Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00531 Eucalyptus grandis HOM05D003987 ORTHO05D004532 4.3e-133 478.0 244 100.0
Atru.chr8.2120 Acer truncatum HOM05D003987 ORTHO05D004532 2.8e-44 183.0 229 49.3
Duzib093G0208 Durio zibethinus HOM05D003987 ORTHO05D004532 5.4e-43 178.7 204 50.0
QL07p027561 Quercus lobata HOM05D003987 ORTHO05D004532 1.6e-42 177.2 228 48.2
Thecc.05G024900 Theobroma cacao HOM05D003987 ORTHO05D004532 2.0e-42 176.8 215 47.9
Sabra06G0072400 Salix brachista HOM05D003987 ORTHO05D004532 3.5e-42 176.0 192 51.0
Duzib093G1974 Durio zibethinus HOM05D003987 ORTHO05D004532 5.9e-42 175.3 204 49.5
Potri.006G094600 Populus trichocarpa HOM05D003987 ORTHO05D004532 1.3e-41 174.1 222 46.4
Ciclev10011513m.g Citrus clementina HOM05D003987 ORTHO05D004532 1.1e-40 171.0 238 45.8
Dinv35526 Davidia involucrata HOM05D003987 ORTHO05D004532 2.5e-40 169.9 216 48.6
Dinv37095 Davidia involucrata HOM05D003987 ORTHO05D004532 4.2e-40 169.1 207 51.7
Lj2A83T77 Lonicera japonica HOM05D003987 ORTHO05D004532 1.2e-39 167.5 209 48.3
Potri.016G109100 Populus trichocarpa HOM05D003987 ORTHO05D004532 4.7e-39 165.6 192 49.5
Gohir.A01G224300 Gossypium hirsutum HOM05D003987 ORTHO05D004532 6.1e-39 165.2 178 50.6
Gorai.002G259700 Gossypium raimondii HOM05D003987 ORTHO05D004532 6.1e-39 165.2 178 51.1
Gohir.D01G213600 Gossypium hirsutum HOM05D003987 ORTHO05D004532 8.0e-39 164.9 178 51.1
Haze_20924 Corylus avellana HOM05D003987 ORTHO05D004532 2.3e-38 163.3 203 51.7
GSVIVG01034033001 Vitis vinifera HOM05D003987 ORTHO05D004532 2.3e-38 163.3 232 44.4
Gohir.D04G127200 Gossypium hirsutum HOM05D003987 ORTHO05D004532 3.0e-38 162.9 243 42.8
Gohir.A04G086900 Gossypium hirsutum HOM05D003987 ORTHO05D004532 6.8e-38 161.8 177 50.8
Gorai.012G110200 Gossypium raimondii HOM05D003987 ORTHO05D004532 6.8e-38 161.8 247 42.1
Cfa017278 Carpinus fangiana HOM05D003987 ORTHO05D004532 8.9e-38 161.4 202 51.5
Cpa.g.sc56.87 Carica papaya HOM05D003987 ORTHO05D004532 2.0e-37 160.2 184 49.5
ClCG10G021770 Citrullus lanatus HOM05D003987 ORTHO05D004532 3.4e-37 159.5 212 45.3
Duzib128G2001 Durio zibethinus HOM05D003987 ORTHO05D004532 7.5e-37 158.3 249 41.4
MELO3C009204.2 Cucumis melo HOM05D003987 ORTHO05D004532 6.3e-36 155.2 213 44.6
Sed0006107 Sechium edule HOM05D003987 ORTHO05D004532 1.8e-35 153.7 212 45.8
CsaV3_3G034330 Cucumis sativus L. HOM05D003987 ORTHO05D004532 2.4e-35 153.3 213 44.1
Prupe.6G268000 Prunus persica HOM05D003987 ORTHO05D004532 4.1e-35 152.5 213 47.9
TWI77G0200 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 5.9e-34 148.7 242 41.3
CSS0027188 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 2.3e-33 146.7 212 43.9
COL.COLO4_14650 Corchorus olitorius HOM05D003987 ORTHO05D004532 3.8e-33 146.0 207 44.9
Carub.0004s1992 Capsella rubella HOM05D003987 ORTHO05D004532 8.6e-33 144.8 216 44.9
Peaxi162Scf01302g00045 Petunia axillaris HOM05D003987 ORTHO05D004532 7.3e-32 141.7 225 42.2
Thhalv10016588m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 1.2e-31 141.0 216 42.1
Nitab4.5_0017865g0010 Nicotiana tabacum HOM05D003987 ORTHO05D004532 1.2e-31 141.0 239 41.4
