Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.1e-72 274.2 134 100.0
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.3e-35 152.5 112 69.6
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-26 123.6 134 50.7
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 9.5e-26 120.6 115 49.6
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 6.8e-24 114.4 131 42.7
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.6e-23 112.5 128 43.8
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.6e-23 112.5 128 43.8
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 4.4e-23 111.7 117 42.7
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 7.5e-23 110.9 128 42.2
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 9.8e-23 110.5 117 42.7
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.8e-23 110.5 132 38.6
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 1.3e-22 110.2 128 43.0
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 1.7e-22 109.8 113 43.4
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.7e-22 109.8 125 41.6
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 3.7e-22 108.6 132 39.4
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 3.7e-22 108.6 113 44.2
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 4.9e-22 108.2 113 43.4
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 6.4e-22 107.8 126 38.9
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-21 107.1 132 39.4
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.4e-21 105.9 113 43.4
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 2.4e-21 105.9 117 41.9
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 4.1e-21 105.1 132 38.6
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 4.1e-21 105.1 127 38.6
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 5.4e-21 104.8 117 41.0
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 7.1e-21 104.4 131 38.9
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 1.2e-20 103.6 107 43.0
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.6e-20 103.2 106 43.4
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 1.6e-20 103.2 132 39.4
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 1.6e-20 103.2 131 38.9
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 1.6e-20 103.2 127 38.6
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 2.1e-20 102.8 108 45.4
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.1e-20 102.8 124 39.5
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.7e-20 102.4 132 37.9
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 3.5e-20 102.1 128 39.8
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 7.8e-20 100.9 112 42.9
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.0e-19 100.5 125 38.4
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.3e-19 100.1 112 40.2
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 1.7e-19 99.8 112 40.2
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.7e-19 99.8 105 42.9
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 1.7e-19 99.8 114 37.7
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.3e-19 99.4 128 35.9
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 2.3e-19 99.4 119 42.0
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 3.0e-19 99.0 116 43.1
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.0e-19 99.0 111 42.3
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.0e-19 99.0 124 40.3
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 3.9e-19 98.6 132 35.6
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 3.9e-19 98.6 112 39.3
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 3.9e-19 98.6 108 43.5
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 3.9e-19 98.6 132 35.6
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 5.1e-19 98.2 116 42.2
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 8.6e-19 97.4 126 37.3
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.1e-18 97.1 115 35.7
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.1e-18 97.1 136 36.8
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.1e-18 97.1 136 36.8
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.1e-18 97.1 100 45.0
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.1e-18 97.1 136 36.8
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.5e-18 96.7 132 34.8
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.5e-18 96.7 132 35.6
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 1.5e-18 96.7 116 40.5
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 1.9e-18 96.3 106 40.6
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.9e-18 96.3 116 40.5
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.9e-18 96.3 116 40.5
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 1.9e-18 96.3 136 36.8
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 2.5e-18 95.9 106 42.5
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 2.5e-18 95.9 121 41.3
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 3.3e-18 95.5 106 39.6
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.3e-18 95.5 121 40.5
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 3.3e-18 95.5 130 38.5
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 4.3e-18 95.1 130 36.9
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.6e-18 94.7 130 35.4
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 5.6e-18 94.7 132 36.4
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 7.3e-18 94.4 117 39.3
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 9.5e-18 94.0 134 37.3
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 1.2e-17 93.6 127 34.6
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 1.2e-17 93.6 125 38.4
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 1.2e-17 93.6 125 36.8
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.2e-17 93.6 113 38.1
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 1.6e-17 93.2 108 40.7
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 1.6e-17 93.2 105 41.9
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 1.6e-17 93.2 137 37.2
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 2.8e-17 92.4 132 33.3
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 2.8e-17 92.4 99 41.4
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 2.8e-17 92.4 125 33.6
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 3.6e-17 92.0 133 33.1
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.7e-17 91.7 105 43.8
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 4.7e-17 91.7 127 40.2
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.7e-17 91.7 122 36.9
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 4.7e-17 91.7 115 36.5
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 6.2e-17 91.3 113 38.1
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 1.2e-15 87.0 110 37.3
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.4e-15 85.1 90 46.7
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.6e-15 84.3 100 40.0
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.6e-15 84.3 102 40.2
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.9e-15 84.0 102 40.2
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.3e-14 83.6 100 39.0
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 2.2e-14 82.8 109 42.2
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 1.1e-13 80.5 90 45.6
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.4e-13 78.2 76 48.7
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.7e-12 75.9 125 30.4
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.5e-12 75.5 131 29.8
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 5.1e-11 71.6 123 36.6
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 1.9e-10 69.7 76 39.5
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 4.3e-10 68.6 142 33.8
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 4.3e-10 68.6 142 33.8
AT1G70690 Arabidopsis thaliana HOM05D000655 ORTHO05D001166 7.3e-10 67.8 125 29.6
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.2e-09 67.0 85 40.0
Haze_10903 Corylus avellana HOM05D000655 ORTHO05D001166 3.6e-09 65.5 131 27.5
Haze_10908 Corylus avellana HOM05D000655 ORTHO05D001166 3.6e-09 65.5 131 27.5
Dinv28187 Davidia involucrata HOM05D000655 ORTHO05D001166 2.4e-08 62.8 129 31.0
Solyc01g091040.3 Solanum lycopersicum HOM05D000655 ORTHO05D001166 2.4e-08 62.8 108 31.5
TWI73G0617 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 5.2e-08 61.6 130 31.5
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.8e-08 61.2 82 35.4
SEGI_14968 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 6.8e-08 61.2 133 30.1
DCAR_011631 Daucus carota HOM05D000655 ORTHO05D001166 8.9e-08 60.8 125 27.2
CDE11G0892 Ceratophyllum demersum HOM05D001542 ORTHO05D001416 5.8e-07 58.2 111 30.6
Nn1g01097 Nelumbo nucifera HOM05D000655 ORTHO05D001166 5.8e-07 58.2 128 31.2
arahy.Tifrunner.gnm1.ann1.8EB5MJ Arachis hypogaea HOM05D000655 ORTHO05D001166 7.6e-07 57.8 110 32.7
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 9.9e-07 57.4 112 31.2
MBI19_g35813_MAGBIO Magnolia biondii HOM05D000655 ORTHO05D001166 1.3e-06 57.0 126 31.0
Nn6g34052 Nelumbo nucifera HOM05D000655 ORTHO05D001166 2.2e-06 56.2 143 28.0
CSS0048814 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000306 3.8e-06 55.5 131 31.3
PGR031G1100 Punica granatum HOM05D023640 ORTHO05D007872 4.9e-06 55.1 93 37.6
Rhsim09G0038400 Rhododendron simsii HOM05D000655 ORTHO05D001166 4.9e-06 55.1 106 29.2
SGA_v2.0_scaffold49G18330 Striga asiatica HOM05D000022 ORTHO05D000306 4.9e-06 55.1 133 27.8
CANSAT25G2719 Cannabis sativa HOM05D000655 ORTHO05D001166 6.4e-06 54.7 106 25.5
CDE04G3480 Ceratophyllum demersum HOM05D000655 ORTHO05D001166 8.4e-06 54.3 106 30.2


User provided reference genes

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