Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 2.8e-307 1057.7 514 100.0
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.1e-247 859.8 514 78.4
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 4.9e-240 834.3 521 76.4
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.0e-237 826.6 519 75.7
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 2.3e-237 825.5 519 75.5
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.9e-237 824.7 519 75.7
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.7e-235 818.1 506 76.5
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 2.4e-234 815.5 502 76.1
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.5e-233 812.8 522 73.9
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 7.7e-233 810.4 502 75.7
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 9.4e-231 803.5 511 73.6
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.2e-230 803.1 514 72.8
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.6e-230 802.7 502 75.1
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 7.9e-230 800.4 515 73.4
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.0e-229 800.0 514 73.5
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.1e-228 796.6 511 73.6
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 9.7e-228 793.5 513 73.1
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 9.7e-228 793.5 517 73.9
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 8.2e-227 790.4 505 73.9
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 1.8e-226 789.3 516 72.7
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.3e-226 787.7 509 72.9
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 9.1e-226 786.9 508 72.0
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 9.1e-226 786.9 508 72.0
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.2e-225 786.6 508 72.0
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 3.4e-225 785.0 502 72.7
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 7.7e-225 783.9 517 71.4
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.3e-224 783.1 509 72.7
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 1.7e-224 782.7 519 71.3
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 2.9e-224 781.9 544 68.9
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 5.0e-224 781.2 503 73.4
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.1e-223 780.0 503 73.4
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.2e-222 776.5 512 72.7
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.6e-222 776.2 520 70.4
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 2.7e-222 775.4 492 73.8
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 2.6e-220 768.8 512 70.7
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 5.7e-220 767.7 513 70.8
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 7.4e-220 767.3 512 72.1
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 2.2e-219 765.8 509 70.7
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 2.8e-219 765.4 514 70.4
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 2.8e-219 765.4 513 71.9
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.1e-218 763.5 510 71.0
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.8e-218 762.7 511 70.1
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.8e-218 762.7 499 71.9
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 2.4e-218 762.3 512 70.3
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 4.1e-218 761.5 501 71.1
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 5.3e-218 761.1 517 69.6
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 5.3e-218 761.1 513 71.3
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 7.0e-218 760.8 511 70.8
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 1.2e-217 760.0 511 71.4
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 1.5e-217 759.6 501 70.9
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 2.0e-217 759.2 511 70.3
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.6e-217 758.8 514 70.8
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 3.5e-217 758.4 501 70.7
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 7.7e-217 757.3 502 70.7
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 2.2e-216 755.7 515 70.1
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 3.8e-216 755.0 503 70.6
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 3.8e-216 755.0 503 70.6
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 5.0e-216 754.6 514 70.6
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 6.5e-216 754.2 522 69.3
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 6.5e-216 754.2 513 70.6
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 5.5e-215 751.1 501 70.3
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 1.6e-214 749.6 502 70.1
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 4.7e-214 748.0 514 67.9
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 8.8e-213 743.8 509 69.4
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 4.4e-212 741.5 514 68.9
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 7.4e-212 740.7 514 70.2
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.4e-210 735.7 518 68.3
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.6e-209 733.0 522 67.6
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.6e-209 733.0 495 71.3
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.7e-209 730.7 515 68.2
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 7.7e-209 730.7 515 68.2
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 4.7e-206 721.5 509 68.8
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.0e-205 720.3 509 67.0
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.8e-205 719.5 518 66.2
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 4.0e-205 718.4 584 61.5
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 2.0e-204 716.1 512 68.2
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 2.6e-204 715.7 512 66.8
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 1.2e-201 706.8 516 66.1
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 2.2e-200 702.6 507 66.5
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 6.5e-200 701.0 517 66.5
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 4.2e-199 698.4 507 65.7
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 5.5e-199 698.0 495 67.5
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 9.4e-199 697.2 531 64.4
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 9.4e-199 697.2 527 64.7
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 2.0e-196 689.5 463 70.6
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 2.4e-194 682.6 513 64.1
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 3.1e-194 682.2 513 64.1
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.6e-190 669.8 441 71.4
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 5.0e-184 648.3 494 63.8
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.1e-183 647.1 517 60.5
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 2.1e-182 642.9 497 61.4
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.7e-179 633.3 516 63.0
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.4e-178 630.2 514 61.7
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 3.2e-178 629.0 352 81.5
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 2.0e-177 626.3 432 67.4
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.7e-176 623.2 512 59.0
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 2.5e-175 619.4 484 61.6
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 1.3e-171 607.1 517 59.2
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 2.2e-171 606.3 521 58.5
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 2.2e-171 606.3 513 60.8
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 8.6e-168 594.3 424 67.9
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.3e-160 570.5 410 69.8
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 3.7e-118 429.5 403 51.4
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 9.0e-117 424.9 257 75.5
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 5.0e-115 419.1 378 52.4
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 4.2e-114 416.0 346 54.6
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 3.9e-112 409.5 376 51.3
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 6.5e-107 392.1 387 49.1
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.0e-72 278.5 173 72.3
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 8.0e-65 252.3 161 66.5
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 5.2e-56 223.0 120 84.2
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 9.9e-39 165.6 111 69.4
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 8.7e-35 152.5 132 59.1
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 6.2e-33 146.4 310 29.0
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.4e-21 107.8 88 56.8
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 2.6e-15 87.8 57 66.7
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 2.9e-14 84.3 79 55.7
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 2.9e-14 84.3 79 55.7
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 2.9e-14 84.3 79 55.7
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 2.4e-08 64.7 120 30.0
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 4.5e-07 60.5 58 41.4


User provided reference genes

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