Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00699 Eucalyptus grandis HOM05D003281 ORTHO05D004128 4.4e-152 541.2 264 100.0
Eucgr.A00733 Eucalyptus grandis HOM05D003281 ORTHO05D004128 2.1e-48 196.8 289 45.0
Eucgr.A00708 Eucalyptus grandis HOM05D003281 ORTHO05D004128 3.0e-47 193.0 289 43.9
Eucgr.A00697 Eucalyptus grandis HOM05D003281 ORTHO05D004128 4.4e-43 179.1 118 78.0
Gohir.A12G048600 Gossypium hirsutum HOM05D003281 ORTHO05D004128 4.4e-43 179.1 270 43.7
Actinidia11434 Actinidia chinensis HOM05D003281 ORTHO05D004128 7.6e-43 178.3 264 43.9
Duzib132G1085 Durio zibethinus HOM05D003281 ORTHO05D004128 4.9e-42 175.6 289 41.2
Atru.chr10.431 Acer truncatum HOM05D003281 ORTHO05D004128 6.4e-42 175.3 289 40.5
Nn7g38195 Nelumbo nucifera HOM05D003281 ORTHO05D004128 3.2e-41 172.9 289 40.5
Sed0004438 Sechium edule HOM05D003281 ORTHO05D004128 4.2e-41 172.6 289 39.8
Gorai.008G050100 Gossypium raimondii HOM05D003281 ORTHO05D004128 5.4e-41 172.2 289 40.5
Dinv18011 Davidia involucrata HOM05D003281 ORTHO05D004128 9.3e-41 171.4 289 40.5
Gohir.A01G124000 Gossypium hirsutum HOM05D003281 ORTHO05D004128 9.3e-41 171.4 289 40.5
TWI34G0807 Tripterygium wilfordii HOM05D003281 ORTHO05D004128 9.3e-41 171.4 289 40.5
Ciclev10014669m.g Citrus clementina HOM05D003281 ORTHO05D004128 2.1e-40 170.2 289 40.1
MELO3C002406.2 Cucumis melo HOM05D003281 ORTHO05D004128 2.1e-40 170.2 289 39.8
Duzib248G1352 Durio zibethinus HOM05D003281 ORTHO05D004128 2.1e-40 170.2 289 40.1
Gohir.D12G047400 Gossypium hirsutum HOM05D003281 ORTHO05D004128 2.1e-40 170.2 289 40.1
Hma1.2p1_0181F.1_g079910 Hydrangea macrophylla HOM05D003281 ORTHO05D004128 2.1e-40 170.2 274 40.9
MD12G1033700 Malus domestica HOM05D003281 ORTHO05D004128 2.1e-40 170.2 289 40.5
FAN23G2047 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.7e-40 169.9 289 40.5
VMungo1080G1879 Vigna mungo HOM05D003281 ORTHO05D004128 2.7e-40 169.9 289 39.4
FAN26G3221 Fragaria x ananassa HOM05D003281 ORTHO05D004128 3.5e-40 169.5 289 39.8
ClCG03G004230 Citrullus lanatus HOM05D003281 ORTHO05D004128 4.6e-40 169.1 289 39.4
COL.COLO4_17637 Corchorus olitorius HOM05D003281 ORTHO05D004128 4.6e-40 169.1 289 40.1
CsaV3_1G010170 Cucumis sativus L. HOM05D003281 ORTHO05D004128 4.6e-40 169.1 289 39.4
RcHm_v2.0_Chr2g0124681 Rosa chinensis HOM05D003281 ORTHO05D004128 4.6e-40 169.1 289 39.8
Thecc.02G006200 Theobroma cacao HOM05D003281 ORTHO05D004128 4.6e-40 169.1 289 40.1
MD14G1035300 Malus domestica HOM05D003281 ORTHO05D004128 6.0e-40 168.7 295 39.7
Nitab4.5_0000443g0070 Nicotiana tabacum HOM05D003281 ORTHO05D004128 6.0e-40 168.7 289 39.1
Dinv01965 Davidia involucrata HOM05D003281 ORTHO05D004128 7.8e-40 168.3 289 39.4
FvH4_1g24580 Fragaria vesca HOM05D003281 ORTHO05D004128 7.8e-40 168.3 289 39.8
Gorai.002G136700 Gossypium raimondii HOM05D003281 ORTHO05D004128 7.8e-40 168.3 289 39.8
