Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 4.1e-113 411.4 206 100.0
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 1.3e-85 320.1 201 77.1
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 2.8e-85 318.9 198 76.3
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 1.1e-84 317.0 199 75.9
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 5.3e-84 314.7 202 76.2
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 1.5e-83 313.2 202 73.3
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 5.8e-83 311.2 201 72.6
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 7.6e-83 310.8 201 73.6
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 8.4e-82 307.4 204 72.5
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 8.4e-82 307.4 201 72.6
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 1.9e-81 306.2 201 72.6
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 1.9e-81 306.2 201 72.6
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 2.5e-81 305.8 201 72.6
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 3.2e-81 305.4 199 71.4
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 5.5e-81 304.7 203 69.5
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 1.2e-80 303.5 201 72.6
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.6e-80 303.1 201 73.1
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 2.1e-80 302.8 203 69.5
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 2.7e-80 302.4 195 74.9
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 3.5e-80 302.0 198 72.7
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 3.5e-80 302.0 202 70.3
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 3.5e-80 302.0 208 72.1
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 4.6e-80 301.6 201 72.1
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.0e-79 300.4 201 70.1
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 1.8e-79 299.7 200 73.0
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 1.8e-79 299.7 203 72.4
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 2.3e-79 299.3 201 69.7
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 3.0e-79 298.9 203 69.0
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 3.9e-79 298.5 201 71.1
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 6.7e-79 297.7 203 68.5
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 8.7e-79 297.4 201 70.6
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 1.9e-78 296.2 203 69.0
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 1.9e-78 296.2 203 68.5
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 1.9e-78 296.2 203 68.5
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 1.9e-78 296.2 204 69.6
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 1.9e-78 296.2 201 70.6
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 1.9e-78 296.2 201 70.6
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 3.3e-78 295.4 191 72.8
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 5.7e-78 294.7 202 70.3
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 7.4e-78 294.3 199 72.9
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 2.1e-77 292.7 205 68.8
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 3.7e-77 292.0 203 68.0
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 4.8e-77 291.6 201 69.2
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 1.1e-76 290.4 191 74.9
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 1.4e-76 290.0 201 67.2
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 3.1e-76 288.9 191 72.8
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 4.1e-76 288.5 200 70.0
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 5.3e-76 288.1 202 66.3
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.2e-75 287.0 197 72.6
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 2.0e-75 286.2 202 67.3
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 1.7e-74 283.1 200 67.0
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 2.9e-74 282.3 203 67.0
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.5e-73 279.3 218 63.3
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.6e-72 276.6 199 65.8
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 2.1e-72 276.2 202 63.4
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 2.1e-72 276.2 221 62.0
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 2.7e-72 275.8 200 63.5
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.0e-71 273.9 233 57.9
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 1.0e-71 273.9 202 62.9
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 3.0e-71 272.3 175 73.7
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 3.9e-71 271.9 202 61.9
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 1.1e-70 270.4 199 63.3
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 5.7e-70 268.1 197 62.9
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 7.4e-70 267.7 199 64.3
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 1.6e-69 266.5 217 60.8
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 2.2e-69 266.2 198 62.6
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 2.8e-69 265.8 196 63.8
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 3.7e-69 265.4 209 61.7
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 6.3e-69 264.6 197 62.4
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 8.2e-69 264.2 197 64.5
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.4e-68 262.7 186 67.2
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 5.3e-68 261.5 180 70.6
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 9.1e-68 260.8 188 66.5
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 5.0e-66 255.0 193 63.2
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 1.1e-65 253.8 199 64.3
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.2e-64 250.4 200 61.0
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 3.6e-64 248.8 197 62.4
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 4.6e-64 248.4 198 59.1
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 2.8e-61 239.2 175 65.1
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 2.6e-59 232.6 196 57.7
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 2.2e-58 229.6 197 55.3
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 4.2e-57 225.3 156 67.9
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 1.2e-56 223.8 155 69.0
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 3.6e-56 222.2 156 67.9
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 2.2e-50 203.0 130 73.8
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 8.5e-50 201.1 138 69.6
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 8.8e-47 191.0 145 69.7
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 9.7e-46 187.6 199 50.3
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 1.7e-45 186.8 199 47.2
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 4.8e-45 185.3 168 53.0
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 1.3e-42 177.2 125 66.4
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 1.3e-42 177.2 125 66.4
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 1.5e-41 173.7 127 67.7
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 2.7e-40 169.5 189 44.4
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 2.0e-38 163.3 164 53.7
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 2.2e-37 159.8 197 42.6
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.2e-35 154.1 187 39.0
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 5.9e-35 151.8 128 55.5
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 9.8e-30 134.4 128 49.2
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 3.1e-28 129.4 115 55.7
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 3.1e-28 129.4 180 42.8
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 1.2e-24 117.5 84 67.9
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.2e-22 110.9 63 77.8
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 2.2e-21 106.7 76 68.4
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 3.7e-21 105.9 159 40.9
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 6.4e-21 105.1 88 61.4
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 3.2e-20 102.8 80 61.2
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 8.6e-18 94.7 87 52.9
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 9.5e-17 91.3 146 34.2
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 2.8e-16 89.7 61 67.2
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 1.1e-15 87.8 108 52.8
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 1.2e-11 74.3 159 34.6
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 1.2e-08 64.3 43 74.4
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 1.2e-08 64.3 41 65.9
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 4.7e-08 62.4 37 73.0
AagrBONN_evm.TU.Sc2ySwM_228.148 Anthoceros agrestis HOM05D004675 ORTHO05D005631 3.4e-06 56.2 142 27.5
Cre08.g380400 Chlamydomonas reinhardtii HOM05D004675 ORTHO05D005631 5.8e-06 55.5 185 21.6
MCO02G468 Micromonas commoda HOM05D006956 ORTHO05D008824 7.5e-06 55.1 85 37.6
Sed0023640 Sechium edule HOM05D004675 ORTHO05D005631 9.9e-06 54.7 171 23.4
SGA_v2.0_scaffold62G21353 Striga asiatica HOM05D058974 ORTHO05D402092 9.9e-06 54.7 32 81.2


User provided reference genes

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