Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.5e-89 332.8 166 100.0
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 3.3e-36 155.6 168 52.4
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.4e-34 150.2 168 51.2
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 2.0e-33 146.4 156 53.2
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 5.8e-33 144.8 167 50.3
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 1.0e-32 144.1 169 49.7
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 2.2e-32 142.9 175 49.7
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 2.9e-32 142.5 155 51.6
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 1.1e-31 140.6 176 48.9
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 3.2e-31 139.0 176 45.5
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 9.3e-31 137.5 183 45.4
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 3.5e-30 135.6 150 49.3
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 3.5e-30 135.6 176 44.3
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 4.6e-30 135.2 171 48.0
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 2.3e-29 132.9 170 45.3
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 5.1e-29 131.7 177 42.4
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 6.7e-29 131.3 185 42.7
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 6.7e-29 131.3 185 42.7
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 6.7e-29 131.3 177 42.9
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 8.7e-29 131.0 177 42.9
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 1.9e-28 129.8 166 47.0
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 3.3e-28 129.0 168 45.2
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 7.4e-28 127.9 172 45.9
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 9.6e-28 127.5 166 46.4
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.1e-26 124.0 165 50.9
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.1e-26 124.0 175 42.9
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.8e-26 123.2 177 42.9
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 9.0e-26 120.9 183 43.7
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 2.0e-25 119.8 167 46.1
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 5.0e-24 115.2 149 46.3
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 5.0e-24 115.2 142 48.6
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 5.0e-24 115.2 142 48.6
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 8.4e-24 114.4 166 45.2
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.1e-23 114.0 163 45.4
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 1.1e-23 114.0 165 44.8
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.1e-23 114.0 142 48.6
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 5.5e-23 111.7 160 46.2
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 7.1e-23 111.3 156 47.4
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 9.3e-23 110.9 163 46.0
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 9.3e-23 110.9 151 45.7
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 9.3e-23 110.9 167 43.7
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 1.6e-22 110.2 159 44.7
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 1.6e-22 110.2 165 45.5
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 1.6e-22 110.2 146 47.9
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 1.6e-22 110.2 165 45.5
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 3.5e-22 109.0 163 43.6
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 3.5e-22 109.0 163 43.6
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 6.1e-22 108.2 178 42.7
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 7.9e-22 107.8 146 45.2
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 1.0e-21 107.5 142 44.4
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 1.3e-21 107.1 168 44.0
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.8e-21 106.7 172 41.9
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 3.9e-21 105.5 161 45.3
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 5.1e-21 105.1 156 44.9
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 5.1e-21 105.1 145 49.0
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 8.7e-21 104.4 182 41.8
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 1.1e-20 104.0 162 45.1
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 2.5e-20 102.8 160 44.4
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 3.3e-20 102.4 151 43.7
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 4.3e-20 102.1 146 45.2
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 5.7e-20 101.7 146 45.2
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 5.7e-20 101.7 146 45.2
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-19 100.5 171 40.4
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 1.6e-19 100.1 136 45.6
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.2e-19 99.8 146 43.8
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 2.8e-19 99.4 159 45.9
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 2.8e-19 99.4 178 41.0
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 3.7e-19 99.0 165 43.6
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 3.7e-19 99.0 162 43.8
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 4.8e-19 98.6 149 43.6
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 1.8e-18 96.7 135 45.9
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 6.9e-18 94.7 150 44.0
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 9.0e-18 94.4 161 41.6
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 2.0e-17 93.2 179 39.1
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 4.5e-17 92.0 163 41.7
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 5.9e-17 91.7 157 40.1
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 2.2e-16 89.7 150 44.0
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 2.2e-16 89.7 150 42.7
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.9e-16 89.4 159 41.5
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 2.9e-16 89.4 157 40.8
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 3.8e-16 89.0 120 45.8
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 6.5e-16 88.2 174 37.9
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 6.5e-16 88.2 159 40.9
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 4.2e-15 85.5 201 34.8
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 5.5e-15 85.1 148 37.8
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 7.2e-15 84.7 145 42.8
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 7.2e-15 84.7 145 42.8
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 9.4e-15 84.3 142 43.0
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 9.4e-15 84.3 157 37.6
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 7.9e-14 81.3 171 35.7
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 7.9e-14 81.3 175 34.9
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 1.4e-13 80.5 146 39.0
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.9e-13 79.0 157 39.5
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 6.7e-13 78.2 138 35.5
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.5e-12 77.0 180 35.6
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 1.5e-12 77.0 194 30.4
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 4.3e-12 75.5 138 38.4
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 4.3e-12 75.5 149 41.6
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 5.7e-12 75.1 141 39.0
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 2.2e-11 73.2 129 39.5
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 6.3e-11 71.6 176 36.4
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 6.3e-11 71.6 176 36.4
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 8.2e-11 71.2 85 48.2
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 4.1e-10 68.9 151 35.1
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 5.3e-10 68.6 162 33.3
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 9.1e-10 67.8 95 44.2
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.5e-09 67.0 131 40.5
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 2.6e-09 66.2 137 38.0
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 7.7e-09 64.7 56 60.7
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 1.3e-08 63.9 178 34.8
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 3.8e-08 62.4 143 33.6
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 6.5e-08 61.6 113 39.8
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.1e-07 60.8 134 38.1
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.1e-07 60.8 82 39.0
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 3.2e-07 59.3 127 35.4
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 5.5e-07 58.5 145 33.1
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 1.6e-06 57.0 107 41.1


User provided reference genes

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