Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 3.2e-95 351.7 167 100.0
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 5.1e-77 291.2 165 81.2
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.6e-76 287.7 164 80.5
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.6e-76 287.7 164 79.9
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 9.6e-76 287.0 164 79.9
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 9.6e-76 287.0 167 82.0
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 1.4e-74 283.1 168 79.8
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.4e-74 282.3 166 77.7
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.1e-74 282.0 166 77.1
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 4.0e-74 281.6 169 77.5
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 5.2e-74 281.2 163 79.8
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 5.2e-74 281.2 167 80.2
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 9.0e-74 280.4 166 79.5
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.2e-73 280.0 167 79.6
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 1.5e-73 279.6 163 79.1
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 3.4e-73 278.5 165 78.8
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 5.8e-73 277.7 164 76.8
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 7.6e-73 277.3 165 77.6
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 7.6e-73 277.3 167 77.2
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.7e-72 276.2 167 77.8
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.7e-72 276.2 167 77.8
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.4e-71 273.1 162 77.8
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 4.2e-71 271.6 170 75.3
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 7.1e-71 270.8 168 76.8
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.2e-70 270.0 170 75.3
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.2e-70 270.0 166 74.7
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 1.6e-70 269.6 167 75.4
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 3.5e-70 268.5 163 76.1
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 4.6e-70 268.1 167 77.2
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 7.8e-70 267.3 165 74.5
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.0e-69 266.9 163 77.9
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.0e-69 266.9 166 74.7
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 1.0e-69 266.9 167 74.9
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 1.3e-69 266.5 164 73.8
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.0e-69 265.4 166 72.3
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 3.0e-69 265.4 166 74.1
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 3.9e-69 265.0 165 77.0
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 3.9e-69 265.0 166 74.1
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 5.1e-69 264.6 163 74.2
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.1e-68 263.5 163 77.3
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 1.5e-68 263.1 168 75.0
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 3.3e-68 261.9 162 74.7
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 5.6e-68 261.2 166 71.7
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 1.3e-67 260.0 164 73.2
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 1.3e-67 260.0 170 70.0
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 8.1e-67 257.3 168 75.0
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 1.1e-66 256.9 166 74.1
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.4e-66 256.5 165 70.3
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 1.8e-66 256.1 165 70.3
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 3.1e-66 255.4 166 70.5
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 4.0e-66 255.0 165 71.5
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 4.0e-66 255.0 160 73.1
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 5.3e-66 254.6 168 71.4
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 9.0e-66 253.8 165 71.5
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 1.2e-65 253.4 162 72.2
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 2.6e-65 252.3 161 70.8
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 2.6e-65 252.3 166 73.5
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 3.4e-65 251.9 167 71.3
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 4.5e-65 251.5 165 72.1
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 9.9e-65 250.4 163 73.6
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 9.9e-65 250.4 165 71.5
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 2.9e-64 248.8 165 69.1
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 2.9e-64 248.8 160 70.6
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 2.9e-64 248.8 167 71.3
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.9e-64 248.8 167 71.3
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 6.4e-64 247.7 162 71.0
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 6.4e-64 247.7 166 69.9
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 8.4e-64 247.3 162 69.8
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 2.4e-63 245.7 162 70.4
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 3.2e-63 245.4 166 70.5
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 4.2e-63 245.0 166 70.5
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 2.1e-62 242.7 166 69.9
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 2.1e-62 242.7 170 71.8
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 2.1e-62 242.7 166 69.9
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 2.3e-61 239.2 166 67.5
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 3.0e-61 238.8 165 67.3
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 3.9e-61 238.4 169 70.4
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 6.7e-61 237.7 169 69.8
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 1.1e-60 236.9 168 67.9
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.1e-58 230.3 167 68.3
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.0e-57 226.1 162 64.2
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.6e-57 225.7 162 64.2
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 3.4e-57 225.3 140 72.1
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 2.9e-56 222.2 140 71.4
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 2.4e-55 219.2 162 64.2
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 2.1e-54 216.1 156 66.0
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 4.6e-54 214.9 142 71.8
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.0e-53 213.8 143 69.9
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 1.3e-53 213.4 161 64.0
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 3.0e-53 212.2 141 68.8
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 3.9e-53 211.8 129 75.2
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 8.7e-53 210.7 171 63.7
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.5e-52 209.9 167 61.7
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 7.4e-52 207.6 167 56.9
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 3.7e-51 205.3 169 62.1
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 8.2e-51 204.1 167 60.5
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 1.8e-50 203.0 166 62.0
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 2.0e-49 199.5 129 76.0
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.4e-49 198.7 118 76.3
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 4.5e-49 198.4 169 60.9
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 5.8e-49 198.0 169 59.8
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 1.9e-47 193.0 171 60.2
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 8.7e-45 184.1 165 56.4
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.5e-44 183.3 165 52.1
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 5.3e-42 174.9 176 55.1
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 9.0e-42 174.1 170 55.3
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 7.6e-41 171.0 166 47.6
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 5.0e-40 168.3 161 50.3
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.1e-39 167.2 156 54.5
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 8.2e-35 151.0 143 53.8
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.4e-31 140.2 85 76.5
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.6e-30 136.7 168 47.0
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 2.1e-30 136.3 146 47.9
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 6.1e-30 134.8 90 71.1
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 1.8e-26 123.2 132 50.8
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 2.0e-25 119.8 107 58.9
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 5.2e-21 105.1 153 42.5
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.9e-16 89.4 51 74.5
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 1.7e-11 73.6 119 40.3
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 1.7e-11 73.6 42 78.6


User provided reference genes

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