Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 5.0e-135 484.6 265 100.0
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 7.7e-104 380.9 257 80.2
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 2.2e-103 379.4 257 79.4
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 2.2e-103 379.4 257 79.8
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 2.9e-103 379.0 257 79.0
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 8.5e-103 377.5 265 77.0
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.5e-102 376.7 257 78.6
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.9e-102 376.3 265 77.0
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 5.5e-102 374.8 265 76.6
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 7.2e-102 374.4 257 77.8
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 7.2e-102 374.4 260 76.9
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 9.4e-102 374.0 260 76.2
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 9.4e-102 374.0 259 77.6
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 9.4e-102 374.0 259 77.2
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.2e-101 373.6 257 78.2
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 1.6e-101 373.2 257 77.4
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.1e-101 372.9 263 76.4
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 3.6e-101 372.1 265 75.1
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 4.7e-101 371.7 253 79.1
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 6.1e-101 371.3 257 76.3
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 6.1e-101 371.3 265 75.1
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 8.0e-101 370.9 260 75.4
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 1.0e-100 370.5 260 75.8
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 1.0e-100 370.5 260 75.4
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 1.4e-100 370.2 265 74.7
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 1.8e-100 369.8 259 75.7
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 2.3e-100 369.4 257 76.3
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 2.3e-100 369.4 258 75.2
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 3.0e-100 369.0 260 75.4
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 3.0e-100 369.0 260 75.0
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 4.0e-100 368.6 256 76.6
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 5.2e-100 368.2 255 75.7
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 5.2e-100 368.2 255 76.1
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 5.2e-100 368.2 255 75.7
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 5.2e-100 368.2 265 76.2
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 5.2e-100 368.2 260 75.8
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 5.2e-100 368.2 265 72.8
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 5.2e-100 368.2 255 76.1
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 6.8e-100 367.9 255 76.1
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 6.8e-100 367.9 255 76.1
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 6.8e-100 367.9 263 75.3
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 8.8e-100 367.5 260 77.3
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 1.2e-99 367.1 252 77.0
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.5e-99 366.7 257 75.9
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.5e-99 366.7 278 72.7
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 2.0e-99 366.3 265 75.1
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 2.0e-99 366.3 257 75.1
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 2.6e-99 365.9 257 75.1
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 2.6e-99 365.9 257 77.0
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 5.7e-99 364.8 260 73.8
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 7.5e-99 364.4 257 75.9
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 9.8e-99 364.0 260 75.0
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 9.8e-99 364.0 258 74.4
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 1.3e-98 363.6 257 75.1
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.2e-98 362.8 265 72.8
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 2.2e-98 362.8 257 74.7
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.2e-98 362.8 260 74.6
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.7e-98 362.1 265 72.5
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 4.8e-98 361.7 257 75.5
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 4.8e-98 361.7 257 73.9
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 4.8e-98 361.7 265 72.1
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 6.3e-98 361.3 257 74.3
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 6.3e-98 361.3 265 72.5
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 8.3e-98 360.9 253 76.7
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 8.3e-98 360.9 251 76.1
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 2.4e-97 359.4 258 73.3
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 3.1e-97 359.0 258 73.3
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.1e-97 359.0 241 78.8
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.1e-97 359.0 259 73.0
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 4.1e-97 358.6 258 72.9
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 5.4e-97 358.2 259 73.0
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 5.4e-97 358.2 258 73.3
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 7.0e-97 357.8 265 71.3
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 9.1e-97 357.5 260 72.7
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 1.6e-96 356.7 256 73.4
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 1.6e-96 356.7 256 73.4
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 2.7e-96 355.9 253 73.1
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 3.5e-96 355.5 258 72.5
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 4.5e-96 355.1 262 71.0
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 4.5e-96 355.1 263 71.9
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 4.5e-96 355.1 263 71.9
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 4.5e-96 355.1 260 73.1
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 7.7e-96 354.4 253 74.7
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 1.3e-95 353.6 262 71.0
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 1.3e-95 353.6 261 72.4
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.7e-95 353.2 263 71.1
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 2.3e-95 352.8 263 71.1
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 2.3e-95 352.8 257 74.7
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 6.6e-95 351.3 263 71.1
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 8.6e-95 350.9 266 72.2
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.1e-94 350.5 259 72.2
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 1.1e-94 350.5 258 70.9
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.5e-94 350.1 255 72.9
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.9e-94 349.7 263 71.1
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.9e-94 349.7 263 71.9
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 7.2e-94 347.8 259 70.7
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 1.2e-93 347.1 263 70.3
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.6e-93 346.7 260 74.6
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 1.0e-92 344.0 287 70.4
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.4e-92 343.6 257 69.3
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 3.0e-92 342.4 260 71.2
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 1.7e-90 336.7 238 75.6
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.7e-90 336.7 262 67.9
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 1.1e-89 334.0 225 77.8
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.1e-89 334.0 252 71.0
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 4.1e-89 332.0 255 68.2
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 1.2e-88 330.5 225 77.3
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.5e-88 328.6 257 66.9
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 8.6e-87 324.3 281 64.8
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 1.2e-85 320.5 265 68.7
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 5.2e-84 315.1 256 63.3
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 5.2e-84 315.1 257 65.0
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.0e-81 304.7 257 63.0
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 7.5e-75 284.6 212 74.1
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 5.4e-73 278.5 212 70.8
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.7e-72 276.2 252 60.3
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-68 263.1 259 54.8
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.5e-56 222.6 176 65.3
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 8.7e-55 218.0 152 75.0
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.5e-54 217.2 257 54.5
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.5e-54 216.5 153 73.9
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.9e-50 202.2 235 44.7
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.1e-49 201.1 154 72.1
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 6.2e-45 185.3 253 43.1
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 6.0e-40 168.7 228 43.9
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.3e-39 167.5 269 46.1
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 8.4e-34 148.3 241 36.5
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.9e-30 137.1 95 69.5
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.5e-30 136.7 96 71.9
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 3.4e-27 126.3 119 58.0
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.1e-24 117.1 77 80.5
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 7.4e-22 108.6 75 76.0
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 6.3e-21 105.5 236 33.5
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 2.0e-14 84.0 101 53.5
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 2.5e-09 67.0 42 78.6


User provided reference genes

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