Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 8.3e-227 790.0 398 100.0
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 6.2e-89 332.0 388 48.5
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 5.2e-88 328.9 388 46.9
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 1.3e-86 324.3 402 46.0
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 1.7e-86 323.9 367 47.4
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 4.1e-85 319.3 374 45.2
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 1.2e-84 317.8 368 47.3
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 6.0e-84 315.5 375 46.1
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 7.8e-84 315.1 374 46.5
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 2.3e-83 313.5 382 44.2
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 3.0e-83 313.2 377 45.9
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 3.9e-83 312.8 410 43.7
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 3.3e-82 309.7 385 45.5
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 2.8e-81 306.6 377 45.4
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 1.4e-80 304.3 397 43.6
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 5.2e-80 302.4 374 45.2
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 8.9e-80 301.6 372 44.9
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 1.5e-79 300.8 377 45.6
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 4.9e-78 295.8 392 44.1
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 2.1e-76 290.4 372 43.3
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 2.7e-76 290.0 387 41.3
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 6.6e-75 285.4 409 39.6
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 1.1e-74 284.6 360 43.3
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.4e-72 276.9 357 43.7
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 4.4e-71 272.7 371 41.2
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 4.4e-71 272.7 357 43.1
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 2.4e-69 266.9 371 39.6
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 7.1e-69 265.4 371 40.7
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.1e-68 263.8 356 42.4
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 2.0e-63 247.3 373 39.1
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 2.0e-63 247.3 398 40.2
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 4.5e-63 246.1 378 39.9
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 9.9e-63 245.0 344 41.3
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 6.7e-59 232.3 210 51.0
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 1.9e-58 230.7 368 35.6
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 2.8e-57 226.9 370 36.2
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 4.8e-57 226.1 263 43.3
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.6e-55 220.3 290 45.5
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 3.4e-55 219.9 370 35.1
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 5.8e-55 219.2 352 38.6
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 7.6e-55 218.8 341 38.1
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 1.3e-54 218.0 369 35.2
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 1.7e-54 217.6 290 45.2
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 6.5e-54 215.7 371 34.5
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 8.4e-54 215.3 369 34.7
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 1.9e-53 214.2 396 36.4
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 2.5e-53 213.8 414 33.6
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 4.2e-53 213.0 371 38.3
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 1.6e-52 211.1 372 33.9
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 2.1e-52 210.7 389 33.2
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 4.6e-52 209.5 372 33.9
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 2.3e-51 207.2 368 34.5
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 2.3e-51 207.2 368 34.5
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 3.9e-51 206.5 368 33.7
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 5.1e-51 206.1 368 33.7
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 6.7e-51 205.7 370 33.0
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 5.7e-50 202.6 366 34.4
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.3e-49 201.4 365 35.9
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 2.9e-46 190.3 354 34.7
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 8.7e-43 178.7 369 33.1
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 4.5e-39 166.4 382 28.5
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 7.7e-39 165.6 365 32.6
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 1.4e-37 161.4 318 33.0
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 4.6e-36 156.4 327 33.0
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 4.6e-36 156.4 231 43.7
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 1.1e-34 151.8 370 29.7
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 1.9e-29 134.4 317 30.0
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 3.2e-29 133.7 219 40.2
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 6.5e-22 109.4 265 29.4
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 6.7e-19 99.4 217 30.4
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 5.7e-18 96.3 164 40.2
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 2.8e-17 94.0 139 43.2
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 2.8e-17 94.0 208 29.8
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 4.0e-11 73.6 154 37.0
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 7.5e-10 69.3 217 27.2
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 4.8e-09 66.6 176 33.5
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 6.3e-09 66.2 50 54.0


User provided reference genes

Program Settings