Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00813 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.0e-171 605.1 314 100.0
Eucgr.H01696 Eucalyptus grandis HOM05D006446 ORTHO05D007832 8.0e-124 447.6 379 68.1
Eucgr.H02072 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.3e-118 430.3 345 70.1
Eucgr.H01701 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.9e-118 429.1 388 65.2
Eucgr.H02276 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.8e-112 409.8 297 77.1
Eucgr.H02065 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.2e-110 402.9 362 66.9
Eucgr.H01692 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.6e-106 389.4 321 70.4
Eucgr.H02080 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.3e-102 376.3 244 82.0
Eucgr.H02068 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.3e-93 345.5 382 55.5
Eucgr.H01724 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.3e-86 323.2 200 83.0
Eucgr.H02083 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.8e-83 313.5 243 72.4
Atru.chr3.290 Acer truncatum HOM05D006446 ORTHO05D007832 7.5e-82 308.1 389 47.0
Eucgr.H01733 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.7e-81 307.0 254 69.3
Eucgr.H02059 Eucalyptus grandis HOM05D006446 ORTHO05D007832 6.4e-81 305.1 254 68.9
CiPaw.01G015300 Carya illinoinensis HOM05D006446 ORTHO05D007832 3.3e-77 292.7 391 47.1
Eucgr.H01704 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.8e-76 289.7 244 68.0
Dinv26843 Davidia involucrata HOM05D006446 ORTHO05D007832 3.1e-75 286.2 389 46.0
Eucgr.H01706 Eucalyptus grandis HOM05D006446 ORTHO05D007832 8.9e-75 284.6 378 50.0
Ciclev10026145m.g Citrus clementina HOM05D006446 ORTHO05D007832 4.4e-74 282.3 390 47.4
GSVIVG01022084001 Vitis vinifera HOM05D006446 ORTHO05D007832 4.4e-74 282.3 391 47.1
Cfa004041 Carpinus fangiana HOM05D006446 ORTHO05D007832 2.9e-73 279.6 389 45.5
QL06p040688 Quercus lobata HOM05D006446 ORTHO05D007832 3.7e-73 279.3 413 44.1
Gohir.D12G070700 Gossypium hirsutum HOM05D006446 ORTHO05D007832 1.4e-72 277.3 395 46.3
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 4.1e-72 275.8 373 46.6
Gorai.008G077700 Gossypium raimondii HOM05D006446 ORTHO05D007832 4.1e-72 275.8 395 46.1
Gohir.A12G072800 Gossypium hirsutum HOM05D006446 ORTHO05D007832 6.0e-71 271.9 395 45.8
CANSAT01G1360 Cannabis sativa HOM05D006446 ORTHO05D007832 1.7e-70 270.4 396 44.4
Sabra05G0110700 Salix brachista HOM05D006446 ORTHO05D007832 8.6e-70 268.1 388 45.1
Cpa.g.sc55.118 Carica papaya HOM05D006446 ORTHO05D007832 3.3e-69 266.2 403 43.7
TAR376G0667 Trochodendron aralioides HOM05D006446 ORTHO05D007832 1.8e-67 260.4 389 44.2
TWI09G0730 Tripterygium wilfordii HOM05D006446 ORTHO05D007832 3.1e-67 259.6 389 44.0
CSS0048354 Camellia sinensis var. sinensis HOM05D006446 ORTHO05D007832 5.2e-67 258.8 323 48.9
Hma1.2p1_0017F.1_g011530 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 3.4e-66 256.1 388 44.1
Nn5g30357 Nelumbo nucifera HOM05D006446 ORTHO05D007832 2.4e-64 250.0 388 42.3
THA.LOC104827244 Tarenaya hassleriana HOM05D006446 ORTHO05D007832 5.4e-64 248.8 391 44.2
AL8G44180 Arabidopsis lyrata HOM05D006446 ORTHO05D007832 7.8e-63 245.0 391 43.2
ClCG01G016920 Citrullus lanatus HOM05D006446 ORTHO05D007832 6.6e-62 241.9 389 42.7
Manes.13G120800 Manihot esculenta HOM05D006446 ORTHO05D007832 6.6e-62 241.9 257 54.1
