Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 5.7e-172 608.2 471 100.0
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 3.6e-49 200.3 238 50.4
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 1.2e-44 185.3 236 49.6
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 1.3e-43 181.8 239 48.1
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 8.5e-43 179.1 232 45.7
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 4.2e-42 176.8 229 46.3
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 2.7e-41 174.1 240 45.0
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 3.0e-40 170.6 250 45.2
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 5.2e-40 169.9 232 44.8
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 6.7e-40 169.5 236 47.5
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 8.8e-40 169.1 248 44.0
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 4.4e-39 166.8 238 45.8
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 5.7e-39 166.4 246 45.1
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 7.5e-39 166.0 250 44.8
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 9.7e-39 165.6 237 46.0
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.3e-38 165.2 235 47.2
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.7e-38 164.9 233 44.6
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 2.2e-38 164.5 232 48.3
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 2.7e-36 157.5 237 42.2
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 7.7e-36 156.0 222 44.6
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 3.8e-35 153.7 226 44.2
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 3.8e-35 153.7 232 43.1
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 6.5e-35 152.9 244 43.4
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 4.2e-34 150.2 214 46.7
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 4.2e-34 150.2 191 47.1
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 7.2e-34 149.4 226 45.1
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 9.4e-34 149.1 244 42.2
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 1.6e-33 148.3 246 42.3
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 1.6e-33 148.3 248 41.1
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.6e-33 148.3 248 41.1
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 4.7e-33 146.7 239 42.3
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 8.0e-33 146.0 208 48.6
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 8.8e-32 142.5 240 40.8
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 5.7e-31 139.8 243 42.8
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 6.3e-30 136.3 219 42.5
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 1.1e-29 135.6 234 41.5
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 4.1e-29 133.7 214 43.0
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 9.1e-29 132.5 236 39.8
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 9.1e-29 132.5 237 40.5
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 3.5e-28 130.6 260 36.9
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 4.5e-28 130.2 268 36.9
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 7.7e-28 129.4 195 45.1
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 1.0e-27 129.0 248 39.1
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 1.7e-27 128.3 238 39.5
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 1.7e-27 128.3 255 39.2
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 3.8e-27 127.1 292 34.6
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 6.5e-27 126.3 259 39.8
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 1.1e-26 125.6 246 39.4
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 3.2e-26 124.0 189 42.3
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 4.2e-26 123.6 253 37.2
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 4.2e-26 123.6 241 38.6
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 5.5e-26 123.2 236 38.6
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 5.5e-26 123.2 198 42.9
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 9.5e-26 122.5 204 42.2
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 1.6e-25 121.7 200 41.0
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 3.6e-25 120.6 236 41.5
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 3.6e-25 120.6 236 41.5
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 8.0e-25 119.4 236 37.3
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 8.0e-25 119.4 235 38.7
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 1.4e-24 118.6 266 35.7
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 1.8e-24 118.2 235 38.7
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 1.8e-24 118.2 266 36.1
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 1.8e-24 118.2 182 40.1
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 4.0e-24 117.1 236 40.7
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 4.0e-24 117.1 186 44.6
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 5.2e-24 116.7 238 34.0
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 6.8e-24 116.3 236 37.3
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 8.8e-24 115.9 236 40.3
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 2.6e-23 114.4 250 39.6
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 2.6e-23 114.4 233 36.9
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 7.5e-23 112.8 246 36.2
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 1.3e-22 112.1 242 37.2
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 4.9e-22 110.2 231 35.5
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 4.9e-22 110.2 208 38.9
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 6.3e-22 109.8 255 34.5
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 8.3e-22 109.4 309 31.4
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 1.1e-21 109.0 191 42.9
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 1.1e-21 109.0 227 37.9
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 3.1e-21 107.5 191 42.9
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 9.2e-21 105.9 236 37.3
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.6e-20 105.1 204 39.2
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 2.0e-20 104.8 194 39.2
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 2.7e-20 104.4 284 32.7
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 7.8e-20 102.8 177 41.2
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.0e-19 102.4 248 32.7
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 1.0e-19 102.4 235 34.9
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 3.8e-19 100.5 269 33.5
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 3.8e-19 100.5 255 36.1
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 1.5e-18 98.6 188 39.9
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 5.6e-18 96.7 158 42.4
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 1.2e-17 95.5 192 36.5
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 2.1e-17 94.7 147 43.5
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 4.7e-17 93.6 260 32.3
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 5.2e-16 90.1 248 33.5
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 1.6e-12 78.6 128 44.5
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 1.6e-12 78.6 128 44.5
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 3.3e-10 70.9 239 29.7
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 4.7e-09 67.0 260 29.2
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 4.0e-08 63.9 200 33.0
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 4.0e-08 63.9 230 31.3
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 5.2e-08 63.5 61 57.4
ATR1127G221 Amborella trichopoda HOM05D006830 ORTHO05D008119 6.8e-08 63.2 327 25.1
SEGI_40666 Sequoiadendron giganteum HOM05D006830 ORTHO05D008119 8.9e-08 62.8 305 28.2
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 1.5e-07 62.0 86 46.5
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 1.5e-07 62.0 197 31.5


User provided reference genes

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