Nitab4.5_0006246g0040 Nicotiana tabacum HOM05D003281 ORTHO05D004128 1.0e-39 167.9 289 39.1
Peaxi162Scf00199g00516 Petunia axillaris HOM05D003281 ORTHO05D004128 1.3e-39 167.5 289 38.8
Glyma.04G133100 Glycine max HOM05D003281 ORTHO05D004128 1.7e-39 167.2 289 39.4
MSTRG.16470 Avicennia marina HOM05D003281 ORTHO05D004128 2.3e-39 166.8 289 39.8
FAN19G0112 Fragaria x ananassa HOM05D003281 ORTHO05D004128 3.9e-39 166.0 289 39.4
Gohir.D01G111800 Gossypium hirsutum HOM05D003281 ORTHO05D004128 3.9e-39 166.0 289 39.8
Phvul.005G018700 Phaseolus vulgaris HOM05D003281 ORTHO05D004128 5.1e-39 165.6 289 39.1
Cpa.g.sc30.140 Carica papaya HOM05D003281 ORTHO05D004128 6.6e-39 165.2 289 39.4
Sopen08g023790 Solanum pennellii HOM05D003281 ORTHO05D004128 6.6e-39 165.2 289 38.1
TAR626G1141 Trochodendron aralioides HOM05D003281 ORTHO05D004128 6.6e-39 165.2 289 39.1
CiPaw.10G062800 Carya illinoinensis HOM05D003281 ORTHO05D004128 8.7e-39 164.9 292 40.1
ECA232G1899 Erigeron canadensis HOM05D003281 ORTHO05D004128 8.7e-39 164.9 289 38.8
Solyc08g075160.3 Solanum lycopersicum HOM05D003281 ORTHO05D004128 1.1e-38 164.5 289 38.4
FvH4_7g04800 Fragaria vesca HOM05D003281 ORTHO05D004128 1.9e-38 163.7 289 39.1
Manes.08G044300 Manihot esculenta HOM05D003281 ORTHO05D004128 1.9e-38 163.7 289 38.8
Potri.010G114400 Populus trichocarpa HOM05D003281 ORTHO05D004128 1.9e-38 163.7 289 38.4
PGSC0003DMG400020817 Solanum tuberosum HOM05D003281 ORTHO05D004128 2.5e-38 163.3 289 38.1
Glyma.11G158400 Glycine max HOM05D003281 ORTHO05D004128 3.3e-38 162.9 289 38.8
Medtr5g095820 Medicago truncatula HOM05D003281 ORTHO05D004128 3.3e-38 162.9 289 39.4
Prupe.5G007600 Prunus persica HOM05D003281 ORTHO05D004128 3.3e-38 162.9 289 39.1
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 7.3e-38 161.8 290 38.6
CANSAT56G2301 Cannabis sativa HOM05D003281 ORTHO05D004128 7.3e-38 161.8 289 38.4
CANSAT56G3182 Cannabis sativa HOM05D003281 ORTHO05D004128 7.3e-38 161.8 289 38.4
CAN.G514.6 Capsicum annuum HOM05D003281 ORTHO05D004128 7.3e-38 161.8 289 38.1
Ca_18076_v3 Cicer arietinum L. HOM05D003281 ORTHO05D004128 9.6e-38 161.4 289 38.8
Lsat_1_v5_gn_4_97540 Lactuca sativa HOM05D003281 ORTHO05D004128 9.6e-38 161.4 289 38.4
TPR.G1398 Trifolium pratense HOM05D003281 ORTHO05D004128 9.6e-38 161.4 289 39.4
Psat5g186600 Pisum sativum HOM05D003281 ORTHO05D004128 1.3e-37 161.0 289 39.4
AL4G31070 Arabidopsis lyrata HOM05D003281 ORTHO05D004128 1.6e-37 160.6 290 38.6
AT2G35040 Arabidopsis thaliana HOM05D003281 ORTHO05D004128 1.6e-37 160.6 290 39.0
Carub.0004s1674 Capsella rubella HOM05D003281 ORTHO05D004128 1.6e-37 160.6 290 39.0
QL11p013631 Quercus lobata HOM05D003281 ORTHO05D004128 1.6e-37 160.6 297 38.0
GSVIVG01012120001 Vitis vinifera HOM05D003281 ORTHO05D004128 2.1e-37 160.2 289 39.1
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 2.8e-37 159.8 290 38.6
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 2.8e-37 159.8 290 38.6
