Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00489 Eucalyptus grandis HOM05D000274 ORTHO05D002552 1.2e-32 142.5 71 100.0
PGR111G0023 Punica granatum HOM05D000274 ORTHO05D002552 1.0e-10 69.7 76 52.6
Eucgr.I00671 Eucalyptus grandis HOM05D000274 ORTHO05D002552 1.7e-10 68.9 87 49.4
ATCG00670 Arabidopsis thaliana HOM05D000274 ORTHO05D002552 5.1e-10 67.4 76 52.6
RcHm_v2.0_CPg0501991 Rosa chinensis HOM05D000274 ORTHO05D002552 6.6e-10 67.0 83 48.2
Sed0002260 Sechium edule HOM05D000274 ORTHO05D002552 6.6e-10 67.0 76 51.3
Sed0019404 Sechium edule HOM05D000274 ORTHO05D002552 6.6e-10 67.0 76 51.3
Sed0022936 Sechium edule HOM05D000274 ORTHO05D002552 6.6e-10 67.0 76 51.3
CARHR282180 Cardamine hirsuta HOM05D000274 ORTHO05D002552 8.6e-10 66.6 75 53.3
Cfa021574 Carpinus fangiana HOM05D000274 ORTHO05D002552 8.6e-10 66.6 75 53.3
Gohir.A05G285000 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.1e-09 66.2 74 51.4
Gohir.A12G229201 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.1e-09 66.2 74 51.4
Gohir.D01G102021 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.1e-09 66.2 74 51.4
Gohir.D06G018300 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.1e-09 66.2 75 50.7
Gorai.009G282800 Gossypium raimondii HOM05D000274 ORTHO05D002552 1.1e-09 66.2 74 51.4
arahy.Tifrunner.gnm1.ann1.002YPW Arachis hypogaea HOM05D000274 ORTHO05D002552 1.5e-09 65.9 75 52.0
arahy.Tifrunner.gnm1.ann1.H8UXH3 Arachis hypogaea HOM05D000274 ORTHO05D002552 1.5e-09 65.9 75 52.0
BNapus_Darmor_BZH_scaffold_287p00220 Brassica napus HOM05D000274 ORTHO05D002552 1.5e-09 65.9 77 51.9
C02p43600 Brassica napus HOM05D000274 ORTHO05D002552 1.5e-09 65.9 77 51.9
C06p22930 Brassica napus HOM05D000274 ORTHO05D002552 1.5e-09 65.9 77 51.9
C06p23060 Brassica napus HOM05D000274 ORTHO05D002552 1.5e-09 65.9 77 51.9
Sc24g0000880 Simmondsia chinensis HOM05D000274 ORTHO05D002552 1.5e-09 65.9 74 51.4
AL2G21640 Arabidopsis lyrata HOM05D000274 ORTHO05D002552 1.9e-09 65.5 75 52.0
arahy.Tifrunner.gnm1.ann1.3I6E4U Arachis hypogaea HOM05D000274 ORTHO05D002552 1.9e-09 65.5 75 50.7
arahy.Tifrunner.gnm1.ann1.JE9GG4 Arachis hypogaea HOM05D000274 ORTHO05D002552 1.9e-09 65.5 75 50.7
Lalb_Chr07g0192041 Lupinus albus HOM05D000274 ORTHO05D002552 1.9e-09 65.5 75 52.0
Sed0002969 Sechium edule HOM05D000274 ORTHO05D002552 1.9e-09 65.5 68 54.4
Sc02g0004580 Simmondsia chinensis HOM05D000274 ORTHO05D002552 1.9e-09 65.5 75 49.3
MELO3C027089.2 Cucumis melo HOM05D000274 ORTHO05D002552 2.5e-09 65.1 74 51.4
Gohir.D01G169088 Gossypium hirsutum HOM05D000274 ORTHO05D002552 2.5e-09 65.1 71 52.1
EL10Ac5g13040 Beta vulgaris HOM05D000274 ORTHO05D002552 3.3e-09 64.7 77 48.1
EL10As12g24030 Beta vulgaris HOM05D000274 ORTHO05D002552 3.3e-09 64.7 77 48.1
