Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00832 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.6e-24 118.6 56 100.0
Eucgr.A00838 Eucalyptus grandis HOM05D000162 ORTHO05D000090 4.6e-24 117.1 56 98.2
Eucgr.A00828 Eucalyptus grandis HOM05D000162 ORTHO05D000090 4.0e-20 104.0 56 89.3
Eucgr.A00829 Eucalyptus grandis HOM05D000162 ORTHO05D000090 4.0e-20 104.0 135 96.3
Eucgr.A00842 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.2e-19 102.4 56 89.3
Eucgr.A00844 Eucalyptus grandis HOM05D000162 ORTHO05D000090 9.9e-19 99.4 56 83.9
Eucgr.A00840 Eucalyptus grandis HOM05D000162 ORTHO05D000090 6.6e-15 86.7 52 78.8
Eucgr.A00836 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.1e-14 85.9 56 73.2
Eucgr.A00809 Eucalyptus grandis HOM05D000162 ORTHO05D000090 5.6e-14 83.6 55 72.7
Eucgr.A00743 Eucalyptus grandis HOM05D000162 ORTHO05D000090 9.5e-14 82.8 56 71.4
Eucgr.A00799 Eucalyptus grandis HOM05D000162 ORTHO05D000090 3.6e-13 80.9 56 73.2
Eucgr.A00830 Eucalyptus grandis HOM05D000162 ORTHO05D000090 6.8e-12 76.6 56 66.1
Eucgr.A00817 Eucalyptus grandis HOM05D000162 ORTHO05D000090 4.9e-10 70.5 34 94.1
Eucgr.A00824 Eucalyptus grandis HOM05D000162 ORTHO05D000090 4.9e-10 70.5 51 68.6
Glyma.05G151600 Glycine max HOM05D000162 ORTHO05D000090 8.4e-10 69.7 57 61.4
Eucgr.H04330 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.9e-09 68.6 56 57.1
QL03p013240 Quercus lobata HOM05D000162 ORTHO05D000090 3.2e-09 67.8 56 60.7
Duzib106G0930 Durio zibethinus HOM05D000162 ORTHO05D000090 4.2e-09 67.4 56 57.1
Glyma.08G108400 Glycine max HOM05D000162 ORTHO05D000090 4.2e-09 67.4 57 59.6
QL04p064892 Quercus lobata HOM05D000162 ORTHO05D000090 4.2e-09 67.4 56 57.1
Lalb_Chr13g0294781 Lupinus albus HOM05D000162 ORTHO05D000090 5.4e-09 67.0 57 59.6
QL03p017801 Quercus lobata HOM05D000162 ORTHO05D000090 5.4e-09 67.0 56 57.1
QL03p018633 Quercus lobata HOM05D000162 ORTHO05D000090 5.4e-09 67.0 56 53.6
arahy.Tifrunner.gnm1.ann1.78B0B6 Arachis hypogaea HOM05D000162 ORTHO05D000090 7.1e-09 66.6 57 59.6
Eucgr.H04332 Eucalyptus grandis HOM05D000162 ORTHO05D000090 7.1e-09 66.6 56 55.4
QL03p013302 Quercus lobata HOM05D000162 ORTHO05D000090 7.1e-09 66.6 56 55.4
Thecc.05G191000 Theobroma cacao HOM05D000162 ORTHO05D000090 1.2e-08 65.9 56 57.1
Carub.0002s0191 Capsella rubella HOM05D000162 ORTHO05D000090 2.1e-08 65.1 56 51.8
arahy.Tifrunner.gnm1.ann1.K4KTGW Arachis hypogaea HOM05D000162 ORTHO05D000090 2.7e-08 64.7 57 57.9
Ca_17997_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 2.7e-08 64.7 57 57.9
QL03p015188 Quercus lobata HOM05D000162 ORTHO05D000090 2.7e-08 64.7 56 53.6
arahy.Tifrunner.gnm1.ann1.W9XRJL Arachis hypogaea HOM05D009346 ORTHO05D003288 3.5e-08 64.3 56 51.8
QL03p009051 Quercus lobata HOM05D000162 ORTHO05D000090 3.5e-08 64.3 56 55.4
QL03p009219 Quercus lobata HOM05D000162 ORTHO05D000090 3.5e-08 64.3 56 55.4
QL03p018073 Quercus lobata HOM05D000162 ORTHO05D000090 3.5e-08 64.3 56 53.6
Thecc.05G319700 Theobroma cacao HOM05D000162 ORTHO05D000090 3.5e-08 64.3 56 53.6
Medtr8g083130 Medicago truncatula HOM05D000162 ORTHO05D000090 4.6e-08 63.9 57 56.1
QL03p013836 Quercus lobata HOM05D000162 ORTHO05D000090 4.6e-08 63.9 56 53.6
QL09p001249 Quercus lobata HOM05D000162 ORTHO05D000090 4.6e-08 63.9 56 53.6
VMungo0251G3087 Vigna mungo HOM05D000162 ORTHO05D000090 4.6e-08 63.9 57 54.4
COL.COLO4_20322 Corchorus olitorius HOM05D000162 ORTHO05D000090 6.0e-08 63.5 59 50.8
QL04p042212 Quercus lobata HOM05D000162 ORTHO05D000090 6.0e-08 63.5 56 50.0
TPR.G18222 Trifolium pratense HOM05D000162 ORTHO05D000090 6.0e-08 63.5 57 57.9
Psat7g075280 Pisum sativum HOM05D000162 ORTHO05D000090 7.8e-08 63.2 57 56.1
QL03p014424 Quercus lobata HOM05D000162 ORTHO05D000090 7.8e-08 63.2 56 50.0
