Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 3.9e-226 787.7 382 100.0
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 3.3e-140 502.3 378 66.4
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.2e-134 483.8 374 63.1
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 3.9e-133 478.8 375 61.9
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 4.3e-132 475.3 374 61.8
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 4.3e-132 475.3 374 62.0
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 8.2e-131 471.1 374 61.5
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.3e-130 468.4 376 60.1
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 6.9e-130 468.0 379 61.7
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.5e-129 466.8 377 59.9
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 1.5e-129 466.8 374 60.7
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 2.6e-129 466.1 376 60.4
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.9e-129 464.9 376 60.4
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 1.7e-128 463.4 376 59.3
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 5.0e-128 461.8 376 59.3
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 8.5e-128 461.1 373 61.7
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 1.9e-127 459.9 380 59.7
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 1.2e-126 457.2 374 60.4
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 2.1e-126 456.4 376 60.1
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.4e-125 453.8 376 59.8
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 7.4e-124 448.0 379 58.8
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 5.3e-122 441.8 383 59.5
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 5.3e-122 441.8 380 56.6
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 6.9e-122 441.4 378 58.2
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 2.0e-121 439.9 378 57.9
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 1.0e-120 437.6 378 57.9
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 5.0e-120 435.3 378 56.9
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 5.0e-120 435.3 381 55.4
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 1.4e-119 433.7 385 55.8
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 2.5e-119 433.0 384 56.8
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 3.2e-119 432.6 383 55.4
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 9.4e-119 431.0 387 56.1
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 2.7e-118 429.5 382 56.0
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 4.7e-118 428.7 381 57.0
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 7.9e-118 427.9 378 56.6
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 1.4e-117 427.2 382 56.0
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 1.4e-117 427.2 381 57.0
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.4e-117 427.2 381 54.9
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 2.3e-117 426.4 376 54.5
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 6.7e-117 424.9 378 55.0
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 1.1e-116 424.1 380 58.2
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 1.1e-116 424.1 380 57.1
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.5e-116 423.7 377 54.9
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 1.5e-116 423.7 384 57.0
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 4.4e-116 422.2 379 56.2
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 9.7e-116 421.0 381 55.1
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 1.7e-115 420.2 380 56.3
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 1.7e-115 420.2 380 56.3
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 2.2e-115 419.9 380 56.3
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 4.8e-115 418.7 381 55.6
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 4.8e-115 418.7 379 55.4
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 6.3e-115 418.3 382 55.8
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 1.1e-114 417.5 378 55.8
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 1.4e-114 417.2 380 55.8
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 1.4e-114 417.2 380 55.8
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 7.0e-114 414.8 380 55.8
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 7.0e-114 414.8 387 54.0
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.2e-113 414.1 378 54.5
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 1.5e-113 413.7 380 55.0
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 2.0e-113 413.3 379 54.9
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 5.9e-113 411.8 380 56.3
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 5.9e-113 411.8 381 55.9
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 7.7e-113 411.4 379 54.4
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 1.3e-112 410.6 371 52.6
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 2.9e-112 409.5 376 53.7
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 5.0e-112 408.7 378 54.5
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 1.9e-111 406.8 377 54.1
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 3.2e-111 406.0 379 53.6
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 7.2e-111 404.8 376 52.4
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 9.4e-111 404.4 347 58.2
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 2.7e-110 402.9 377 53.6
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 4.7e-110 402.1 381 53.8
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 1.4e-109 400.6 388 52.6
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 5.2e-109 398.7 376 53.7
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 4.4e-108 395.6 377 53.1
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 1.7e-107 393.7 386 53.6
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 6.3e-107 391.7 378 51.9
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 4.1e-106 389.0 323 59.1
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.6e-105 387.1 372 50.8
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 1.6e-105 387.1 402 52.5
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 3.8e-104 382.5 384 52.3
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 4.2e-103 379.0 379 50.7
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 5.5e-103 378.6 384 52.1
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 7.2e-103 378.3 380 50.5
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 1.6e-102 377.1 386 51.8
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 1.8e-101 373.6 379 49.3
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 3.7e-99 365.9 379 51.5
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 4.8e-99 365.5 387 49.4
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 2.9e-96 356.3 398 46.5
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 8.5e-96 354.8 396 47.7
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 1.9e-95 353.6 398 48.2
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 9.4e-95 351.3 394 47.5
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 1.2e-94 350.9 385 48.1
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 3.6e-94 349.4 394 47.0
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 8.0e-94 348.2 392 48.0
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 5.7e-92 342.0 377 46.9
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 1.7e-91 340.5 388 47.2
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 1.6e-89 334.0 383 46.7
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 1.6e-89 334.0 387 47.3
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 3.5e-89 332.8 397 45.3
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 7.7e-89 331.6 383 46.7
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 4.2e-87 325.9 382 46.9
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 2.1e-86 323.6 321 52.0
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 1.1e-82 311.2 380 45.5
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 9.2e-82 308.1 404 40.3
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 7.8e-81 305.1 387 40.8
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 7.8e-81 305.1 387 43.7
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 6.6e-80 302.0 375 43.2
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 8.6e-80 301.6 374 43.0
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 4.3e-79 299.3 379 42.0
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 7.3e-79 298.5 389 42.7
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 1.2e-78 297.7 241 58.9
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 1.2e-78 297.7 389 42.7
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 8.0e-78 295.0 251 60.6
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 1.0e-77 294.7 369 44.7
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.8e-77 292.0 390 39.5
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 8.9e-77 291.6 348 46.3
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 3.5e-73 279.6 386 39.1
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 8.3e-67 258.5 335 42.7
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 1.0e-64 251.5 268 50.0
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 1.3e-64 251.1 371 39.6
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 7.3e-63 245.4 375 37.3
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 2.4e-53 213.8 389 32.6
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 9.9e-44 181.8 286 38.5
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 9.6e-23 112.1 131 44.3
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 2.4e-21 107.5 146 42.5


User provided reference genes

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