PSO548G0031 Papaver somniferum HOM05D000274 ORTHO05D002552 3.3e-09 64.7 75 48.0
C09p40540 Brassica napus HOM05D000274 ORTHO05D002552 4.3e-09 64.3 77 50.6
BraSC103t45477Z Brassica rapa HOM05D000274 ORTHO05D002552 4.3e-09 64.3 80 50.0
C02p28700 Brassica napus HOM05D000274 ORTHO05D002552 5.6e-09 63.9 75 52.0
BolSC29t60600H Brassica oleracea HOM05D000274 ORTHO05D002552 5.6e-09 63.9 75 52.0
BolSC35t60659H Brassica oleracea HOM05D000274 ORTHO05D002552 5.6e-09 63.9 75 52.0
BolSC46t61010H Brassica oleracea HOM05D000274 ORTHO05D002552 5.6e-09 63.9 75 52.0
BraSC138t45563Z Brassica rapa HOM05D000274 ORTHO05D002552 5.6e-09 63.9 75 52.0
Phvul.002G090301 Phaseolus vulgaris HOM05D000274 ORTHO05D002552 5.6e-09 63.9 75 52.0
C04p42950 Brassica napus HOM05D000274 ORTHO05D002552 7.3e-09 63.5 75 52.0
BolC4t25865H Brassica oleracea HOM05D000274 ORTHO05D002552 7.3e-09 63.5 75 52.0
DCAR_032510 Daucus carota HOM05D000274 ORTHO05D002552 7.3e-09 63.5 74 50.0
LjContig00318g0024179 Lotus japonicus HOM05D000274 ORTHO05D002552 9.5e-09 63.2 75 50.7
SalBow1G7090 Salvia bowleyana HOM05D000274 ORTHO05D002552 9.5e-09 63.2 75 49.3
Sc09g0009710 Simmondsia chinensis HOM05D000274 ORTHO05D002552 9.5e-09 63.2 74 50.0
Gohir.A10G134850 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.2e-08 62.8 75 46.7
Gohir.D06G104800 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.2e-08 62.8 74 48.6
Gohir.D06G113800 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.2e-08 62.8 74 50.0
arahy.Tifrunner.gnm1.ann1.8S8FMR Arachis hypogaea HOM05D000274 ORTHO05D002552 1.6e-08 62.4 72 51.4
arahy.Tifrunner.gnm1.ann1.KX9QRC Arachis hypogaea HOM05D000274 ORTHO05D002552 1.6e-08 62.4 72 51.4
BcaC03g15273 Brassica carinata HOM05D000274 ORTHO05D002552 1.6e-08 62.4 74 51.4
BcaC07g42433 Brassica carinata HOM05D000274 ORTHO05D002552 1.6e-08 62.4 74 51.4
Gohir.D09G093050 Gossypium hirsutum HOM05D000274 ORTHO05D002552 2.1e-08 62.0 80 46.2
Gorai.002G210500 Gossypium raimondii HOM05D000274 ORTHO05D002552 2.8e-08 61.6 71 50.7
Nitab4.5_0010531g0050 Nicotiana tabacum HOM05D000274 ORTHO05D002552 2.8e-08 61.6 74 45.9
BcaB02g11359 Brassica carinata HOM05D000274 ORTHO05D002552 3.6e-08 61.2 67 53.7
EL10Ac1g01196 Beta vulgaris HOM05D000274 ORTHO05D002552 4.7e-08 60.8 72 50.0
SabraPtG0003900 Salix brachista HOM05D000274 ORTHO05D002552 4.7e-08 60.8 75 45.3
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 6.2e-08 60.5 71 49.3
MBI14_g38260_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 8.1e-08 60.1 71 50.7
Gohir.D07G185750 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.1e-07 59.7 67 50.7
SalBow6G1627 Salvia bowleyana HOM05D000274 ORTHO05D002552 1.1e-07 59.7 74 47.3