Actinidia36475 Actinidia chinensis HOM05D006446 ORTHO05D007832 1.1e-61 241.1 391 41.9
AT5G67170 Arabidopsis thaliana HOM05D006446 ORTHO05D007832 1.9e-61 240.4 394 42.1
Carub.0008s2734 Capsella rubella HOM05D006446 ORTHO05D007832 5.6e-61 238.8 394 41.9
Glyma.17G170400 Glycine max HOM05D006446 ORTHO05D007832 1.3e-60 237.7 391 43.5
Duzib147G1565 Durio zibethinus HOM05D006446 ORTHO05D007832 4.8e-60 235.7 379 42.7
BraA09t36599Z Brassica rapa HOM05D006446 ORTHO05D007832 2.4e-59 233.4 394 42.4
Psat4g085400 Pisum sativum HOM05D006446 ORTHO05D007832 4.0e-59 232.6 368 42.9
CARHR280460 Cardamine hirsuta HOM05D006446 ORTHO05D007832 6.9e-59 231.9 382 41.4
A09p09520 Brassica napus HOM05D006446 ORTHO05D007832 2.0e-58 230.3 393 42.2
Lalb_Chr16g0388721 Lupinus albus HOM05D006446 ORTHO05D007832 3.4e-58 229.6 386 42.5
C09p11250 Brassica napus HOM05D006446 ORTHO05D007832 4.4e-58 229.2 392 41.6
CAN.G82.26 Capsicum annuum HOM05D006446 ORTHO05D007832 4.4e-58 229.2 389 41.6
Ca_22149_v3 Cicer arietinum L. HOM05D006446 ORTHO05D007832 7.6e-58 228.4 389 42.2
Thhalv10004429m.g Eutrema salsugineum HOM05D006446 ORTHO05D007832 7.6e-58 228.4 389 41.9
ECA232G4400 Erigeron canadensis HOM05D006446 ORTHO05D007832 9.9e-58 228.0 395 40.0
Sp2g29500 Schrenkiella parvula HOM05D006446 ORTHO05D007832 9.9e-58 228.0 398 42.5
BolC9t54014H Brassica oleracea HOM05D006446 ORTHO05D007832 2.9e-57 226.5 392 41.1
Cc07_g06190 Coffea canephora HOM05D006446 ORTHO05D007832 3.8e-57 226.1 390 40.5
MELO3C007571.2 Cucumis melo HOM05D006446 ORTHO05D007832 1.1e-56 224.6 389 39.8
Sopen03g008450 Solanum pennellii HOM05D006446 ORTHO05D007832 1.1e-56 224.6 392 41.1
Eucgr.H02090 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.4e-56 224.2 224 61.6
TPR.G14592 Trifolium pratense HOM05D006446 ORTHO05D007832 4.2e-56 222.6 372 41.7
Lj4g0016139 Lotus japonicus HOM05D006446 ORTHO05D007832 9.3e-56 221.5 388 42.0
Potri.005G140500 Populus trichocarpa HOM05D006446 ORTHO05D007832 9.3e-56 221.5 311 45.7
Migut.H00414 Erythranthe guttata HOM05D006446 ORTHO05D007832 1.2e-55 221.1 392 41.6
VMungo0251G0310 Vigna mungo HOM05D006446 ORTHO05D007832 2.7e-55 219.9 394 39.8
BcaC04g23194 Brassica carinata HOM05D006446 ORTHO05D007832 4.6e-55 219.2 371 41.0
DCAR_010875 Daucus carota HOM05D006446 ORTHO05D007832 6.0e-55 218.8 340 42.6
Medtr4g094860 Medicago truncatula HOM05D006446 ORTHO05D007832 7.9e-55 218.4 371 42.0
HanXRQChr15g0490771 Helianthus annuus HOM05D006446 ORTHO05D007832 3.3e-53 213.0 362 40.6
Hund16350 Selenicereus undatus HOM05D006446 ORTHO05D007832 3.3e-53 213.0 339 44.5
Nitab4.5_0001169g0030 Nicotiana tabacum HOM05D006446 ORTHO05D007832 7.4e-53 211.8 371 41.8
Rhsim08G0099200 Rhododendron simsii HOM05D006446 ORTHO05D007832 4.8e-52 209.1 452 34.7
Solyc03g044370.3 Solanum lycopersicum HOM05D006446 ORTHO05D007832 6.2e-52 208.8 363 39.4
Lj4A152T18 Lonicera japonica HOM05D006446 ORTHO05D007832 1.4e-51 207.6 335 41.8
Thecc.01G060300 Theobroma cacao HOM05D006446 ORTHO05D007832 5.3e-51 205.7 350 40.6
Lsat_1_v5_gn_4_165160 Lactuca sativa HOM05D006446 ORTHO05D007832 1.2e-50 204.5 389 39.8
Nitab4.5_0000333g0110 Nicotiana tabacum HOM05D006446 ORTHO05D007832 1.2e-50 204.5 369 41.5
Oeu017452.1 Olea europaea HOM05D006446 ORTHO05D007832 1.2e-50 204.5 373 38.9
Phvul.003G242000 Phaseolus vulgaris HOM05D006446 ORTHO05D007832 2.6e-50 203.4 373 40.2