Dinv06480 Davidia involucrata HOM05D000162 ORTHO05D000090 1.0e-07 62.8 57 56.1
QL03p012973 Quercus lobata HOM05D000162 ORTHO05D000090 1.0e-07 62.8 56 55.4
QL03p013262 Quercus lobata HOM05D000162 ORTHO05D000090 1.0e-07 62.8 56 55.4
TPR.G11943 Trifolium pratense HOM05D000162 ORTHO05D000090 1.0e-07 62.8 57 56.1
COL.COLO4_21653 Corchorus olitorius HOM05D000162 ORTHO05D000090 1.7e-07 62.0 57 45.6
Eucgr.H04334 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.7e-07 62.0 56 51.8
Glyma.07G173300 Glycine max HOM05D000162 ORTHO05D000090 1.7e-07 62.0 56 53.6
PGR033G0001 Punica granatum HOM05D000162 ORTHO05D000090 1.7e-07 62.0 56 50.0
PGR033G0006 Punica granatum HOM05D000162 ORTHO05D000090 1.7e-07 62.0 56 50.0
QL03p013141 Quercus lobata HOM05D000162 ORTHO05D000090 1.7e-07 62.0 56 53.6
Haze_21400 Corylus avellana HOM05D000162 ORTHO05D000090 2.3e-07 61.6 56 51.8
Phvul.002G198150 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 2.3e-07 61.6 57 54.4
Phvul.002G204300 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 2.3e-07 61.6 57 54.4
Thecc.05G190000 Theobroma cacao HOM05D000162 ORTHO05D000090 2.3e-07 61.6 56 55.4
Gorai.009G378500 Gossypium raimondii HOM05D000162 ORTHO05D000090 3.0e-07 61.2 56 50.0
PGR083G2769 Punica granatum HOM05D000162 ORTHO05D000090 3.9e-07 60.8 56 50.0
Haze_21398 Corylus avellana HOM05D000162 ORTHO05D000090 5.1e-07 60.5 56 51.8
Gohir.D05G357100 Gossypium hirsutum HOM05D000162 ORTHO05D000090 5.1e-07 60.5 56 51.8
Gorai.009G382600 Gossypium raimondii HOM05D000162 ORTHO05D000090 5.1e-07 60.5 56 50.0
Gorai.009G389500 Gossypium raimondii HOM05D000162 ORTHO05D000090 5.1e-07 60.5 56 51.8
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 5.1e-07 60.5 56 50.0
QL04p041428 Quercus lobata HOM05D000162 ORTHO05D000090 5.1e-07 60.5 56 50.0
CARHR049170 Cardamine hirsuta HOM05D000162 ORTHO05D000090 6.6e-07 60.1 56 51.8
Ca_27788_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 6.6e-07 60.1 56 50.0
Ca_30688_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 6.6e-07 60.1 56 50.0
COL.COLO4_09887 Corchorus olitorius HOM05D000162 ORTHO05D000090 6.6e-07 60.1 59 45.8
Haze_21380 Corylus avellana HOM05D000040 ORTHO05D000090 6.6e-07 60.1 56 51.8
Glyma.02G086700 Glycine max HOM05D019677 ORTHO05D000090 6.6e-07 60.1 54 53.7
Lj2g0013660 Lotus japonicus HOM05D000162 ORTHO05D000090 6.6e-07 60.1 56 48.2
QL03p013174 Quercus lobata HOM05D000162 ORTHO05D000090 6.6e-07 60.1 56 48.2
Peaxi162Scf00158g00022 Petunia axillaris HOM05D000162 ORTHO05D000090 8.7e-07 59.7 56 51.8
Peaxi162Scf00342g00122 Petunia axillaris HOM05D000162 ORTHO05D000090 8.7e-07 59.7 56 48.2
Peaxi162Scf00342g01330 Petunia axillaris HOM05D000162 ORTHO05D000090 8.7e-07 59.7 56 48.2
QL03p018645 Quercus lobata HOM05D000162 ORTHO05D000090 8.7e-07 59.7 56 53.6
QL04p042189 Quercus lobata HOM05D000162 ORTHO05D000090 8.7e-07 59.7 56 51.8
THA.LOC104814175 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 8.7e-07 59.7 56 50.0
Actinidia04473 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.1e-06 59.3 56 48.2
Gohir.D03G163000 Gossypium hirsutum HOM05D000162 ORTHO05D000090 1.1e-06 59.3 56 51.8
Gorai.003G171600 Gossypium raimondii HOM05D000162 ORTHO05D000090 1.1e-06 59.3 56 51.8
Nn1g02625 Nelumbo nucifera HOM05D000162 ORTHO05D000090 1.1e-06 59.3 56 46.4
PGR083G2280 Punica granatum HOM05D000162 ORTHO05D000090 1.1e-06 59.3 56 50.0
PGR092G0009 Punica granatum HOM05D000162 ORTHO05D000090 1.1e-06 59.3 56 50.0
QL04p040267 Quercus lobata HOM05D000162 ORTHO05D000090 1.1e-06 59.3 56 50.0
QL05p059431 Quercus lobata HOM05D000162 ORTHO05D000090 1.1e-06 59.3 56 48.2
THA.LOC109116075 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.1e-06 59.3 55 52.7
TAR362G0483 Trochodendron aralioides HOM05D000162 ORTHO05D000090 1.1e-06 59.3 55 49.1
