Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 7.8e-129 463.8 228 100.0
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 1.5e-92 343.2 215 75.3
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 4.9e-91 338.2 218 71.1
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 1.1e-90 337.0 213 71.8
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 1.1e-90 337.0 214 73.4
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 5.5e-90 334.7 214 73.4
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 1.2e-89 333.6 213 70.9
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 7.9e-89 330.9 227 68.3
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.3e-88 330.1 229 67.2
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 1.8e-88 329.7 215 67.9
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 1.8e-88 329.7 226 66.8
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.5e-87 326.6 210 71.0
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 2.5e-87 325.9 227 67.0
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 2.5e-87 325.9 227 66.1
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 3.3e-87 325.5 210 69.5
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 4.3e-87 325.1 210 69.0
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 9.6e-87 323.9 210 71.0
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 9.6e-87 323.9 210 69.0
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 2.1e-86 322.8 227 67.4
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 3.7e-86 322.0 225 66.7
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 4.8e-86 321.6 212 70.3
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 4.8e-86 321.6 214 68.7
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 6.2e-86 321.2 211 71.6
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 8.2e-86 320.9 214 69.6
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.1e-85 320.5 213 69.5
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.8e-85 319.7 215 70.7
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 2.4e-85 319.3 211 69.7
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 3.1e-85 318.9 211 69.2
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 3.1e-85 318.9 205 72.7
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 4.0e-85 318.5 225 65.8
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 6.9e-85 317.8 212 69.8
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 6.9e-85 317.8 212 69.8
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 6.9e-85 317.8 213 68.5
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 9.0e-85 317.4 216 68.1
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 1.2e-84 317.0 215 67.9
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 1.2e-84 317.0 227 64.3
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.5e-84 316.6 227 65.2
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 1.5e-84 316.6 216 65.7
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.5e-84 316.6 221 68.8
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 4.5e-84 315.1 226 65.5
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 5.8e-84 314.7 224 65.2
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 7.6e-84 314.3 219 67.1
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 7.6e-84 314.3 216 66.7
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 1.0e-83 313.9 213 65.7
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.0e-83 313.9 218 67.0
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 1.3e-83 313.5 211 68.2
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 2.9e-83 312.4 210 70.0
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.9e-83 312.4 214 69.6
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 3.8e-83 312.0 209 70.3
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 4.9e-83 311.6 218 67.9
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 4.9e-83 311.6 210 67.6
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 8.4e-83 310.8 216 66.2
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 1.4e-82 310.1 223 63.2
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.4e-82 310.1 226 65.5
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 7.1e-82 307.8 237 62.9
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 7.1e-82 307.8 195 74.9
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 9.3e-82 307.4 216 66.7
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 1.2e-81 307.0 214 66.4
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 4.6e-81 305.1 215 65.6
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 6.1e-81 304.7 215 67.0
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 1.8e-80 303.1 222 62.6
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 3.0e-80 302.4 216 63.4
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.1e-79 300.4 211 64.9
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 1.5e-79 300.1 213 66.2
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 2.5e-79 299.3 218 63.3
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 3.3e-79 298.9 216 63.9
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 5.7e-79 298.1 218 62.4
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 1.6e-78 296.6 211 64.5
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 3.7e-78 295.4 218 65.6
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.4e-77 293.5 219 62.6
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 2.4e-77 292.7 218 61.0
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 3.1e-77 292.4 213 62.9
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 3.1e-77 292.4 208 64.9
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 4.1e-77 292.0 219 61.6
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 4.1e-77 292.0 219 61.6
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 4.1e-77 292.0 219 61.6
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 4.1e-77 292.0 218 61.5
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 6.9e-77 291.2 219 62.1
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.5e-76 290.0 217 61.3
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 2.6e-76 289.3 219 60.7
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 3.4e-76 288.9 226 59.3
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 1.3e-75 287.0 218 64.2
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 6.5e-75 284.6 220 62.3
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.4e-74 283.5 215 62.3
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 9.4e-74 280.8 211 60.2
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 1.2e-73 280.4 269 51.7
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 4.6e-73 278.5 198 64.6
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 1.8e-72 276.6 218 60.6
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 5.1e-72 275.0 214 59.8
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 2.0e-71 273.1 225 55.6
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 2.8e-70 269.2 219 58.9
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 3.4e-68 262.3 212 55.2
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 1.0e-67 260.8 218 58.7
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 3.8e-67 258.8 175 67.4
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.9e-66 256.5 175 68.6
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.4e-64 250.4 174 67.2
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 1.1e-63 247.3 181 64.6
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 2.0e-63 246.5 221 52.0
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.3e-62 243.8 248 48.0
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.1e-61 240.7 216 54.6
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.8e-61 240.0 206 58.3
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 4.5e-60 235.3 175 61.7
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 3.9e-56 222.2 213 50.2
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.1e-55 220.7 212 50.0
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.5e-55 220.3 152 69.7
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.6e-55 219.5 215 52.6
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 1.3e-54 217.2 217 46.5
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 3.7e-54 215.7 160 60.0
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 4.8e-54 215.3 210 48.1
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 2.6e-52 209.5 212 48.6
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 2.2e-51 206.5 216 47.2
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 8.5e-51 204.5 218 49.5
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 1.5e-50 203.8 162 60.5
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 3.4e-47 192.6 177 55.4
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 1.2e-44 184.1 136 62.5
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.5e-39 164.9 161 52.2
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 8.3e-38 161.4 113 67.3
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 1.2e-28 131.0 219 32.0
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 7.8e-28 128.3 87 66.7
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 1.0e-27 127.9 131 48.1
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 7.0e-21 105.1 93 55.9
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 7.8e-20 101.7 221 29.9
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 7.5e-15 85.1 56 67.9
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 7.8e-12 75.1 97 42.3
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 1.1e-10 71.2 56 57.1
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 1.9e-10 70.5 43 69.8
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 1.9e-10 70.5 118 31.4
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 2.0e-07 60.5 50 48.0
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 2.6e-07 60.1 40 65.0


User provided reference genes

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