Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01208 Eucalyptus grandis HOM05D007513 ORTHO05D008148 5.3e-41 170.6 88 100.0
Dinv04064 Davidia involucrata HOM05D007513 ORTHO05D008148 4.5e-24 114.4 84 71.4
Dinv26918 Davidia involucrata HOM05D007513 ORTHO05D008148 2.9e-23 111.7 77 74.0
ClCG10G015420 Citrullus lanatus HOM05D007513 ORTHO05D008148 1.6e-21 105.9 73 74.0
CSS0003656 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 2.1e-21 105.5 88 61.4
CSS0045444 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 3.5e-21 104.8 88 61.4
CiPaw.02G003300 Carya illinoinensis HOM05D007513 ORTHO05D008148 3.5e-21 104.8 84 64.3
CsaV3_3G041080 Cucumis sativus L. HOM05D007513 ORTHO05D008148 4.6e-21 104.4 73 72.6
HanXRQChr08g0219141 Helianthus annuus HOM05D007513 ORTHO05D008148 6.1e-21 104.0 84 65.5
Manes.13G112700 Manihot esculenta HOM05D007513 ORTHO05D008148 6.1e-21 104.0 88 64.8
HanXRQChr08g0219071 Helianthus annuus HOM05D007513 ORTHO05D008148 7.9e-21 103.6 84 65.5
TWI73G0368 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 7.9e-21 103.6 84 66.7
Actinidia03699 Actinidia chinensis HOM05D007513 ORTHO05D008148 1.0e-20 103.2 85 65.9
Potri.009G004400 Populus trichocarpa HOM05D007513 ORTHO05D008148 2.3e-20 102.1 87 63.2
Ciclev10023109m.g Citrus clementina HOM05D007513 ORTHO05D008148 3.0e-20 101.7 85 62.4
CANSAT01G0833 Cannabis sativa HOM05D007513 ORTHO05D008148 3.9e-20 101.3 74 67.6
Cc04_g16170 Coffea canephora HOM05D007513 ORTHO05D008148 5.1e-20 100.9 77 66.2
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 5.1e-20 100.9 85 62.4
ECA233G3995 Erigeron canadensis HOM05D007513 ORTHO05D008148 6.7e-20 100.5 85 61.2
Atru.chr3.153 Acer truncatum HOM05D007513 ORTHO05D008148 8.7e-20 100.1 77 66.2
Atru.chr3.182 Acer truncatum HOM05D007513 ORTHO05D008148 1.5e-19 99.4 77 66.2
CSS0005454 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 1.5e-19 99.4 85 63.5
CSS0011696 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 1.5e-19 99.4 85 63.5
Sed0010624 Sechium edule HOM05D007513 ORTHO05D008148 2.5e-19 98.6 69 75.4
Lsat_1_v5_gn_8_19701 Lactuca sativa HOM05D007513 ORTHO05D008148 3.3e-19 98.2 84 64.3
TWI09G0373 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 3.3e-19 98.2 76 68.4
Lsat_1_v5_gn_8_17020 Lactuca sativa HOM05D007513 ORTHO05D008148 5.7e-19 97.4 80 66.2
Hma1.2p1_0730F.1_g209790 Hydrangea macrophylla HOM05D007513 ORTHO05D008148 1.6e-18 95.9 77 68.8
Rhsim11G0028000 Rhododendron simsii HOM05D007513 ORTHO05D008148 3.7e-18 94.7 78 66.7
GSVIVG01023476001 Vitis vinifera HOM05D007513 ORTHO05D008148 4.8e-18 94.4 73 65.8
vmacro14398 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 6.3e-18 94.0 79 64.6
Nitab4.5_0000714g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 1.1e-17 93.2 64 71.9
Duzib264G1124 Durio zibethinus HOM05D007513 ORTHO05D008148 1.8e-17 92.4 92 57.6
SGA_v2.0_scaffold486G52374 Striga asiatica HOM05D007513 ORTHO05D008148 2.4e-17 92.0 77 62.3
unitig_0.g544 Utricularia gibba HOM05D007513 ORTHO05D008148 2.4e-17 92.0 80 60.0
