Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 2.4e-213 745.3 403 100.0
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 3.6e-137 492.3 412 63.8
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 5.2e-136 488.4 401 63.6
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 8.9e-136 487.6 402 64.7
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 2.2e-134 483.0 357 70.0
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 2.2e-134 483.0 400 63.2
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 2.2e-134 483.0 404 63.6
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 4.9e-134 481.9 356 69.4
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 6.4e-134 481.5 402 65.4
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 2.1e-132 476.5 402 64.4
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 2.3e-131 473.0 403 63.3
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 8.6e-131 471.1 368 64.9
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 1.1e-130 470.7 423 60.5
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 1.5e-130 470.3 402 62.9
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 3.3e-130 469.2 358 66.5
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 3.3e-130 469.2 401 62.3
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 5.6e-130 468.4 358 66.2
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 3.6e-129 465.7 399 61.4
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 2.6e-127 459.5 368 66.0
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 4.4e-127 458.8 368 65.2
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 1.9e-125 453.4 399 61.4
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.2e-124 450.7 356 65.2
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 3.0e-123 446.0 373 63.0
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 5.1e-123 445.3 355 64.5
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 1.9e-122 443.4 406 58.1
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 2.5e-122 443.0 406 60.1
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 3.3e-122 442.6 406 60.1
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 2.8e-121 439.5 355 62.5
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 3.6e-121 439.1 402 58.7
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.1e-120 437.6 399 59.4
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 4.0e-120 435.6 399 59.1
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 8.9e-120 434.5 401 59.1
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 9.9e-119 431.0 401 61.3
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 9.9e-119 431.0 365 62.5
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 2.2e-118 429.9 356 63.5
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 2.4e-117 426.4 356 63.2
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 1.2e-116 424.1 359 63.8
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 1.6e-116 423.7 358 63.1
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 3.5e-116 422.5 358 63.4
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 3.5e-116 422.5 357 62.5
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 3.5e-116 422.5 354 62.4
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 4.6e-116 422.2 369 60.2
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 7.8e-116 421.4 359 63.2
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 1.0e-115 421.0 400 57.2
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 1.3e-115 420.6 436 54.1
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 2.3e-115 419.9 400 57.0
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 5.1e-115 418.7 358 62.0
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 8.7e-115 417.9 366 58.7
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 1.9e-114 416.8 399 57.9
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 2.5e-114 416.4 367 57.5
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 3.3e-114 416.0 403 57.1
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 5.6e-114 415.2 403 57.3
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.3e-113 414.1 362 59.9
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 2.8e-113 412.9 358 59.5
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 6.2e-113 411.8 358 62.0
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 1.4e-112 410.6 402 57.2
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 6.9e-112 408.3 371 59.6
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 2.0e-111 406.8 416 55.3
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 2.0e-111 406.8 361 59.8
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 2.6e-111 406.4 359 60.2
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 4.5e-111 405.6 356 61.5
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 2.9e-110 402.9 387 55.8
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 1.9e-109 400.2 356 57.6
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.8e-107 393.7 310 64.8
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 1.8e-107 393.7 356 55.9
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 2.5e-106 389.8 357 55.5
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 7.4e-106 388.3 332 60.2
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 1.0e-99 367.9 360 55.3
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 2.0e-95 353.6 442 48.9
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 8.4e-94 348.2 401 51.9
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 2.8e-89 333.2 399 50.4
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 6.9e-88 328.6 359 54.3
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.7e-84 316.6 275 60.7
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.3e-83 313.5 276 61.6
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 9.7e-82 308.1 292 58.9
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 6.9e-80 302.0 323 54.8
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 2.2e-73 280.4 243 64.2
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 1.8e-72 277.3 403 45.7
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 1.9e-69 267.3 273 53.8
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 3.6e-68 263.1 348 42.0
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.6e-66 256.9 249 55.0
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 1.5e-61 241.1 322 43.2
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 1.0e-59 235.0 400 41.2
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 1.1e-53 214.9 167 63.5
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 2.0e-50 204.1 247 48.2
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 7.2e-45 185.7 163 59.5
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 4.7e-44 183.0 309 35.3
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 1.8e-40 171.0 213 51.6
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 1.2e-39 168.3 303 34.7
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 3.2e-32 143.7 299 29.8
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 2.7e-31 140.6 294 34.0
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 1.1e-27 128.6 108 62.0
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 1.7e-25 121.3 92 62.0
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 2.3e-22 110.9 71 78.9
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.8e-19 101.3 92 55.4
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 2.3e-14 84.3 65 63.1
Cre07.g355550 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 1.0e-06 58.9 320 22.8
BcaB06g26853 Brassica carinata HOM05D007498 ORTHO05D009384 6.6e-06 56.2 108 37.0


User provided reference genes

Program Settings