Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-157 560.1 302 100.0
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.9e-155 551.2 302 98.3
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.3e-152 543.1 302 97.4
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.6e-145 519.6 296 94.9
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.9e-135 486.1 263 98.1
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.0e-116 422.9 223 99.1
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.8e-86 322.8 261 66.7
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 3.7e-86 322.4 231 73.2
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.6e-84 317.0 300 61.3
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 8.6e-83 311.2 237 67.5
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.1e-82 310.8 294 63.9
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 2.1e-81 306.6 284 62.0
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 6.8e-80 301.6 279 62.0
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 6.8e-80 301.6 270 61.1
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 8.9e-80 301.2 271 62.7
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.2e-79 300.8 287 60.3
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 9.8e-79 297.7 304 58.9
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.2e-78 296.6 300 58.0
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 2.2e-78 296.6 261 62.5
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 3.2e-77 292.7 242 64.5
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 7.0e-77 291.6 269 61.0
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 9.2e-77 291.2 228 69.3
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 1.2e-76 290.8 293 59.7
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 2.0e-76 290.0 237 66.7
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 2.7e-76 289.7 264 61.4
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.0e-75 287.7 264 59.8
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.3e-75 287.3 298 56.4
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.7e-75 287.0 227 70.0
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 3.9e-75 285.8 262 61.1
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 3.9e-75 285.8 280 56.8
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 8.6e-75 284.6 303 56.4
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 8.6e-75 284.6 286 58.7
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 1.1e-74 284.3 294 57.1
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 2.5e-74 283.1 248 60.5
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 2.5e-74 283.1 278 57.9
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 2.5e-74 283.1 284 57.7
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 2.8e-73 279.6 225 65.8
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.6e-73 279.3 238 62.2
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 3.6e-73 279.3 238 61.8
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 4.7e-73 278.9 311 54.7
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 4.7e-73 278.9 236 62.7
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 4.7e-73 278.9 270 58.1
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 6.2e-73 278.5 228 66.2
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.2e-73 278.5 228 66.2
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 8.0e-73 278.1 228 66.2
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.4e-72 277.3 228 64.5
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.8e-72 276.9 298 57.0
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.8e-72 276.9 300 57.3
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.1e-72 276.2 228 65.4
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 3.1e-72 276.2 272 60.3
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 4.0e-72 275.8 255 61.2
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 4.0e-72 275.8 270 57.4
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 5.2e-72 275.4 277 58.8
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 6.8e-72 275.0 292 56.5
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 8.9e-72 274.6 305 54.8
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 2.6e-71 273.1 303 56.4
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 4.4e-71 272.3 295 56.3
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 7.5e-71 271.6 230 63.0
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 7.5e-71 271.6 282 56.0
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 2.2e-70 270.0 266 59.0
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.9e-70 269.6 266 59.4
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 3.7e-70 269.2 261 59.8
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 4.9e-70 268.9 266 58.6
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.9e-69 266.9 228 61.8
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 4.1e-69 265.8 256 57.8
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.5e-66 257.3 231 60.2
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 3.3e-66 256.1 302 52.6
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 2.8e-65 253.1 224 60.3
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 4.7e-65 252.3 245 54.7
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 4.7e-65 252.3 221 63.8
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.8e-64 250.4 230 63.5
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 2.3e-64 250.0 286 51.0
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 4.0e-64 249.2 298 52.7
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 6.8e-64 248.4 264 53.8
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 6.8e-64 248.4 239 56.1
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.2e-63 247.7 187 67.4
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 5.8e-63 245.4 306 52.6
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 5.8e-63 245.4 201 63.7
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.3e-62 244.2 268 52.2
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 2.2e-62 243.4 234 59.0
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.9e-62 243.0 268 51.9
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 4.9e-62 242.3 235 57.9
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.9e-61 240.4 308 51.3
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 4.1e-61 239.2 226 58.0
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 5.4e-61 238.8 210 60.5
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 5.4e-61 238.8 270 52.2
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 7.1e-61 238.4 229 59.8
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 1.6e-60 237.3 204 60.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 2.7e-60 236.5 167 71.9
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 7.8e-60 235.0 210 59.0
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 7.8e-60 235.0 210 59.0
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 8.6e-59 231.5 210 58.1
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.8e-57 226.5 232 56.9
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 3.6e-57 226.1 322 46.6
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 5.2e-56 222.2 265 51.7
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 2.2e-54 216.9 147 76.9
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.9e-50 203.8 178 61.8
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.6e-49 200.7 302 41.4
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.8e-49 199.9 166 66.3
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 6.8e-48 195.3 188 59.0
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.6e-47 193.4 155 67.7
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.2e-46 190.3 202 54.5
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.2e-44 184.5 184 56.5
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.1e-44 183.7 111 96.4
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 2.7e-44 183.3 167 61.7
Eucgr.A01942 Eucalyptus grandis HOM05D005898 ORTHO05D007493 2.8e-41 173.3 107 92.5
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.3e-38 164.5 168 49.4
Eucgr.J01273 Eucalyptus grandis HOM05D005898 ORTHO05D007493 5.4e-37 159.1 107 87.9
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.5e-34 150.2 191 48.7
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.1e-32 144.8 178 51.7
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 9.9e-31 138.3 122 61.5
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 8.4e-30 135.2 99 67.7
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.4e-29 134.4 121 60.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.4e-29 133.7 169 53.8
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 6.2e-25 119.0 158 52.5
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 6.5e-22 109.0 170 34.1
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 5.5e-21 105.9 165 35.8
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 1.8e-19 100.9 61 80.3
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.1e-13 81.6 74 60.8
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 3.5e-12 76.6 56 66.1
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 6.1e-12 75.9 159 35.8
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 4.8e-09 66.2 166 31.3
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.5e-06 55.8 117 43.6
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 8.5e-06 55.5 97 41.2


User provided reference genes

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