTHO05D011237 4.2e-06 54.7 90 44.4
AL8G29380 Arabidopsis lyrata HOM05D011561 ORTHO05D011237 5.4e-06 54.3 92 44.6
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 5.4e-06 54.3 91 45.1


User provided reference genes

Program Settings