MELO3C030975.2 Cucumis melo HOM05D007513 ORTHO05D008148 3.1e-17 91.7 63 73.0
vmacro07203 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 4.1e-17 91.3 86 61.6
Sc16g0003000 Simmondsia chinensis HOM05D007513 ORTHO05D008148 9.0e-17 90.1 84 60.7
DCAR_013160 Daucus carota HOM05D007513 ORTHO05D008148 1.2e-16 89.7 63 74.6
MD15G1295400 Malus domestica HOM05D007513 ORTHO05D008148 1.2e-16 89.7 78 62.8
AUR62016920 Chenopodium quinoa HOM05D007513 ORTHO05D008148 1.5e-16 89.4 67 71.6
Thecc.01G071100 Theobroma cacao HOM05D007513 ORTHO05D008148 1.5e-16 89.4 98 53.1
Nitab4.5_0001417g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 2.0e-16 89.0 57 75.4
Aqoxy7G03437 Aquilegia oxysepala HOM05D007513 ORTHO05D008148 2.6e-16 88.6 82 57.3
SalBow6G0964 Salvia bowleyana HOM05D007513 ORTHO05D008148 2.6e-16 88.6 84 57.1
DCAR_017173 Daucus carota HOM05D007513 ORTHO05D008148 3.4e-16 88.2 65 73.8
arahy.Tifrunner.gnm1.ann1.LDCV9W Arachis hypogaea HOM05D007513 ORTHO05D008148 1.7e-15 85.9 66 65.2
Ca_18552_v3 Cicer arietinum L. HOM05D007513 ORTHO05D008148 2.2e-15 85.5 64 67.2
PGR102G1378 Punica granatum HOM05D007513 ORTHO05D008148 2.2e-15 85.5 69 63.8
Solyc03g044080.4 Solanum lycopersicum HOM05D007513 ORTHO05D008148 2.2e-15 85.5 64 64.1
TPR.G24448 Trifolium pratense HOM05D007513 ORTHO05D008148 2.2e-15 85.5 84 53.6
Ah.14g088990 Amaranthus hybridus HOM05D007513 ORTHO05D008148 3.8e-15 84.7 62 67.7
Psat6g024240 Pisum sativum HOM05D007513 ORTHO05D008148 3.8e-15 84.7 56 73.2
CDE07G2080 Ceratophyllum demersum HOM05D007513 ORTHO05D008148 5.0e-15 84.3 58 69.0
Psat6g076840 Pisum sativum HOM05D007513 ORTHO05D008148 5.0e-15 84.3 56 71.4
arahy.Tifrunner.gnm1.ann1.8F1CK2 Arachis hypogaea HOM05D007513 ORTHO05D008148 6.5e-15 84.0 64 65.6
Medtr4g088715 Medicago truncatula HOM05D007513 ORTHO05D008148 6.5e-15 84.0 67 62.7
arahy.Tifrunner.gnm1.ann1.P2RW0X Arachis hypogaea HOM05D007513 ORTHO05D008148 1.9e-14 82.4 63 66.7
arahy.Tifrunner.gnm1.ann1.QIRY5C Arachis hypogaea HOM05D007513 ORTHO05D008148 1.9e-14 82.4 63 66.7
MD02G1183800 Malus domestica HOM05D007513 ORTHO05D008148 2.5e-14 82.0 71 63.4
PGSC0003DMG400014868 Solanum tuberosum HOM05D007513 ORTHO05D008148 2.5e-14 82.0 64 64.1
Cpa.g.sc6.31 Carica papaya HOM05D007513 ORTHO05D008148 4.2e-14 81.3 66 63.6
Glyma.06G321800 Glycine max HOM05D007513 ORTHO05D008148 7.2e-14 80.5 83 53.0
Gohir.D03G027900 Gossypium hirsutum HOM05D007513 ORTHO05D008148 7.2e-14 80.5 58 65.5
Prupe.6G222400 Prunus persica HOM05D007513 ORTHO05D008148 7.2e-14 80.5 57 71.9
HPP92_010652 Vanilla planifolia HOM05D007513 ORTHO05D008148 2.1e-13 79.0 58 67.2
Os03g0205150 Oryza sativa ssp. japonica HOM05D007513 ORTHO05D008148 2.7e-13 78.6 73 58.9
Peaxi162Scf00118g02024 Petunia axillaris HOM05D007513 ORTHO05D008148 3.6e-13 78.2 79 55.7
HPP92_010626 Vanilla planifolia HOM05D007513 ORTHO05D008148 3.6e-13 78.2 69 59.4
EL10Ac8g20627 Beta vulgaris HOM05D007513 ORTHO05D008148 6.1e-13 77.4 62 62.9
Phvul.005G004100 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 3.0e-12 75.1 56 62.5
Glyma.04G112900 Glycine max HOM05D007513 ORTHO05D008148 3.9e-12 74.7 55 67.3
