Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 3.2e-69 265.0 139 100.0
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 5.8e-42 174.5 136 66.2
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 4.9e-41 171.4 132 66.7
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 8.3e-41 170.6 126 69.8
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.1e-40 170.2 134 65.7
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 3.2e-40 168.7 132 65.9
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 2.7e-39 165.6 135 65.2
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 7.8e-39 164.1 135 64.4
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 7.8e-39 164.1 115 71.3
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 3.0e-38 162.2 131 64.1
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.9e-38 161.8 131 65.6
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.1e-37 160.2 129 62.8
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.3e-37 158.7 131 64.9
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 7.3e-37 157.5 135 64.4
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 7.3e-37 157.5 129 65.9
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 1.2e-36 156.8 135 62.2
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.6e-36 156.4 135 60.0
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 2.8e-36 155.6 135 63.0
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 6.2e-36 154.5 135 62.2
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.1e-35 153.7 117 68.4
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.4e-35 153.3 130 62.3
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 4.0e-35 151.8 129 59.7
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 4.0e-35 151.8 129 59.7
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.0e-35 151.8 131 61.8
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 5.2e-35 151.4 134 62.7
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 6.8e-35 151.0 129 59.7
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 1.2e-34 150.2 135 60.7
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 2.6e-34 149.1 129 58.9
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 2.6e-34 149.1 124 66.9
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 3.4e-34 148.7 127 64.6
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 4.4e-34 148.3 131 58.8
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 7.5e-34 147.5 125 62.4
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 1.3e-33 146.7 129 58.9
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 1.3e-33 146.7 129 58.9
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 2.2e-33 146.0 119 60.5
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 2.9e-33 145.6 132 57.6
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 3.7e-33 145.2 130 59.2
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 6.4e-33 144.4 132 58.3
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 8.3e-33 144.1 119 63.9
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 8.3e-33 144.1 119 63.9
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 8.3e-33 144.1 135 60.0
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 1.1e-32 143.7 122 59.8
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-32 143.3 131 57.3
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.4e-32 143.3 105 68.6
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 2.4e-32 142.5 135 57.8
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.4e-32 142.5 126 61.9
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 5.4e-32 141.4 109 65.1
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 5.4e-32 141.4 112 62.5
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 7.1e-32 141.0 131 57.3
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 7.1e-32 141.0 131 57.3
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 7.1e-32 141.0 131 57.3
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 7.1e-32 141.0 131 57.3
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 7.1e-32 141.0 129 58.9
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 7.1e-32 141.0 132 58.3
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 9.2e-32 140.6 121 62.8
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.2e-31 140.2 119 63.0
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 2.1e-31 139.4 131 57.3
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 2.1e-31 139.4 131 57.3
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.1e-31 139.4 120 63.3
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 2.1e-31 139.4 121 62.8
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 3.5e-31 138.7 127 60.6
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 4.6e-31 138.3 119 63.9
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 6.0e-31 137.9 120 62.5
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.0e-31 137.9 119 63.0
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 7.8e-31 137.5 125 59.2
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.3e-30 136.7 132 57.6
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.7e-30 136.3 129 56.6
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.7e-30 136.3 125 60.0
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.7e-30 136.3 119 60.5
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.1e-30 134.8 125 59.2
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 6.6e-30 134.4 125 58.4
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 6.6e-30 134.4 125 59.2
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 8.6e-30 134.0 119 61.3
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 8.6e-30 134.0 132 55.3
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 8.6e-30 134.0 127 56.7
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 8.6e-30 134.0 125 59.2
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.1e-29 133.7 125 59.2
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-29 132.9 118 61.0
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.9e-29 132.9 132 57.6
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.9e-29 132.9 132 57.6
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.9e-29 132.9 97 67.0
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.5e-29 132.5 101 65.3
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 4.3e-29 131.7 128 57.8
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 9.5e-29 130.6 144 52.1
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 9.5e-29 130.6 109 62.4
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 3.6e-28 128.6 125 56.8
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 4.7e-28 128.3 133 54.1
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.1e-27 127.1 125 58.4
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 4.0e-27 125.2 135 55.6
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 4.0e-27 125.2 129 53.5
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.5e-26 123.2 135 52.6
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.5e-26 123.2 136 52.2
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.5e-26 123.2 123 58.5
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.6e-26 122.5 129 54.3
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.4e-26 122.1 131 56.5
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 5.8e-26 121.3 131 51.1
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 7.6e-26 120.9 130 50.0
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 9.9e-26 120.6 126 55.6
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.3e-25 120.2 131 57.3
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 4.9e-25 118.2 124 52.4
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 6.4e-25 117.9 118 54.2
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.4e-24 116.7 97 62.9
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.4e-24 116.7 102 59.8
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 2.4e-24 115.9 130 50.0
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 3.2e-24 115.5 125 48.8
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.1e-24 115.2 114 50.0
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 4.6e-23 111.7 129 44.2
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 7.8e-23 110.9 124 48.4
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.3e-22 110.2 123 48.0
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 2.3e-22 109.4 115 53.0
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 5.1e-22 108.2 73 71.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 1.1e-19 100.5 122 49.2
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.8e-19 99.8 104 52.9
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 4.0e-19 98.6 119 44.5
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.4e-18 95.5 70 68.6
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 7.6e-18 94.4 90 62.2
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.3e-17 93.6 70 70.0
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 3.2e-16 89.0 114 40.4
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 2.1e-15 86.3 83 59.0
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.0e-14 84.0 103 40.8
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 2.3e-14 82.8 78 48.7
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 4.3e-13 78.6 85 45.9
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 8.4e-09 64.3 118 31.4
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 8.4e-09 64.3 96 34.4
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 4.6e-07 58.5 42 57.1
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 4.6e-07 58.5 42 57.1
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 2.3e-06 56.2 132 25.8


User provided reference genes

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