Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 5.3e-98 360.9 169 100.0
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 3.2e-63 245.4 164 64.0
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 1.4e-61 240.0 156 67.3
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 1.8e-61 239.6 161 65.8
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 3.0e-61 238.8 158 65.8
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 5.2e-61 238.0 164 67.1
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 5.2e-61 238.0 167 66.5
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 8.8e-61 237.3 159 69.2
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 7.4e-60 234.2 145 71.0
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 7.4e-60 234.2 140 72.1
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 9.7e-60 233.8 133 72.2
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 1.7e-59 233.0 173 63.0
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 3.7e-59 231.9 153 66.7
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 8.2e-59 230.7 156 67.9
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 1.8e-58 229.6 150 66.7
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 9.1e-58 227.3 165 61.2
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 9.1e-58 227.3 150 66.7
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 2.0e-57 226.1 149 67.8
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 3.5e-57 225.3 149 67.8
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 5.9e-57 224.6 157 63.7
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 7.7e-57 224.2 139 66.9
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 7.7e-57 224.2 159 63.5
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 1.7e-56 223.0 158 64.6
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.2e-56 222.6 148 67.6
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.9e-56 222.2 160 61.2
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 6.5e-56 221.1 127 71.7
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 6.5e-56 221.1 171 57.9
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.5e-55 219.9 126 72.2
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 1.5e-55 219.9 169 59.2
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 1.5e-55 219.9 164 59.1
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 2.5e-55 219.2 134 67.2
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 3.2e-55 218.8 125 73.6
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 3.2e-55 218.8 158 62.7
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 4.2e-55 218.4 142 66.2
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 5.5e-55 218.0 151 65.6
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 5.5e-55 218.0 156 62.2
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 7.2e-55 217.6 150 64.0
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 7.2e-55 217.6 160 64.4
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.2e-54 216.9 154 63.6
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 1.6e-54 216.5 167 62.9
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 1.6e-54 216.5 164 56.7
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 2.1e-54 216.1 161 64.0
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 2.1e-54 216.1 152 63.8
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 2.7e-54 215.7 165 58.8
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 3.6e-54 215.3 167 63.5
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 6.1e-54 214.5 155 65.2
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 8.0e-54 214.2 148 63.5
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 1.4e-53 213.4 160 63.1
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 1.4e-53 213.4 161 62.7
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 1.4e-53 213.4 144 64.6
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 1.4e-53 213.4 127 70.1
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 1.8e-53 213.0 169 61.5
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.8e-53 213.0 167 61.7
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 3.0e-53 212.2 170 61.2
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 4.0e-53 211.8 167 61.7
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 4.0e-53 211.8 159 62.9
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 4.0e-53 211.8 167 61.7
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 5.2e-53 211.5 170 61.2
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 6.7e-53 211.1 158 58.9
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 6.7e-53 211.1 152 62.5
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 8.8e-53 210.7 152 60.5
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 1.2e-52 210.3 168 61.9
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.2e-52 210.3 159 62.9
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.5e-52 209.9 160 63.1
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 1.5e-52 209.9 156 62.2
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 2.6e-52 209.1 160 62.5
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 1.7e-51 206.5 124 69.4
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 2.2e-51 206.1 172 59.3
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 3.7e-51 205.3 146 64.4
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 4.8e-51 204.9 173 60.7
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 2.4e-50 202.6 139 65.5
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 3.1e-50 202.2 116 70.7
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.6e-49 199.9 152 60.5
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 3.5e-49 198.7 135 63.7
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 7.7e-49 197.6 166 56.6
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 2.9e-48 195.7 165 56.4
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 7.2e-47 191.0 135 59.3
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 6.3e-43 177.9 153 53.6
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 8.3e-43 177.6 135 55.6
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 1.2e-41 173.7 142 54.2
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 2.7e-41 172.6 137 55.5
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 4.5e-41 171.8 137 56.2
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 4.5e-41 171.8 143 56.6
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 5.0e-40 168.3 153 56.2
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 1.5e-39 166.8 115 57.4
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 7.2e-39 164.5 192 46.4
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 1.2e-38 163.7 146 47.9
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 1.6e-38 163.3 153 54.9
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 3.0e-37 159.1 164 53.0
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 5.2e-37 158.3 86 80.2
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 1.5e-36 156.8 124 53.2
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 5.7e-36 154.8 164 52.4
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 4.1e-34 148.7 172 48.8
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 2.9e-32 142.5 167 43.7
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.2e-30 137.1 98 61.2
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.8e-28 128.3 156 44.2
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 7.8e-17 91.3 60 66.7
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 5.1e-16 88.6 73 54.8
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 8.6e-16 87.8 75 53.3
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 7.3e-15 84.7 160 31.2
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 1.4e-13 80.5 56 64.3


User provided reference genes

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