Migut.B00724 Erythranthe guttata HOM05D003281 ORTHO05D004128 2.8e-37 159.8 289 38.4
RcHm_v2.0_Chr1g0326741 Rosa chinensis HOM05D003281 ORTHO05D004128 2.8e-37 159.8 289 38.4
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 3.6e-37 159.5 290 38.6
TPR.G6549 Trifolium pratense HOM05D003281 ORTHO05D004128 3.6e-37 159.5 289 39.1
Medtr3g013710 Medicago truncatula HOM05D003281 ORTHO05D004128 6.2e-37 158.7 289 39.1
PGR004G1969 Punica granatum HOM05D003281 ORTHO05D004128 8.1e-37 158.3 289 38.8
HanXRQChr13g0406911 Helianthus annuus HOM05D003281 ORTHO05D004128 1.1e-36 157.9 289 37.7
Psat5g222920 Pisum sativum HOM05D003281 ORTHO05D004128 1.1e-36 157.9 289 38.8
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 1.4e-36 157.5 290 38.3
Thhalv10016407m.g Eutrema salsugineum HOM05D003281 ORTHO05D004128 1.4e-36 157.5 290 38.3
Lalb_Chr07g0189731 Lupinus albus HOM05D003281 ORTHO05D004128 4.0e-36 156.0 289 38.1
BcaB02g09485 Brassica carinata HOM05D003281 ORTHO05D004128 5.3e-36 155.6 290 37.6
SalBow1G2706 Salvia bowleyana HOM05D003281 ORTHO05D004128 5.3e-36 155.6 289 37.7
arahy.Tifrunner.gnm1.ann1.D0LQY1 Arachis hypogaea HOM05D003281 ORTHO05D004128 6.9e-36 155.2 289 37.7
MBI14_g44727_MAGBIO Magnolia biondii HOM05D003281 ORTHO05D004128 6.9e-36 155.2 291 37.8
SGA_v2.0_scaffold6G03254 Striga asiatica HOM05D003281 ORTHO05D004128 6.9e-36 155.2 289 36.7
THA.LOC104814352 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 6.9e-36 155.2 290 37.6
Hund10057 Selenicereus undatus HOM05D003281 ORTHO05D004128 9.0e-36 154.8 289 38.1
EL10Ac1g01734 Beta vulgaris HOM05D003281 ORTHO05D004128 1.2e-35 154.5 289 37.0
vmacro14667 Vaccinium macrocarpon HOM05D003281 ORTHO05D004128 1.2e-35 154.5 289 38.8
Lj2A344T44 Lonicera japonica HOM05D003281 ORTHO05D004128 2.0e-35 153.7 290 37.2
arahy.Tifrunner.gnm1.ann1.F6IBWZ Arachis hypogaea HOM05D003281 ORTHO05D004128 2.6e-35 153.3 289 37.7
CARHR129210 Cardamine hirsuta HOM05D003281 ORTHO05D004128 2.6e-35 153.3 290 37.6
DCAR_001294 Daucus carota HOM05D003281 ORTHO05D004128 2.6e-35 153.3 290 37.9
SGA_v2.0_scaffold202G41492 Striga asiatica HOM05D003281 ORTHO05D004128 2.6e-35 153.3 289 36.0
SGA_v2.0_scaffold254G45247 Striga asiatica HOM05D003281 ORTHO05D004128 2.6e-35 153.3 289 36.3
AUR62015011 Chenopodium quinoa HOM05D003281 ORTHO05D004128 3.4e-35 152.9 289 36.3
THA.LOC104798558 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 3.4e-35 152.9 290 37.2
PSO017G0093 Papaver somniferum HOM05D003281 ORTHO05D004128 4.5e-35 152.5 289 37.7
SalBow1G7114 Salvia bowleyana HOM05D003281 ORTHO05D004128 4.5e-35 152.5 289 37.4
Sc26g0004530 Simmondsia chinensis HOM05D003281 ORTHO05D004128 4.5e-35 152.5 289 37.4
Lj3g0002589 Lotus japonicus HOM05D003281 ORTHO05D004128 9.9e-35 151.4 289 37.0
EL10Ac5g10906 Beta vulgaris HOM05D003281 ORTHO05D004128 2.9e-34 149.8 289 37.0
Cc02_g09680 Coffea canephora HOM05D003281 ORTHO05D004128 3.8e-34 149.4 289 37.0
