Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 2.0e-201 705.7 389 100.0
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 3.1e-37 160.2 419 37.9
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 2.8e-33 147.1 415 31.3
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 6.1e-33 146.0 405 31.6
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 8.0e-33 145.6 423 31.9
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 3.4e-31 140.2 409 31.1
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 5.7e-31 139.4 436 31.0
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 1.7e-30 137.9 418 31.1
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 1.1e-29 135.2 420 29.8
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.4e-29 134.8 419 30.3
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 9.2e-29 132.1 392 31.4
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.2e-28 131.7 392 31.4
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 1.6e-28 131.3 384 30.5
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.6e-28 131.3 389 31.6
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 2.0e-28 131.0 402 31.3
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 5.9e-28 129.4 407 30.5
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 5.9e-28 129.4 427 30.2
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 7.8e-28 129.0 440 29.3
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 1.7e-27 127.9 395 29.6
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 1.7e-27 127.9 152 48.0
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 8.6e-27 125.6 441 33.1
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 2.5e-26 124.0 224 37.9
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 3.3e-26 123.6 444 30.6
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 9.5e-26 122.1 425 31.3
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 3.6e-25 120.2 421 32.8
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 3.6e-25 120.2 382 28.3
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 4.7e-25 119.8 401 31.4
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.7e-25 119.8 144 47.9
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 6.2e-25 119.4 395 28.4
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.0e-24 118.6 383 30.8
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 1.4e-24 118.2 413 29.3
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 1.8e-24 117.9 153 45.8
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.8e-24 117.9 382 28.0
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.3e-24 117.5 407 31.2
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.3e-24 117.5 410 32.7
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 4.0e-24 116.7 429 28.7
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 1.2e-23 115.2 227 44.1
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 1.5e-23 114.8 405 32.3
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.0e-23 114.4 282 33.0
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 2.0e-23 114.4 241 34.4
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.0e-23 114.4 220 42.7
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 2.0e-23 114.4 427 34.4
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.3e-22 111.7 410 31.0
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 1.9e-21 107.8 326 31.0
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 5.4e-21 106.3 406 30.3
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 2.7e-20 104.0 420 27.4
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 7.8e-20 102.4 437 30.2
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.5e-18 98.2 214 34.6
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.5e-18 98.2 214 34.6
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 1.9e-18 97.8 150 40.0
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 7.3e-18 95.9 154 37.7
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 7.3e-18 95.9 236 32.6
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.2e-17 95.1 427 27.4
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 2.1e-17 94.4 424 26.7
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 2.8e-17 94.0 152 38.8
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 2.8e-17 94.0 423 27.2
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 8.1e-17 92.4 226 35.4
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 8.1e-17 92.4 226 35.4
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 8.1e-17 92.4 129 41.1
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 8.1e-17 92.4 163 40.5
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 1.4e-16 91.7 145 44.1
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 3.1e-16 90.5 150 42.7
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 4.0e-16 90.1 396 25.8
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 5.2e-16 89.7 238 31.9
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 8.9e-16 89.0 133 42.9
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 2.0e-15 87.8 156 37.2
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 2.0e-15 87.8 398 26.6
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 5.8e-15 86.3 151 37.7
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 9.8e-15 85.5 131 42.7
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 1.3e-14 85.1 149 40.9
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 3.7e-14 83.6 154 33.1
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 3.7e-14 83.6 151 35.8
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 3.7e-14 83.6 161 36.0
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.7e-14 83.6 152 36.2
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 4.9e-14 83.2 157 35.0
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 6.4e-14 82.8 129 41.9
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 1.1e-13 82.0 156 35.3
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 1.1e-13 82.0 167 36.5