AL4G34930 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 1.6e-31 140.6 205 44.9
AT2G37960 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 1.6e-31 140.6 205 44.9
Nitab4.5_0000119g0280 Nicotiana tabacum HOM05D003987 ORTHO05D004532 1.6e-31 140.6 223 43.5
CSS0029662 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 3.6e-31 139.4 205 44.9
Nn2g13566 Nelumbo nucifera HOM05D003987 ORTHO05D004532 6.1e-31 138.7 189 48.1
CAN.G351.10 Capsicum annuum HOM05D003987 ORTHO05D004532 1.4e-30 137.5 224 43.3
Sp4g20270 Schrenkiella parvula HOM05D003987 ORTHO05D004532 6.8e-30 135.2 217 41.5
Manes.09G100200 Manihot esculenta HOM05D003987 ORTHO05D004532 8.9e-30 134.8 142 54.9
TAR633G1447 Trochodendron aralioides HOM05D003987 ORTHO05D004532 1.2e-29 134.4 178 47.2
CANSAT78G1629 Cannabis sativa HOM05D003987 ORTHO05D004532 2.0e-29 133.7 214 43.0
Actinidia05340 Actinidia chinensis HOM05D003987 ORTHO05D004532 2.6e-29 133.3 245 39.2
PGR031G1271 Punica granatum HOM05D003987 ORTHO05D004532 4.4e-29 132.5 223 41.7
Hma1.2p1_0244F.1_g101070 Hydrangea macrophylla HOM05D003987 ORTHO05D004532 9.8e-29 131.3 211 43.6
MD12G1157700 Malus domestica HOM05D003987 ORTHO05D004532 9.8e-29 131.3 206 43.7
DCAR_028789 Daucus carota HOM05D003987 ORTHO05D004532 1.7e-28 130.6 219 40.2
vmacro08611 Vaccinium macrocarpon HOM05D003987 ORTHO05D004532 2.9e-28 129.8 219 40.6
Dinv04008 Davidia involucrata HOM05D003987 ORTHO05D004532 6.4e-28 128.6 138 53.6
Sed0025444 Sechium edule HOM05D003987 ORTHO05D004532 8.3e-28 128.3 173 46.8
MD04G1143500 Malus domestica HOM05D003987 ORTHO05D004532 1.1e-27 127.9 192 44.8
PGSC0003DMG400020336 Solanum tuberosum HOM05D003987 ORTHO05D004532 1.1e-27 127.9 213 43.2
PGSC0003DMG400019132 Solanum tuberosum HOM05D003987 ORTHO05D004532 1.9e-27 127.1 224 41.5
AL5G35070 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 7.0e-27 125.2 204 42.2
RcHm_v2.0_Chr3g0464181 Rosa chinensis HOM05D003987 ORTHO05D004532 1.2e-26 124.4 210 41.4
Oeu009906.1 Olea europaea HOM05D003987 ORTHO05D004532 1.6e-26 124.0 141 45.4
Glyma.07G142800 Glycine max HOM05D003987 ORTHO05D004532 2.7e-26 123.2 206 42.2
PSO339G5295 Papaver somniferum HOM05D003987 ORTHO05D004532 2.7e-26 123.2 214 39.3
Carub.0005s2065 Capsella rubella HOM05D003987 ORTHO05D004532 3.5e-26 122.9 176 43.2
Cc06_g01840 Coffea canephora HOM05D003987 ORTHO05D004532 3.5e-26 122.9 235 35.7
Thhalv10010371m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 4.6e-26 122.5 201 44.8
Solyc09g011820.4 Solanum lycopersicum HOM05D003987 ORTHO05D004532 4.6e-26 122.5 221 42.1
Sopen09g006640 Solanum pennellii HOM05D003987 ORTHO05D004532 4.6e-26 122.5 221 42.1
PSO384G1037 Papaver somniferum HOM05D003987 ORTHO05D004532 7.8e-26 121.7 215 39.1
SalBow3G0011 Salvia bowleyana HOM05D003987 ORTHO05D004532 7.8e-26 121.7 213 39.0
FAN09G0914 Fragaria x ananassa HOM05D003987 ORTHO05D004532 1.0e-25 121.3 252 37.7
Lj1g0003107 Lotus japonicus HOM05D003987 ORTHO05D004532 1.0e-25 121.3 226 39.4
CSS0016809 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 1.7e-25 120.6 167 44.9
arahy.Tifrunner.gnm1.ann1.B3S732 Arachis hypogaea HOM05D003987 ORTHO05D004532 2.3e-25 120.2 224 40.2