AUR62034379 Chenopodium quinoa HOM05D003281 ORTHO05D004128 4.9e-34 149.1 289 35.6
PSO675G6428 Papaver somniferum HOM05D003281 ORTHO05D004128 6.4e-34 148.7 289 37.0
Rhsim04G0089900 Rhododendron simsii HOM05D003281 ORTHO05D004128 6.4e-34 148.7 289 37.7
Rhsim01G0054700 Rhododendron simsii HOM05D003281 ORTHO05D004128 1.4e-33 147.5 289 38.1
Cc01_g05380 Coffea canephora HOM05D003281 ORTHO05D004128 2.4e-33 146.7 289 36.3
Cc02_g28610 Coffea canephora HOM05D003281 ORTHO05D004128 3.2e-33 146.4 289 37.7
Os08g0206600 Oryza sativa ssp. japonica HOM05D003281 ORTHO05D004128 3.2e-33 146.4 290 36.2
ATR0150G008 Amborella trichopoda HOM05D003281 ORTHO05D004128 5.4e-33 145.6 289 36.0
Aqoxy5G04041 Aquilegia oxysepala HOM05D003281 ORTHO05D004128 1.2e-32 144.4 289 35.6
Cfa000681 Carpinus fangiana HOM05D003281 ORTHO05D004128 7.9e-32 141.7 285 36.8
CSS0018694 Camellia sinensis var. sinensis HOM05D003281 ORTHO05D004128 2.3e-31 140.2 259 38.2
Zm00001eb070920 Zea mays HOM05D003281 ORTHO05D004128 6.6e-31 138.7 290 34.8
CDE02G3604 Ceratophyllum demersum HOM05D003281 ORTHO05D004128 1.9e-30 137.1 294 35.4
SEGI_14905 Sequoiadendron giganteum HOM05D003281 ORTHO05D004128 2.1e-29 133.7 290 33.4
Ah.01g022040 Amaranthus hybridus HOM05D003281 ORTHO05D004128 1.1e-28 131.3 330 31.2
CDE06G0368 Ceratophyllum demersum HOM05D003281 ORTHO05D004128 1.8e-28 130.6 290 34.1
Zm00001eb413740 Zea mays HOM05D003281 ORTHO05D004128 3.4e-27 126.3 292 34.6
FAN20G2649 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.9e-26 123.2 113 60.2
Rhsim04G0092800 Rhododendron simsii HOM05D003281 ORTHO05D004128 1.2e-24 117.9 243 38.3
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 1.6e-24 117.5 113 58.4
Rhsim01G0111500 Rhododendron simsii HOM05D003281 ORTHO05D004128 2.1e-24 117.1 113 56.6
Mapoly0032s0021 Marchantia polymorpha HOM05D003281 ORTHO05D004128 1.3e-23 114.4 296 30.1
SalBow3G0238 Salvia bowleyana HOM05D003281 ORTHO05D004128 2.3e-23 113.6 113 56.6
CBR_g50928 Chara braunii HOM05D003281 ORTHO05D004128 3.0e-23 113.2 292 31.5
FAN03G3028 Fragaria x ananassa HOM05D003281 ORTHO05D004128 5.1e-23 112.5 93 63.4
AUR62022320 Chenopodium quinoa HOM05D003281 ORTHO05D004128 1.5e-22 110.9 111 55.0
FAN01G0101 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.5e-22 110.2 68 76.5
Pp3c12_24590 Physcomitrium patens HOM05D003281 ORTHO05D004128 1.6e-21 107.5 297 30.3
Rhsim04G0089200 Rhododendron simsii HOM05D003281 ORTHO05D004128 3.7e-21 106.3 270 34.4
Rhsim04G0114800 Rhododendron simsii HOM05D003281 ORTHO05D004128 1.4e-20 104.4 67 71.6
Cfa000680 Carpinus fangiana HOM05D003281 ORTHO05D004128 3.1e-20 103.2 65 75.4
FAN15G0156 Fragaria x ananassa HOM05D003281 ORTHO05D004128 4.0e-20 102.8 232 33.6
Pp3c4_1350 Physcomitrium patens HOM05D003281 ORTHO05D004128 4.5e-19 99.4 297 29.0
HPP92_009499 Vanilla planifolia HOM05D003281 ORTHO05D004128 5.8e-19 99.0 98 53.1
