Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 8.9e-41 169.9 87 100.0
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 9.8e-40 166.4 87 97.7
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 7.3e-11 70.5 92 52.2
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 9.6e-11 70.1 92 50.0
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 2.8e-10 68.6 95 47.4
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 4.8e-10 67.8 87 43.7
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 2.4e-09 65.5 97 49.5
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 4.0e-09 64.7 89 49.4
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.0e-09 64.7 100 46.0
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 5.3e-09 64.3 96 46.9
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.2e-08 63.2 106 44.3
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 1.5e-08 62.8 91 48.4
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 2.6e-08 62.0 94 46.8
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 3.4e-08 61.6 87 48.3
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 3.4e-08 61.6 89 47.2
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 4.4e-08 61.2 92 45.7
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 2.2e-07 58.9 99 42.4
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 2.2e-07 58.9 92 43.5
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 4.9e-07 57.8 88 45.5
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 1.1e-06 56.6 90 48.9
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.1e-06 56.6 102 43.1
BcaC01g06288 Brassica carinata HOM05D011561 ORTHO05D011237 1.4e-06 56.2 92 45.7
BcaC01g06291 Brassica carinata HOM05D011561 ORTHO05D011237 1.4e-06 56.2 92 45.7
BolC3t14140H Brassica oleracea HOM05D011561 ORTHO05D011237 1.4e-06 56.2 92 45.7
Nn1g00438 Nelumbo nucifera HOM05D008613 ORTHO05D006961 1.4e-06 56.2 91 45.1
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.4e-06 56.2 99 44.4
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 1.9e-06 55.8 94 43.6
AT5G54165 Arabidopsis thaliana HOM05D011561 ORTHO05D011237 2.4e-06 55.5 90 44.4
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 2.4e-06 55.5 91 45.1
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 3.2e-06 55.1 101 37.6
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 4.2e-06 54.7 89 40.4
BcaB01g04281 Brassica carinata HOM05D011561 ORTHO05D011237 7.1e-06 53.9 90 44.4
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 9.3e-06 53.5 86 45.3
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 9.3e-06 53.5 89 41.6


User provided reference genes

Program Settings