Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 6.4e-155 551.2 395 100.0
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 4.6e-36 156.4 292 42.1
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 2.8e-33 147.1 318 39.6
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 3.7e-33 146.7 296 40.5
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 3.4e-31 140.2 317 39.1
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 1.3e-30 138.3 297 41.4
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 1.3e-30 138.3 316 36.4
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 3.8e-30 136.7 301 38.5
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 6.4e-30 136.0 328 39.0
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 2.5e-29 134.0 292 40.1
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 2.5e-29 134.0 296 39.5
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 4.2e-29 133.3 294 38.1
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 4.2e-29 133.3 300 40.7
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 2.1e-28 131.0 315 36.8
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 2.1e-28 131.0 313 37.4
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 4.6e-28 129.8 295 39.3
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 6.0e-28 129.4 315 37.8
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 6.0e-28 129.4 313 38.0
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 1.0e-27 128.6 301 38.9
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 1.3e-27 128.3 300 39.7
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 2.3e-27 127.5 303 37.6
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 2.3e-27 127.5 297 38.7
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 2.3e-27 127.5 307 39.4
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 3.0e-27 127.1 302 37.1
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 6.7e-27 125.9 312 35.9
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 6.7e-27 125.9 295 39.7
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 1.1e-26 125.2 310 37.4
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 1.9e-26 124.4 306 38.6
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 3.3e-26 123.6 308 38.3
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 3.3e-26 123.6 299 39.1
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 1.3e-25 121.7 298 37.6
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.6e-25 121.3 318 37.4
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 2.1e-25 120.9 301 39.5
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 4.8e-25 119.8 309 39.5
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 4.8e-25 119.8 306 36.6
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 8.2e-25 119.0 300 37.7
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 8.2e-25 119.0 300 37.7
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 1.8e-24 117.9 297 40.1
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 4.0e-24 116.7 309 36.2
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 4.0e-24 116.7 308 37.0
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 6.9e-24 115.9 284 37.0
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 1.2e-23 115.2 323 38.4
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 1.5e-23 114.8 236 39.8
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 3.4e-23 113.6 307 36.2
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 3.4e-23 113.6 315 38.7
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 1.0e-22 112.1 302 36.4
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 1.0e-22 112.1 313 39.3
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 1.0e-22 112.1 295 33.9
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 1.3e-22 111.7 302 36.1
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 1.3e-22 111.7 306 32.4
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 1.7e-22 111.3 304 41.4
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 2.2e-22 110.9 299 35.5
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 3.8e-22 110.2 310 39.7
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 4.9e-22 109.8 304 34.5
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 4.9e-22 109.8 300 36.3
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 4.2e-21 106.7 299 34.1
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 4.2e-21 106.7 297 38.4
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 3.5e-20 103.6 303 37.6
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 4.6e-20 103.2 304 33.6
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 1.8e-19 101.3 306 33.3
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 3.9e-19 100.1 297 35.4
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 3.9e-19 100.1 319 36.1
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 1.1e-18 98.6 303 35.0
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 5.7e-18 96.3 301 34.6
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 2.2e-17 94.4 292 36.0
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 3.7e-17 93.6 308 35.1
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 8.2e-17 92.4 306 34.0
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 1.1e-16 92.0 302 32.5
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 1.4e-16 91.7 304 33.6
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 5.3e-16 89.7 353 33.4
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 6.9e-16 89.4 304 35.5
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.5e-15 88.2 298 36.9
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 7.7e-15 85.9 304 32.6
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 1.0e-14 85.5 244 32.8
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 1.0e-14 85.5 304 32.9
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 1.0e-14 85.5 303 33.0
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 1.3e-14 85.1 299 32.4
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 1.3e-14 85.1 303 33.0
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 2.2e-14 84.3 308 35.1
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 2.9e-14 84.0 308 34.7
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 1.4e-13 81.6 301 31.9
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 1.4e-13 81.6 307 32.2
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 1.4e-13 81.6 296 31.1
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 4.2e-13 80.1 295 33.2
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 5.5e-13 79.7 326 32.5
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 9.4e-13 79.0 303 32.0
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.6e-12 78.2 294 32.3
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 2.7e-12 77.4 247 32.4
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 3.6e-12 77.0 328 30.2
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 6.1e-12 76.3 315 29.8
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 7.9e-12 75.9 307 32.2
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 2.3e-11 74.3 299 32.8
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 8.8e-11 72.4 247 30.0
CANSAT78G1020 Cannabis sativa HOM05D006910 ORTHO05D008937 4.3e-10 70.1 315 27.6
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 9.7e-10 68.9 300 27.3
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 2.8e-09 67.4 306 29.4
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 3.7e-09 67.0 302 33.1
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 1.1e-08 65.5 300 28.7
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 3.1e-08 63.9 304 29.3
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 4.1e-08 63.5 78 57.7
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 4.1e-08 63.5 202 30.7
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 6.9e-08 62.8 34 79.4
ClCG06G001430 Citrullus lanatus HOM05D007706 ORTHO05D009593 1.5e-07 61.6 310 32.3
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 2.0e-07 61.2 34 79.4
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 2.6e-07 60.8 83 48.2
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 3.4e-07 60.5 88 42.0
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 5.9e-07 59.7 82 42.7
CAN.G524.13 Capsicum annuum HOM05D006910 ORTHO05D008937 7.7e-07 59.3 107 36.4
Cc06_g08340 Coffea canephora HOM05D001903 ORTHO05D001847 7.7e-07 59.3 91 41.8
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 1.0e-06 58.9 320 28.4
CiPaw.01G177500 Carya illinoinensis HOM05D006910 ORTHO05D008937 1.3e-06 58.5 33 78.8
QL06p021124 Quercus lobata HOM05D006910 ORTHO05D008937 1.7e-06 58.2 33 78.8
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 1.7e-06 58.2 35 68.6
Potri.010G065400 Populus trichocarpa HOM05D006910 ORTHO05D008937 2.2e-06 57.8 114 40.4
Actinidia39932 Actinidia chinensis HOM05D006910 ORTHO05D008937 3.8e-06 57.0 35 68.6
DCAR_027350 Daucus carota HOM05D006910 ORTHO05D008937 3.8e-06 57.0 115 39.1
Hma1.2p1_0112F.1_g054780 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 3.8e-06 57.0 32 78.1
Nitab4.5_0006344g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 3.8e-06 57.0 117 33.3
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 5.0e-06 56.6 107 33.6
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 6.5e-06 56.2 117 34.2
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 6.5e-06 56.2 213 29.1
Migut.G00574 Erythranthe guttata HOM05D006910 ORTHO05D008937 6.5e-06 56.2 102 34.3


User provided reference genes

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