EL10Ac1g01444 Beta vulgaris HOM05D000274 ORTHO05D002552 1.8e-07 58.9 77 45.5
RcHm_v2.0_Chr6g0260431 Rosa chinensis HOM05D000274 ORTHO05D002552 1.8e-07 58.9 67 50.7
ATR0303G006 Amborella trichopoda HOM05D000274 ORTHO05D002552 2.4e-07 58.5 75 48.0
EL10As15g24108 Beta vulgaris HOM05D000274 ORTHO05D002552 3.1e-07 58.2 66 48.5
HanXRQChr04g0094301 Helianthus annuus HOM05D000274 ORTHO05D002552 3.1e-07 58.2 77 46.8
MD11G1294400 Malus domestica HOM05D000274 ORTHO05D002552 3.1e-07 58.2 77 46.8
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 5.2e-07 57.4 65 50.8
Gorai.002G264000 Gossypium raimondii HOM05D000274 ORTHO05D002552 6.8e-07 57.0 65 49.2
ATR1132G067 Amborella trichopoda HOM05D000274 ORTHO05D002552 1.2e-06 56.2 73 45.2
ECA074G0006 Erigeron canadensis HOM05D000274 ORTHO05D002552 1.2e-06 56.2 75 46.7
Gorai.010G140000 Gossypium raimondii HOM05D000274 ORTHO05D002552 1.5e-06 55.8 65 46.2
Lalb_Chr03g0038761 Lupinus albus HOM05D000274 ORTHO05D002552 1.5e-06 55.8 74 47.3
HanXRQChr10g0283621 Helianthus annuus HOM05D000274 ORTHO05D002552 2.0e-06 55.5 77 45.5
HanXRQChr10g0284311 Helianthus annuus HOM05D000274 ORTHO05D002552 2.0e-06 55.5 77 45.5
HanXRQChr10g0318131 Helianthus annuus HOM05D000274 ORTHO05D002552 2.0e-06 55.5 77 45.5
HanXRQChr11g0326901 Helianthus annuus HOM05D000274 ORTHO05D002552 2.0e-06 55.5 77 45.5
HanXRQCPg0580111 Helianthus annuus HOM05D000274 ORTHO05D002552 2.0e-06 55.5 77 45.5
COL.COLO4_02977 Corchorus olitorius HOM05D000274 ORTHO05D002552 2.6e-06 55.1 77 42.9
COL.COLO4_03028 Corchorus olitorius HOM05D000274 ORTHO05D002552 2.6e-06 55.1 77 42.9
COL.COLO4_03061 Corchorus olitorius HOM05D000274 ORTHO05D002552 2.6e-06 55.1 77 42.9
COL.COLO4_04073 Corchorus olitorius HOM05D000274 ORTHO05D002552 2.6e-06 55.1 77 42.9
MBI06_g25326_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 2.6e-06 55.1 74 43.2
CAN.G1739.8 Capsicum annuum HOM05D000274 ORTHO05D002552 3.4e-06 54.7 75 46.7
Gohir.D01G217650 Gossypium hirsutum HOM05D000274 ORTHO05D002552 3.4e-06 54.7 65 47.7
HanXRQChr04g0095101 Helianthus annuus HOM05D000274 ORTHO05D002552 5.8e-06 53.9 77 44.2
HanXRQChr11g0345211 Helianthus annuus HOM05D000274 ORTHO05D002552 5.8e-06 53.9 77 45.5
Lsat_1_v5_gn_9_50981 Lactuca sativa HOM05D000274 ORTHO05D002552 5.8e-06 53.9 75 45.3
HanXRQChr00c0314g0573521 Helianthus annuus HOM05D000274 ORTHO05D002552 7.6e-06 53.5 75 45.3
HanXRQChr01g0020281 Helianthus annuus HOM05D000274 ORTHO05D002552 7.6e-06 53.5 75 45.3
HanXRQChr10g0289321 Helianthus annuus HOM05D000274 ORTHO05D002552 7.6e-06 53.5 75 45.3
BolC7t41719H Brassica oleracea HOM05D000274 ORTHO05D002552 9.9e-06 53.1 84 41.7


User provided reference genes

Program Settings