Potri.013G150100 Populus trichocarpa HOM05D000162 ORTHO05D000090 1.5e-06 58.9 56 50.0
PGR033G0002 Punica granatum HOM05D000162 ORTHO05D000090 1.5e-06 58.9 56 48.2
PGR033G0011 Punica granatum HOM05D000162 ORTHO05D000090 1.5e-06 58.9 56 48.2
QL03p014280 Quercus lobata HOM05D000162 ORTHO05D000090 1.5e-06 58.9 56 50.0
VMungo0464G2029 Vigna mungo HOM05D000162 ORTHO05D000090 1.5e-06 58.9 56 48.2
AL2G13140 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 1.9e-06 58.5 56 51.8
Gohir.A04G034500 Gossypium hirsutum HOM05D000162 ORTHO05D000090 1.9e-06 58.5 56 50.0
Gorai.011G146600 Gossypium raimondii HOM05D000162 ORTHO05D000090 1.9e-06 58.5 56 48.2
Lsat_1_v5_gn_0_27560 Lactuca sativa HOM05D000162 ORTHO05D000090 1.9e-06 58.5 51 52.9
Lj4g0007849 Lotus japonicus HOM05D000162 ORTHO05D000090 1.9e-06 58.5 57 54.4
VMungo0464G2034 Vigna mungo HOM05D000162 ORTHO05D009617 1.9e-06 58.5 50 48.0
Carub.0002s0230 Capsella rubella HOM05D000162 ORTHO05D000090 2.5e-06 58.2 56 48.2
ECA232G1497 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.5e-06 58.2 56 44.6
Gohir.A10G129600 Gossypium hirsutum HOM05D000162 ORTHO05D000090 2.5e-06 58.2 56 48.2
Hma1.2p1_1276F.1_g272060 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 2.5e-06 58.2 56 50.0
Peaxi162Scf00154g00044 Petunia axillaris HOM05D000162 ORTHO05D000090 2.5e-06 58.2 56 44.6
Psat1g031120 Pisum sativum HOM05D000162 ORTHO05D000090 2.5e-06 58.2 56 42.9
TWI38G2180 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 2.5e-06 58.2 56 44.6
CARHR055270 Cardamine hirsuta HOM05D000162 ORTHO05D000090 3.3e-06 57.8 56 50.0
COL.COLO4_34076 Corchorus olitorius HOM05D000162 ORTHO05D000090 3.3e-06 57.8 59 44.1
Gohir.A03G008000 Gossypium hirsutum HOM05D000162 ORTHO05D000090 3.3e-06 57.8 56 50.0
Peaxi162Scf00342g01331 Petunia axillaris HOM05D000162 ORTHO05D000090 3.3e-06 57.8 56 46.4
QL03p014360 Quercus lobata HOM05D000315 ORTHO05D000090 3.3e-06 57.8 55 50.9
QL04p076201 Quercus lobata HOM05D000162 ORTHO05D000090 3.3e-06 57.8 50 54.0
RcHm_v2.0_Chr5g0078801 Rosa chinensis HOM05D000162 ORTHO05D000090 3.3e-06 57.8 56 50.0
Thecc.05G196000 Theobroma cacao HOM05D000162 ORTHO05D000090 3.3e-06 57.8 53 54.7
Thecc.05G266000 Theobroma cacao HOM05D000162 ORTHO05D000090 3.3e-06 57.8 55 47.3
Thecc.05G320000 Theobroma cacao HOM05D000162 ORTHO05D000090 3.3e-06 57.8 55 49.1
VMungo0464G1822 Vigna mungo HOM05D000162 ORTHO05D000090 3.3e-06 57.8 56 46.4
AL2G13120 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 50.0
Ca_17201_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 48.2
Gohir.D05G348800 Gossypium hirsutum HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 48.2
Gohir.D05G350900 Gossypium hirsutum HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 48.2
Gohir.D10G136600 Gossypium hirsutum HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 46.4
Gorai.004G243800 Gossypium raimondii HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 48.2
Gorai.009G384100 Gossypium raimondii HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 48.2
Gorai.011G151200 Gossypium raimondii HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 50.0
Gorai.011G151500 Gossypium raimondii HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 46.4
Peaxi162Scf00154g00321 Petunia axillaris HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 44.6
Peaxi162Scf00154g00326 Petunia axillaris HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 44.6
Prupe.6G117200 Prunus persica HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 50.0
QL03p013273 Quercus lobata HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 51.8
THA.LOC109115971 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 46.4
GSVIVG01020691001 Vitis vinifera HOM05D000162 ORTHO05D000090 4.3e-06 57.4 56 51.8