arahy.Tifrunner.gnm1.ann1.S0ZXK0 Arachis hypogaea HOM05D003987 ORTHO05D004532 3.0e-25 119.8 224 40.2
FAN02G3471 Fragaria x ananassa HOM05D003987 ORTHO05D004532 3.9e-25 119.4 252 37.3
FAN05G0535 Fragaria x ananassa HOM05D003987 ORTHO05D004532 3.9e-25 119.4 263 36.9
Nitab4.5_0002152g0110 Nicotiana tabacum HOM05D003987 ORTHO05D004532 5.0e-25 119.0 206 42.2
MBI14_g28607_MAGBIO Magnolia biondii HOM05D003987 ORTHO05D004532 6.6e-25 118.6 193 40.9
A04p29100 Brassica napus HOM05D003987 ORTHO05D004532 1.5e-24 117.5 206 42.7
FvH4_6g12360 Fragaria vesca HOM05D003987 ORTHO05D004532 1.5e-24 117.5 252 37.7
Aa31LG10G8760 Aethionema arabicum HOM05D003987 ORTHO05D004532 1.9e-24 117.1 160 46.9
Lj3g0003026 Lotus japonicus HOM05D003987 ORTHO05D004532 1.9e-24 117.1 218 41.3
AT3G54060 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 2.5e-24 116.7 195 42.1
Migut.J00243 Erythranthe guttata HOM05D003987 ORTHO05D004532 2.5e-24 116.7 205 41.0
Glyma.18G193700 Glycine max HOM05D003987 ORTHO05D004532 2.5e-24 116.7 206 42.2
Phvul.008G111900 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 3.3e-24 116.3 224 37.9
Lalb_Chr01g0022851 Lupinus albus HOM05D003987 ORTHO05D004532 4.3e-24 115.9 211 41.2
MSTRG.19041 Avicennia marina HOM05D003987 ORTHO05D004532 5.6e-24 115.5 221 37.1
VMungo1383G2510 Vigna mungo HOM05D003987 ORTHO05D004532 5.6e-24 115.5 207 40.1
BraA04t18380Z Brassica rapa HOM05D003987 ORTHO05D004532 7.3e-24 115.2 208 41.8
Sabra16G0105800 Salix brachista HOM05D003987 ORTHO05D004532 1.2e-23 114.4 136 47.8
Sopen10g036150 Solanum pennellii HOM05D003987 ORTHO05D004532 4.0e-22 109.4 225 36.9
BolC4t28137H Brassica oleracea HOM05D003987 ORTHO05D004532 5.2e-22 109.0 205 42.0
Lsat_1_v5_gn_9_33201 Lactuca sativa HOM05D003987 ORTHO05D004532 5.2e-22 109.0 205 39.0
TAR623G1001 Trochodendron aralioides HOM05D003987 ORTHO05D004532 1.2e-21 107.8 145 42.8
Oeu018344.1 Olea europaea HOM05D003987 ORTHO05D004532 2.0e-21 107.1 213 35.7
HanXRQChr01g0001271 Helianthus annuus HOM05D003987 ORTHO05D004532 2.6e-21 106.7 205 38.5
Peaxi162Scf00014g00921 Petunia axillaris HOM05D003987 ORTHO05D004532 2.6e-21 106.7 233 37.3
AUR62028348 Chenopodium quinoa HOM05D003987 ORTHO05D004532 3.4e-21 106.3 235 37.4
Aqoxy1G00765 Aquilegia oxysepala HOM05D003987 ORTHO05D004532 4.4e-21 105.9 242 38.0
BolC4t22577H Brassica oleracea HOM05D003987 ORTHO05D004532 9.8e-21 104.8 128 46.1
Hund08928 Selenicereus undatus HOM05D003987 ORTHO05D004532 9.8e-21 104.8 234 35.5
DCAR_012161 Daucus carota HOM05D003987 ORTHO05D004532 1.3e-20 104.4 211 35.5
A07p21960 Brassica napus HOM05D003987 ORTHO05D004532 2.2e-20 103.6 155 43.9
TPR.G8182 Trifolium pratense HOM05D003987 ORTHO05D004532 2.9e-20 103.2 208 37.5
BcaC08g44664 Brassica carinata HOM05D003987 ORTHO05D004532 8.3e-20 101.7 177 42.4
C06p21870 Brassica napus HOM05D003987 ORTHO05D004532 8.3e-20 101.7 177 42.4
Psat7g242560 Pisum sativum HOM05D003987 ORTHO05D004532 8.3e-20 101.7 216 35.2
BcaC02g11934 Brassica carinata HOM05D003987 ORTHO05D004532 1.1e-19 101.3 195 36.9
TWI74G0508 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 1.1e-19 101.3 106 50.0
