Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.3e-62 241.5 120 100.0
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.0e-35 152.5 112 69.6
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.4e-25 117.1 112 56.2
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.9e-17 92.8 96 50.0
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 3.2e-17 92.0 106 43.4
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 3.2e-17 92.0 106 43.4
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 9.4e-17 90.5 106 42.5
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 1.6e-16 89.7 106 42.5
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 2.7e-16 89.0 97 42.3
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 8.0e-16 87.4 103 40.8
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 4.0e-15 85.1 103 40.8
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 8.8e-15 84.0 109 35.8
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 4.4e-14 81.6 111 36.0
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 7.5e-14 80.9 95 38.9
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 1.7e-13 79.7 97 40.2
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 2.2e-13 79.3 102 37.3
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.8e-13 79.0 102 39.2
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 2.8e-13 79.0 95 36.8
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 3.7e-13 78.6 102 39.2
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 3.7e-13 78.6 106 34.9
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 4.8e-13 78.2 102 38.2
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.8e-13 78.2 102 38.2
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 4.8e-13 78.2 98 39.8
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 6.3e-13 77.8 107 35.5
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 8.3e-13 77.4 93 43.0
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 8.3e-13 77.4 110 34.5
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 8.3e-13 77.4 101 42.6
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 8.3e-13 77.4 104 41.3
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.1e-12 77.0 104 36.5
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 1.1e-12 77.0 114 38.6
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.1e-12 77.0 109 34.9
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 1.4e-12 76.6 117 36.8
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 1.4e-12 76.6 102 38.2
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 1.4e-12 76.6 109 32.1
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 2.4e-12 75.9 111 36.0
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 2.4e-12 75.9 95 37.9
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 3.1e-12 75.5 103 39.8
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 3.1e-12 75.5 111 31.5
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.1e-12 75.1 112 34.8
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 4.1e-12 75.1 111 35.1
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 5.4e-12 74.7 102 38.2
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 5.4e-12 74.7 110 33.6
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 5.4e-12 74.7 98 34.7
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 7.0e-12 74.3 113 34.5
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 9.1e-12 73.9 93 40.9
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 9.1e-12 73.9 97 40.2
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 1.2e-11 73.6 101 36.6
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 1.2e-11 73.6 103 36.9
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 1.6e-11 73.2 93 36.6
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.6e-11 73.2 100 34.0
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 2.0e-11 72.8 92 39.1
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.0e-11 72.8 112 36.6
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 2.7e-11 72.4 111 33.3
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 2.7e-11 72.4 107 31.8
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 2.7e-11 72.4 106 33.0
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 3.5e-11 72.0 107 31.8
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 4.5e-11 71.6 110 32.7
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 7.7e-11 70.9 88 37.5
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 7.7e-11 70.9 114 33.3
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 7.7e-11 70.9 114 33.3
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.3e-10 70.1 102 32.4
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.3e-10 70.1 109 34.9
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.3e-10 70.1 112 34.8
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 1.7e-10 69.7 109 28.4
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.7e-10 69.7 101 39.6
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 1.7e-10 69.7 112 34.8
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 1.7e-10 69.7 106 36.8
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 2.3e-10 69.3 104 30.8
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 2.9e-10 68.9 109 30.3
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 2.9e-10 68.9 89 36.0
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 2.9e-10 68.9 104 29.8
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.6e-10 67.8 109 35.8
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-09 67.0 94 38.3
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 1.1e-09 67.0 103 34.0
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.5e-09 65.9 85 38.8
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 4.2e-09 65.1 76 38.2
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 5.5e-09 64.7 107 29.0
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.2e-09 64.3 102 38.2
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.2e-08 63.5 101 33.7
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.2e-08 63.5 104 34.6
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 1.2e-08 63.5 103 32.0
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 6.1e-08 61.2 117 36.8
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.8e-07 59.7 89 33.7
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.5e-06 56.6 83 34.9
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.5e-06 56.6 114 30.7
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 3.4e-06 55.5 90 34.4
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 3.4e-06 55.5 106 30.2


User provided reference genes

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