Ca_27472_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 5.6e-06 57.0 56 46.4
Duzib128G0543 Durio zibethinus HOM05D000162 ORTHO05D000090 5.6e-06 57.0 56 51.8
Thhalv10020312m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 5.6e-06 57.0 56 50.0
Glyma.16G163100 Glycine max HOM05D000162 ORTHO05D000090 5.6e-06 57.0 56 46.4
Gohir.A04G034800 Gossypium hirsutum HOM05D000162 ORTHO05D000090 5.6e-06 57.0 56 48.2
Gohir.A08G209800 Gossypium hirsutum HOM05D000162 ORTHO05D000090 5.6e-06 57.0 56 48.2
Gorai.009G376200 Gossypium raimondii HOM05D000162 ORTHO05D029832 5.6e-06 57.0 56 46.4
HanXRQChr07g0203991 Helianthus annuus HOM05D000162 ORTHO05D000090 5.6e-06 57.0 56 46.4
MD03G1113100 Malus domestica HOM05D000162 ORTHO05D000090 5.6e-06 57.0 56 51.8
QL03p013157 Quercus lobata HOM05D000162 ORTHO05D000090 5.6e-06 57.0 56 48.2
AL2G12790 Arabidopsis lyrata HOM05D000162 ORTHO05D003288 7.3e-06 56.6 56 48.2
AL2G12830 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 48.2
AL6G27650 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 50.0
AT1G62680 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 48.2
AT5G16640 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 50.0
Glyma.16G206551 Glycine max HOM05D000162 ORTHO05D000090 7.3e-06 56.6 57 49.1
Gohir.D10G132900 Gossypium hirsutum HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 48.2
Gorai.009G376700 Gossypium raimondii HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 46.4
Gorai.011G145100 Gossypium raimondii HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 48.2
Gorai.013G060600 Gossypium raimondii HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 48.2
HanXRQChr07g0203521 Helianthus annuus HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 44.6
Peaxi162Scf00342g00111 Petunia axillaris HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 48.2
Phvul.004G131300 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 46.4
Phvul.004G148700 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 46.4
Psat1g033480 Pisum sativum HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 42.9
Potri.014G117600 Populus trichocarpa HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 48.2
VMungo0464G0652 Vigna mungo HOM05D000162 ORTHO05D000090 7.3e-06 56.6 56 44.6
AL2G12810 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 46.4
Carub.0006s1485 Capsella rubella HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 50.0
CiPaw.08G120300 Carya illinoinensis HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 48.2
Duzib114G0458 Durio zibethinus HOM05D000162 ORTHO05D000090 9.6e-06 56.2 55 50.9
Gohir.A04G034300 Gossypium hirsutum HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 46.4
Gohir.D08G229600 Gossypium hirsutum HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 48.2
Gohir.D10G131500 Gossypium hirsutum HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 48.2
Hma1.2p1_1798F.1_g302890 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 44.6
Hma1.2p1_1798F.1_g302900 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 9.6e-06 56.2 55 49.1
Manes.10G077117 Manihot esculenta HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 50.0
Manes.13G005200 Manihot esculenta HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 46.4
Nn5g28361 Nelumbo nucifera HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 48.2
Peaxi162Scf00154g00039 Petunia axillaris HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 42.9
Peaxi162Scf00154g00046 Petunia axillaris HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 42.9
QL03p014045 Quercus lobata HOM05D000162 ORTHO05D000090 9.6e-06 56.2 56 46.4


User provided reference genes

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