Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 5.6e-80 300.8 147 100.0
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 4.2e-43 178.3 150 59.3
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 1.2e-42 176.8 151 58.3
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 6.1e-42 174.5 148 57.4
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 6.1e-42 174.5 148 60.1
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 5.2e-41 171.4 141 62.4
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 2.6e-40 169.1 112 72.3
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 3.3e-40 168.7 158 58.9
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 5.7e-40 167.9 139 61.9
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 7.4e-40 167.5 133 61.7
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 7.4e-40 167.5 109 71.6
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 9.7e-40 167.2 126 64.3
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.7e-39 166.4 121 66.1
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 2.2e-39 166.0 131 62.6
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 2.2e-39 166.0 112 69.6
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 2.2e-39 166.0 134 61.2
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 2.8e-39 165.6 96 79.2
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 2.8e-39 165.6 118 68.6
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.8e-39 165.6 133 60.9
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 2.8e-39 165.6 84 89.3
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 3.7e-39 165.2 133 59.4
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 3.7e-39 165.2 127 63.8
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 4.8e-39 164.9 158 57.0
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 4.8e-39 164.9 128 63.3
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 6.3e-39 164.5 160 56.9
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 8.2e-39 164.1 85 85.9
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 1.1e-38 163.7 99 77.8
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 1.8e-38 162.9 136 61.8
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 2.4e-38 162.5 153 58.8
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 2.4e-38 162.5 161 56.5
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 2.4e-38 162.5 145 60.0
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.4e-38 162.5 133 61.7
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 2.4e-38 162.5 153 54.2
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.1e-38 161.8 150 56.7
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 5.3e-38 161.4 126 61.1
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 7.0e-38 161.0 160 56.9
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 7.0e-38 161.0 95 74.7
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 9.1e-38 160.6 136 64.0
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 9.1e-38 160.6 125 67.2
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 9.1e-38 160.6 134 62.7
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 9.1e-38 160.6 134 57.5
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.2e-37 160.2 106 74.5
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.2e-37 160.2 86 82.6
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 1.6e-37 159.8 115 69.6
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.6e-37 159.8 130 61.5
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 2.0e-37 159.5 118 68.6
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 2.0e-37 159.5 142 57.7
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 2.0e-37 159.5 143 61.5
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 3.5e-37 158.7 101 74.3
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 3.5e-37 158.7 133 56.4
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 4.5e-37 158.3 95 74.7
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 4.5e-37 158.3 133 60.2
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 4.5e-37 158.3 143 58.0
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 7.7e-37 157.5 131 64.9
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 7.7e-37 157.5 101 69.3
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 1.0e-36 157.1 103 69.9
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 1.3e-36 156.8 134 60.4
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 5.0e-36 154.8 109 67.0
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 5.0e-36 154.8 97 71.1
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 8.5e-36 154.1 112 67.0
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 1.1e-35 153.7 160 54.4
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 1.9e-35 152.9 85 77.6
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 3.2e-35 152.1 114 62.3
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 3.2e-35 152.1 138 58.7
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 3.2e-35 152.1 147 53.7
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 5.5e-35 151.4 139 56.8
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.6e-34 149.8 81 77.8
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 3.6e-34 148.7 84 78.6
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 3.6e-34 148.7 81 77.8
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 6.1e-34 147.9 72 86.1
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 8.0e-34 147.5 84 81.0
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 8.0e-34 147.5 72 87.5
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 6.7e-33 144.4 97 70.1
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 8.8e-33 144.1 132 55.3
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.2e-32 143.7 81 75.3
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 2.0e-32 142.9 85 69.4
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 2.6e-32 142.5 71 84.5
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 4.4e-32 141.7 92 67.4
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 5.7e-32 141.4 132 56.1
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 1.3e-31 140.2 82 72.0
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 2.8e-31 139.0 113 65.5
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 8.2e-31 137.5 90 71.1
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.1e-30 137.1 127 60.6
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.1e-30 137.1 72 86.1
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 1.8e-30 136.3 130 56.2
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 4.5e-29 131.7 64 92.2
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.7e-28 129.8 125 52.8
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 5.0e-28 128.3 72 80.6
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 5.0e-28 128.3 143 52.4
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 8.5e-28 127.5 78 75.6
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.1e-27 127.1 60 86.7
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.5e-27 126.7 67 85.1
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 1.6e-26 123.2 124 52.4
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 2.3e-25 119.4 75 72.0
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.5e-24 116.7 72 63.9
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 2.8e-23 112.5 66 74.2
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 3.7e-23 112.1 110 54.5
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 2.5e-19 99.4 69 66.7
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 4.7e-18 95.1 63 55.6
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 5.2e-17 91.7 102 52.0
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 1.4e-06 57.0 37 64.9


User provided reference genes

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