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 1.3e-18 97.8 98 51.0
unitig_46.g18376 Utricularia gibba HOM05D003281 ORTHO05D004128 1.3e-18 97.8 98 51.0
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 1.3e-18 97.8 98 51.0
Rhsim05G0149200 Rhododendron simsii HOM05D003281 ORTHO05D004128 2.2e-18 97.1 65 69.2
unitig_46.g18256 Utricularia gibba HOM05D003281 ORTHO05D004128 2.9e-18 96.7 98 50.0
Rhsim01G0111700 Rhododendron simsii HOM05D003281 ORTHO05D004128 6.5e-18 95.5 65 66.2
BcaC02g11585 Brassica carinata HOM05D003281 ORTHO05D004128 1.9e-17 94.0 61 68.9
FAN06G1854 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.5e-17 93.6 58 75.9
FAN06G3868 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.5e-17 93.6 58 75.9
AagrBONN_evm.TU.Sc2ySwM_368.3406 Anthoceros agrestis HOM05D003281 ORTHO05D004128 3.2e-17 93.2 113 46.0
SMO228G0099 Selaginella moellendorffii HOM05D003281 ORTHO05D004128 5.5e-17 92.4 296 26.4
unitig_48.g30290 Utricularia gibba HOM05D003281 ORTHO05D004128 7.1e-17 92.0 141 42.6
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 1.6e-16 90.9 59 69.5
unitig_46.g18375 Utricularia gibba HOM05D003281 ORTHO05D004128 3.5e-16 89.7 57 73.7
EL10Ac1g01790 Beta vulgaris HOM05D003281 ORTHO05D004128 3.0e-15 86.7 59 66.1
SHI29159 Sapria himalayana HOM05D003281 ORTHO05D000001 3.0e-15 86.7 57 68.4
EL10Ac1g02079 Beta vulgaris HOM05D003281 ORTHO05D004128 3.9e-15 86.3 57 68.4
A04p28850 Brassica napus HOM05D003281 ORTHO05D004128 5.1e-15 85.9 59 64.4
BraA09t41745Z Brassica rapa HOM05D003281 ORTHO05D004128 5.1e-15 85.9 59 64.4
unitig_46.g18364 Utricularia gibba HOM05D003281 ORTHO05D004128 2.5e-14 83.6 141 41.1
PRCOL_00001991 Prasinoderma coloniale HOM05D003281 ORTHO05D004128 3.3e-14 83.2 290 25.2
HPP92_009463 Vanilla planifolia HOM05D003281 ORTHO05D004128 1.1e-12 78.2 60 60.0
Cre12.g537581 Chlamydomonas reinhardtii HOM05D003281 ORTHO05D004128 3.1e-12 76.6 124 41.1
MCO04G009 Micromonas commoda HOM05D003281 ORTHO05D004128 4.1e-12 76.3 112 42.0
Eucgr.A00705 Eucalyptus grandis HOM05D003281 ORTHO05D004128 2.9e-10 70.1 62 64.5
BcaC04g19802 Brassica carinata HOM05D003281 ORTHO05D004128 6.5e-10 68.9 75 50.7
BcaC04g19805 Brassica carinata HOM05D003281 ORTHO05D004128 8.5e-10 68.6 59 57.6
C09p51540 Brassica napus HOM05D003281 ORTHO05D004128 8.5e-10 68.6 59 57.6
BolC9t58009H Brassica oleracea HOM05D003281 ORTHO05D004128 8.5e-10 68.6 59 57.6
BolC9t58011H Brassica oleracea HOM05D003281 ORTHO05D004128 8.5e-10 68.6 59 57.6
HPP92_009464 Vanilla planifolia HOM05D003281 ORTHO05D004128 1.4e-09 67.8 68 52.9
Eucgr.L01257 Eucalyptus grandis HOM05D003281 ORTHO05D004128 1.8e-07 60.8 79 50.6
A05p32240 Brassica napus HOM05D003281 ORTHO05D004128 2.3e-07 60.5 46 63.0
BcaB06g28812 Brassica carinata HOM05D003281 ORTHO05D004128 7.4e-06 55.5 48 54.2


User provided reference genes

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