BcaB02g09232 Brassica carinata HOM05D003987 ORTHO05D004532 1.4e-19 100.9 140 44.3
Sp5g08320 Schrenkiella parvula HOM05D003987 ORTHO05D004532 1.9e-19 100.5 193 39.4
C04p09710 Brassica napus HOM05D003987 ORTHO05D004532 2.4e-19 100.1 195 36.4
Lalb_Chr19g0124881 Lupinus albus HOM05D003987 ORTHO05D004532 3.2e-19 99.8 170 41.8
BraA05t19770Z Brassica rapa HOM05D003987 ORTHO05D004532 4.1e-19 99.4 155 43.2
A05p08030 Brassica napus HOM05D003987 ORTHO05D004532 7.0e-19 98.6 155 42.6
Solyc10g086740.3 Solanum lycopersicum HOM05D003987 ORTHO05D004532 2.7e-18 96.7 225 36.0
Ca_20115_v3 Cicer arietinum L. HOM05D003987 ORTHO05D004532 4.6e-18 95.9 217 36.9
Migut.L01985 Erythranthe guttata HOM05D003987 ORTHO05D004532 4.6e-18 95.9 149 38.3
BcaB02g07750 Brassica carinata HOM05D003987 ORTHO05D004532 1.0e-17 94.7 164 42.1
EL10Ac8g18936 Beta vulgaris HOM05D003987 ORTHO05D004532 1.3e-17 94.4 212 35.8
BraA07t29878Z Brassica rapa HOM05D003987 ORTHO05D004532 2.3e-17 93.6 181 40.3
Medtr4g019040 Medicago truncatula HOM05D003987 ORTHO05D004532 2.3e-17 93.6 208 35.1
AUR62025345 Chenopodium quinoa HOM05D003987 ORTHO05D004532 3.9e-17 92.8 248 35.1
Oeu044376.1 Olea europaea HOM05D003987 ORTHO05D004532 3.9e-17 92.8 133 41.4
Sp5g18210 Schrenkiella parvula HOM05D003987 ORTHO05D004532 5.1e-17 92.4 195 40.0
CARHR132510 Cardamine hirsuta HOM05D003987 ORTHO05D004532 8.6e-17 91.7 167 40.7
Psat6g189000 Pisum sativum HOM05D003987 ORTHO05D004532 1.5e-16 90.9 173 37.0
Actinidia01122 Actinidia chinensis HOM05D003987 ORTHO05D004532 7.3e-16 88.6 183 36.6
unitig_749.g14175 Utricularia gibba HOM05D003987 ORTHO05D004532 1.6e-15 87.4 184 39.7
Sc22g0004580 Simmondsia chinensis HOM05D003987 ORTHO05D004532 2.1e-15 87.0 222 33.3
Nitab4.5_0000008g0400 Nicotiana tabacum HOM05D003987 ORTHO05D004532 2.8e-15 86.7 111 48.6
THA.LOC104805691 Tarenaya hassleriana HOM05D003987 ORTHO05D004532 1.4e-14 84.3 162 39.5
arahy.Tifrunner.gnm1.ann1.84Z36X Arachis hypogaea HOM05D003987 ORTHO05D004532 5.2e-14 82.4 214 37.4
FAN14G4402 Fragaria x ananassa HOM05D003987 ORTHO05D004532 5.2e-14 82.4 155 37.4
ECA248G1591 Erigeron canadensis HOM05D003987 ORTHO05D004532 2.0e-13 80.5 213 35.7
CDE09G1167 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 2.2e-12 77.0 214 29.0
arahy.Tifrunner.gnm1.ann1.L5BN96 Arachis hypogaea HOM05D003987 ORTHO05D004532 8.3e-12 75.1 215 36.3
SGA_v2.0_scaffold75G24988 Striga asiatica HOM05D003987 ORTHO05D004532 1.4e-11 74.3 187 32.1
CDE02G0690 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 7.1e-11 72.0 240 29.6
Glyma.03G074167 Glycine max HOM05D003987 ORTHO05D004532 9.2e-11 71.6 149 36.9
HPP92_003415 Vanilla planifolia HOM05D003987 ORTHO05D004532 6.6e-09 65.5 134 36.6
arahy.Tifrunner.gnm1.ann1.C5KK4K Arachis hypogaea HOM05D003987 ORTHO05D004532 8.6e-09 65.1 161 38.5
Glyma.01G108800 Glycine max HOM05D003987 ORTHO05D004532 2.4e-06 57.0 126 33.3
Glyma.01G108900 Glycine max HOM05D003987 ORTHO05D004532 2.4e-06 57.0 126 33.3
Glyma.U031101 Glycine max HOM05D003987 ORTHO05D004532 2.4e-06 57.0 126 33.3


User provided reference genes

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