Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 1.6e-236 822.4 435 100.0
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 4.3e-152 542.0 436 66.7
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 9.6e-144 514.2 439 63.8
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 5.3e-142 508.4 407 64.9
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 1.3e-140 503.8 439 62.2
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 4.9e-140 501.9 432 61.6
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 7.1e-139 498.0 415 65.3
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 1.8e-137 493.4 436 62.2
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.8e-137 493.4 434 62.2
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 2.3e-137 493.0 433 60.3
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 5.1e-137 491.9 415 63.1
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 1.1e-136 490.7 413 62.2
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 7.4e-136 488.0 426 60.8
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 7.4e-136 488.0 433 59.8
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 2.1e-135 486.5 431 61.9
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 2.1e-135 486.5 431 61.9
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 1.1e-134 484.2 408 62.3
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 2.4e-134 483.0 431 60.6
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 1.5e-133 480.3 435 60.7
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 1.0e-132 477.6 432 58.8
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 1.3e-132 477.2 410 63.2
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 2.9e-132 476.1 438 58.7
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 1.1e-131 474.2 424 59.2
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 3.2e-131 472.6 423 59.1
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 4.2e-131 472.2 431 58.9
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 4.2e-131 472.2 432 58.3
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 5.5e-131 471.9 431 58.2
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 1.6e-130 470.3 433 58.7
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 1.3e-127 460.7 416 59.6
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 1.3e-127 460.7 409 60.6
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 4.0e-126 455.7 404 58.9
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 2.6e-125 453.0 431 57.3
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 7.6e-125 451.4 404 58.4
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 1.0e-124 451.1 404 58.2
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 1.3e-124 450.7 405 57.5
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 1.7e-124 450.3 432 56.2
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 1.1e-123 447.6 433 58.0
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 1.9e-123 446.8 404 58.4
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 1.9e-123 446.8 444 56.8
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 3.2e-123 446.0 404 58.2
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 1.2e-122 444.1 404 56.2
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 1.6e-122 443.7 404 56.9
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 1.6e-122 443.7 404 58.2
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 2.1e-122 443.4 404 57.9
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 2.7e-122 443.0 434 54.8
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 4.6e-122 442.2 421 57.5
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 1.3e-121 440.7 418 55.5
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 2.3e-121 439.9 437 55.4
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 3.9e-121 439.1 411 56.2
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 1.1e-120 437.6 433 54.0
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 2.8e-119 433.0 425 56.5
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 5.3e-118 428.7 443 53.7
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 4.5e-117 425.6 426 55.6
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 4.5e-117 425.6 432 54.9
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 4.6e-114 415.6 404 56.2
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 5.1e-113 412.1 458 51.7
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 1.5e-112 410.6 429 52.9
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.5e-112 410.6 436 50.9
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 3.7e-111 406.0 400 56.5
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 1.4e-110 404.1 431 51.5
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 1.8e-110 403.7 405 52.3
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 1.2e-109 401.0 424 54.0
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 1.5e-109 400.6 402 53.7
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 2.6e-109 399.8 436 52.1
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 2.6e-109 399.8 437 51.5
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.7e-108 397.1 431 49.2
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 3.8e-108 396.0 293 66.6
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 8.5e-108 394.8 411 52.6
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 2.5e-107 393.3 433 51.3
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.5e-107 393.3 431 49.4
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 5.5e-107 392.1 411 52.6
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 1.6e-106 390.6 403 53.6
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 7.9e-106 388.3 430 50.5
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 2.3e-105 386.7 441 50.1
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 3.0e-105 386.3 411 51.6
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 8.8e-105 384.8 382 51.6
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 8.8e-105 384.8 403 52.6
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 9.7e-104 381.3 351 58.1
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 5.9e-101 372.1 411 50.6
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 1.0e-100 371.3 370 52.4
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 3.8e-100 369.4 324 63.6
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 8.0e-98 361.7 397 51.4
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 9.7e-96 354.8 448 47.3
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 1.7e-95 354.0 369 51.5
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 2.8e-95 353.2 418 46.9
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 1.1e-91 341.3 434 44.5
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 1.9e-91 340.5 321 60.7
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 3.5e-85 319.7 337 57.3
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 7.2e-83 312.0 268 64.9
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 1.7e-79 300.8 388 44.8
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 5.4e-78 295.8 429 42.0
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 1.0e-76 291.6 344 52.3
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 4.9e-71 272.7 447 37.1
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 1.3e-68 264.6 394 40.6
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 1.1e-67 261.5 410 42.4
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 1.8e-65 254.2 418 37.6
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 3.1e-65 253.4 409 36.4
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 1.2e-61 241.5 250 51.6
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 8.9e-57 225.3 209 51.2
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 1.7e-52 211.1 199 50.8
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 3.3e-43 180.3 239 48.5
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 1.1e-33 148.7 199 42.2
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 5.1e-28 129.8 80 73.8
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 8.4e-23 112.5 106 54.7
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 6.7e-20 102.8 200 35.0
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.6e-18 98.2 61 65.6
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 8.1e-18 95.9 56 69.6
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.4e-17 94.4 66 59.1
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 6.9e-09 66.2 71 53.5
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 1.3e-07 62.0 100 41.0
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.4e-06 58.5 30 80.0


User provided reference genes

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