MSTRG.23733 Avicennia marina HOM05D006446 ORTHO05D007832 1.7e-49 200.7 337 41.2
BcaB04g20072 Brassica carinata HOM05D006446 ORTHO05D007832 4.9e-49 199.1 392 38.3
Aqoxy5G01186 Aquilegia oxysepala HOM05D006446 ORTHO05D007832 2.4e-48 196.8 397 39.0
Hma1.2p1_0017F.1_g011540 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 6.7e-46 188.7 194 54.1
SGA_v2.0_scaffold143G35805 Striga asiatica HOM05D006446 ORTHO05D007832 9.6e-45 184.9 373 39.4
ATR0762G017 Amborella trichopoda HOM05D006446 ORTHO05D007832 4.8e-44 182.6 386 36.8
Haze_15372 Corylus avellana HOM05D006446 ORTHO05D007832 4.8e-44 182.6 374 38.5
Sed0014324 Sechium edule HOM05D006446 ORTHO05D007832 1.1e-43 181.4 245 47.8
Aa31LG1G15700 Aethionema arabicum HOM05D006446 ORTHO05D007832 4.0e-43 179.5 369 36.3
Peaxi162Scf00685g00014 Petunia axillaris HOM05D006446 ORTHO05D007832 9.0e-43 178.3 387 37.7
CDE01G0083 Ceratophyllum demersum HOM05D006446 ORTHO05D007832 4.5e-42 176.0 339 38.1
vmacro17962 Vaccinium macrocarpon HOM05D006446 ORTHO05D007832 4.5e-42 176.0 270 44.1
HPP92_014795 Vanilla planifolia HOM05D006446 ORTHO05D007832 1.7e-41 174.1 399 35.6
CsaV3_6G043380 Cucumis sativus L. HOM05D006446 ORTHO05D007832 2.2e-41 173.7 245 45.7
Ah.03g145380 Amaranthus hybridus HOM05D006446 ORTHO05D007832 2.5e-40 170.2 350 36.3
AUR62003910 Chenopodium quinoa HOM05D006446 ORTHO05D007832 1.2e-39 167.9 286 41.6
EL10Ac6g15719 Beta vulgaris HOM05D006446 ORTHO05D007832 3.5e-39 166.4 317 39.4
PGSC0003DMG402034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 6.0e-39 165.6 271 40.2
PSO170G5547 Papaver somniferum HOM05D006446 ORTHO05D007832 9.6e-37 158.3 388 35.8
arahy.Tifrunner.gnm1.ann1.UR5LFG Arachis hypogaea HOM05D006446 ORTHO05D007832 2.6e-34 150.2 275 41.1
Eucgr.H01745 Eucalyptus grandis HOM05D006446 ORTHO05D007832 7.6e-34 148.7 139 64.7
arahy.Tifrunner.gnm1.ann1.W9AXS3 Arachis hypogaea HOM05D006446 ORTHO05D007832 3.8e-33 146.4 275 40.4
PSO210G7690 Papaver somniferum HOM05D006446 ORTHO05D007832 7.9e-31 138.7 303 36.0
Zm00001eb066800 Zea mays HOM05D006446 ORTHO05D007832 5.1e-30 136.0 335 34.3
unitig_27.g25331 Utricularia gibba HOM05D006446 ORTHO05D007832 4.3e-29 132.9 377 34.0
AUR62001902 Chenopodium quinoa HOM05D006446 ORTHO05D007832 4.1e-27 126.3 180 45.0
Pp3c2_9710 Physcomitrium patens HOM05D006446 ORTHO05D007832 3.2e-24 116.7 378 29.1
Eucgr.H01699 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.2e-24 116.3 80 76.2
Mapoly0012s0095 Marchantia polymorpha HOM05D006446 ORTHO05D007832 3.6e-23 113.2 390 29.5
AagrBONN_evm.TU.Sc2ySwM_368.596 Anthoceros agrestis HOM05D006446 ORTHO05D007832 1.8e-22 110.9 337 30.6
SEGI_14722 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 5.1e-22 109.4 247 34.4
Os04g0670400 Oryza sativa ssp. japonica HOM05D006446 ORTHO05D007832 1.1e-16 91.7 194 34.0
Pp3c17_8570 Physcomitrium patens HOM05D006446 ORTHO05D007832 1.9e-16 90.9 331 27.2
PGSC0003DMG401034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 3.7e-12 76.6 103 47.6
SEGI_05115 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 3.5e-10 70.1 62 56.5
Oeu014821.1 Olea europaea HOM05D006446 ORTHO05D007832 1.8e-06 57.8 71 45.1
Ca_12108_v3 Cicer arietinum L. HOM05D000775 ORTHO05D007832 2.3e-06 57.4 66 51.5
PGSC0003DMG400000946 Solanum tuberosum HOM05D006446 ORTHO05D007832 3.0e-06 57.0 44 68.2


User provided reference genes

Program Settings