VMungo1080G1633 Vigna mungo HOM05D007513 ORTHO05D008148 5.1e-12 74.3 84 50.0
arahy.Tifrunner.gnm1.ann1.S3QGNL Arachis hypogaea HOM05D000640 ORTHO05D008148 1.7e-10 69.3 46 73.9
Lalb_Chr08g0235081 Lupinus albus HOM05D007513 ORTHO05D008148 1.7e-10 69.3 65 55.4
THA.LOC104807627 Tarenaya hassleriana HOM05D007513 ORTHO05D008148 1.7e-10 69.3 86 47.7
arahy.Tifrunner.gnm1.ann1.QIF42D Arachis hypogaea HOM05D007513 ORTHO05D008148 2.8e-10 68.6 72 50.0
Aa31LG6G14500 Aethionema arabicum HOM05D007513 ORTHO05D008148 4.8e-10 67.8 57 57.9
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 4.8e-10 67.8 46 71.7
FvH4_1g17450 Fragaria vesca HOM05D015974 ORTHO05D008148 4.8e-10 67.8 93 46.2
PSO170G3772 Papaver somniferum HOM05D007513 ORTHO05D008148 4.8e-10 67.8 73 52.1
Lalb_Chr24g0403261 Lupinus albus HOM05D007513 ORTHO05D008148 6.3e-10 67.4 65 53.8
Thhalv10027185m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 8.2e-10 67.0 58 55.2
FAN19G1675 Fragaria x ananassa HOM05D015974 ORTHO05D008148 8.2e-10 67.0 93 46.2
FAN23G1252 Fragaria x ananassa HOM05D015974 ORTHO05D008148 8.2e-10 67.0 93 46.2
FAN28G2668 Fragaria x ananassa HOM05D015974 ORTHO05D008148 8.2e-10 67.0 93 46.2
Sopen03g007910 Solanum pennellii HOM05D007513 ORTHO05D008148 8.2e-10 67.0 53 60.4
BcaNung02934 Brassica carinata HOM05D014277 ORTHO05D008148 1.1e-09 66.6 58 56.9
arahy.Tifrunner.gnm1.ann1.N7EVBW Arachis hypogaea HOM05D007513 ORTHO05D008148 1.8e-09 65.9 44 72.7
C07p62480 Brassica napus HOM05D014277 ORTHO05D008148 3.1e-09 65.1 58 55.2
COL.COLO4_11560 Corchorus olitorius HOM05D007513 ORTHO05D008148 6.9e-09 63.9 87 44.8
A08p22690 Brassica napus HOM05D007513 ORTHO05D008148 1.5e-08 62.8 58 51.7
Thhalv10000379m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 2.0e-08 62.4 57 54.4
Carub.0004s0224 Capsella rubella HOM05D007513 ORTHO05D008148 2.6e-08 62.0 57 54.4
RcHm_v2.0_Chr5g0053551 Rosa chinensis HOM05D015974 ORTHO05D008148 2.6e-08 62.0 94 46.8
BcaNung02064 Brassica carinata HOM05D014277 ORTHO05D008148 3.4e-08 61.6 58 51.7
arahy.Tifrunner.gnm1.ann1.X3Z0KH Arachis hypogaea HOM05D003009 ORTHO05D008148 4.5e-08 61.2 75 44.0
BcaB03g12338 Brassica carinata HOM05D007513 ORTHO05D008148 4.5e-08 61.2 48 58.3
BcaC01g00397 Brassica carinata HOM05D007513 ORTHO05D008148 4.5e-08 61.2 48 58.3
C03p79260 Brassica napus HOM05D007513 ORTHO05D008148 4.5e-08 61.2 48 58.3
BolC3t20170H Brassica oleracea HOM05D007513 ORTHO05D008148 4.5e-08 61.2 48 58.3
BraA08t34236Z Brassica rapa HOM05D007513 ORTHO05D008148 4.5e-08 61.2 48 58.3
SEGI_38697 Sequoiadendron giganteum HOM05D007513 ORTHO05D008148 7.7e-08 60.5 50 56.0
RcHm_v2.0_Chr5g0053611 Rosa chinensis HOM05D015974 ORTHO05D008148 2.2e-07 58.9 57 57.9
arahy.Tifrunner.gnm1.ann1.NLBN4J Arachis hypogaea HOM05D007513 ORTHO05D008148 5.0e-07 57.8 85 40.0
TPR.G16351 Trifolium pratense HOM05D007513 ORTHO05D008148 8.5e-07 57.0 107 36.4
BolC7t46662H Brassica oleracea HOM05D014277 ORTHO05D008148 5.5e-06 54.3 47 59.6


User provided reference genes

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