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 1.9e-13 81.3 139 39.6
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 2.4e-13 80.9 161 36.0
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 2.4e-13 80.9 138 37.0
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 2.4e-13 80.9 129 44.2
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 3.2e-13 80.5 145 36.6
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 3.2e-13 80.5 373 24.4
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 3.2e-13 80.5 148 35.1
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 4.1e-13 80.1 152 36.8
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 5.4e-13 79.7 131 42.7
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 5.4e-13 79.7 164 35.4
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 5.4e-13 79.7 409 30.8
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 1.2e-12 78.6 154 40.3
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 1.2e-12 78.6 157 33.1
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 1.2e-12 78.6 157 33.1
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 1.6e-12 78.2 147 38.8
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.1e-12 77.8 392 25.8
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 2.1e-12 77.8 395 25.3
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 2.1e-12 77.8 146 35.6
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.7e-12 77.4 150 37.3
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 4.6e-12 76.6 424 26.7
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 6.0e-12 76.3 422 26.8
Aa31LG1G23030 Aethionema arabicum HOM05D013727 ORTHO05D003520 7.8e-12 75.9 168 35.7
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.0e-11 75.5 157 36.3
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.7e-11 74.7 158 33.5
BolC2t06018H Brassica oleracea HOM05D013727 ORTHO05D003520 3.0e-11 73.9 172 32.0
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 5.1e-11 73.2 153 36.6
CARHR211750 Cardamine hirsuta HOM05D013727 ORTHO05D003520 5.1e-11 73.2 184 34.8
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 6.6e-11 72.8 153 32.0
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 6.6e-11 72.8 391 23.0
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.1e-10 72.0 389 23.4
Thhalv10016075m.g Eutrema salsugineum HOM05D013727 ORTHO05D003520 1.1e-10 72.0 181 32.0
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 1.5e-10 71.6 151 35.8
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 1.9e-10 71.2 161 33.5
Carub.0006s0045 Capsella rubella HOM05D013727 ORTHO05D003520 2.5e-10 70.9 433 26.6
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.5e-10 70.9 157 32.5
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 7.3e-10 69.3 152 32.9
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 7.3e-10 69.3 160 31.9
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 7.3e-10 69.3 156 32.7
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 9.5e-10 68.9 145 34.5
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 9.5e-10 68.9 153 34.0
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 9.5e-10 68.9 162 31.5
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 9.5e-10 68.9 385 25.2
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 1.2e-09 68.6 406 23.9
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.2e-09 68.6 156 32.7
AL6G10750 Arabidopsis lyrata HOM05D013727 ORTHO05D003520 1.6e-09 68.2 317 27.1
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 1.6e-09 68.2 155 33.5
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.6e-09 68.2 150 34.7
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 2.1e-09 67.8 156 32.1
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.1e-09 67.8 150 34.0
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 2.8e-09 67.4 159 33.3
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 2.8e-09 67.4 131 34.4
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 2.8e-09 67.4 159 31.4
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 4.7e-09 66.6 152 37.5
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 6.2e-09 66.2 150 33.3
Sp6g40680 Schrenkiella parvula HOM05D013727 ORTHO05D003520 6.2e-09 66.2 159 34.0
AT5G01370 Arabidopsis thaliana HOM05D013727 ORTHO05D003520 8.1e-09 65.9 441 23.1
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 8.1e-09 65.9 151 33.1
Hund11000 Selenicereus undatus HOM05D046068 ORTHO05D003520 1.1e-08 65.5 136 36.0
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.3e-08 64.3 156 32.7
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 3.1e-08 63.9 420 25.5
Hund29902 Selenicereus undatus HOM05D046068 ORTHO05D003520 3.1e-08 63.9 136 35.3
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 4.0e-08 63.5 150 31.3
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 5.2e-08 63.2 125 37.6
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 6.8e-08 62.8 134 35.8
BraA02t04692Z Brassica rapa HOM05D013727 ORTHO05D003520 6.8e-08 62.8 159 33.3
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.2e-07 62.0 156 32.7
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.2e-07 62.0 154 36.4
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 2.0e-07 61.2 169 29.6
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 2.6e-07 60.8 157 31.8
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 2.6e-07 60.8 139 33.1
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 3.4e-07 60.5 145 33.8
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 4.4e-07 60.1 152 33.6
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 1.3e-06 58.5 149 31.5
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 2.2e-06 57.8 392 22.4
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 2.2e-06 57.8 234 27.4
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 2.9e-06 57.4 134 34.3
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 4.9e-06 56.6 383 23.5
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 4.9e-06 56.6 154 26.6


User provided reference genes

Program Settings