Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 6.8e-81 304.7 192 100.0
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 4.6e-61 238.8 164 79.9
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 2.3e-60 236.5 156 80.1
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 4.3e-59 232.3 156 80.8
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 5.6e-59 231.9 154 80.5
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 1.6e-58 230.3 149 82.6
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 2.8e-58 229.6 164 76.8
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 2.8e-58 229.6 149 83.2
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 2.8e-58 229.6 168 75.6
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 3.7e-58 229.2 164 78.0
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 4.8e-58 228.8 152 81.6
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 6.2e-58 228.4 164 77.4
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 1.1e-57 227.6 165 78.8
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 1.4e-57 227.3 154 81.2
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 1.4e-57 227.3 154 81.2
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 5.3e-57 225.3 148 81.8
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 6.9e-57 224.9 172 72.7
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 9.0e-57 224.6 152 80.3
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 9.0e-57 224.6 153 81.7
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 1.2e-56 224.2 165 73.9
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 1.2e-56 224.2 158 78.5
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 2.0e-56 223.4 156 77.6
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 2.0e-56 223.4 154 77.9
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 3.4e-56 222.6 151 81.5
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 4.5e-56 222.2 156 78.2
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 4.5e-56 222.2 153 79.1
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 5.8e-56 221.9 149 81.2
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 5.8e-56 221.9 156 76.9
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 5.8e-56 221.9 154 74.7
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 5.8e-56 221.9 149 79.9
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 1.0e-55 221.1 153 77.8
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 1.0e-55 221.1 154 75.3
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 1.0e-55 221.1 148 79.7
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 1.7e-55 220.3 165 77.0
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 1.7e-55 220.3 154 76.6
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 2.2e-55 219.9 158 77.8
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 2.2e-55 219.9 158 77.8
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 2.9e-55 219.5 149 80.5
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 2.9e-55 219.5 151 76.8
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 2.9e-55 219.5 145 81.4
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 3.8e-55 219.2 146 77.4
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 3.8e-55 219.2 158 75.3
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 4.9e-55 218.8 144 80.6
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 4.9e-55 218.8 149 78.5
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 4.9e-55 218.8 153 78.4
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 6.5e-55 218.4 154 78.6
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 6.5e-55 218.4 144 81.2
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 8.4e-55 218.0 152 79.6
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 8.4e-55 218.0 139 82.0
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 1.4e-54 217.2 152 77.0
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.9e-54 216.9 157 77.1
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 1.9e-54 216.9 148 77.7
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 1.9e-54 216.9 144 79.9
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 2.5e-54 216.5 153 77.8
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 2.5e-54 216.5 151 77.5
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 2.5e-54 216.5 149 77.9
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 2.5e-54 216.5 144 80.6
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 2.5e-54 216.5 158 75.9
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 3.2e-54 216.1 154 79.2
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 3.2e-54 216.1 151 77.5
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 4.2e-54 215.7 152 78.3
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 5.5e-54 215.3 151 76.8
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 5.5e-54 215.3 156 76.3
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 7.1e-54 214.9 144 78.5
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 7.1e-54 214.9 138 82.6
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 9.3e-54 214.5 145 80.0
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.2e-53 214.2 151 76.8
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 1.2e-53 214.2 143 77.6
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 1.6e-53 213.8 131 85.5
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 1.6e-53 213.8 149 77.9
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 1.6e-53 213.8 157 77.7
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 1.6e-53 213.8 157 77.7
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 1.6e-53 213.8 155 77.4
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 3.5e-53 212.6 145 80.0
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 3.5e-53 212.6 150 77.3
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 3.5e-53 212.6 149 75.8
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 4.6e-53 212.2 156 73.7
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 4.6e-53 212.2 151 76.8
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 1.0e-52 211.1 132 86.4
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.3e-52 210.7 154 76.6
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 1.3e-52 210.7 132 87.1
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 2.3e-52 209.9 132 86.4
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 3.9e-52 209.1 153 73.2
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 3.9e-52 209.1 154 75.3
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 3.9e-52 209.1 144 77.8
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 3.9e-52 209.1 144 77.8
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 6.7e-52 208.4 140 80.7
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 6.7e-52 208.4 140 80.7
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 8.7e-52 208.0 144 79.9
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 1.5e-51 207.2 138 80.4
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 1.5e-51 207.2 132 83.3
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 1.9e-51 206.8 197 65.0
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 2.5e-51 206.5 141 76.6
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 4.3e-51 205.7 170 70.6
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 4.3e-51 205.7 151 74.8
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 5.7e-51 205.3 158 75.9
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 7.4e-51 204.9 158 74.1
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 9.6e-51 204.5 167 71.3
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 1.3e-50 204.1 158 72.8
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 2.1e-50 203.4 151 74.8
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 2.8e-50 203.0 158 72.8
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 6.3e-50 201.8 137 81.0
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 1.1e-49 201.1 156 69.9
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 1.8e-49 200.3 156 69.2
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 2.4e-49 199.9 134 81.3
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 3.1e-49 199.5 158 72.8
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 9.0e-49 198.0 131 83.2
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 2.6e-48 196.4 137 77.4
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 2.6e-48 196.4 137 77.4
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 3.4e-48 196.1 137 77.4
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 4.5e-48 195.7 156 71.2
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 7.6e-48 194.9 167 66.5
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 1.0e-47 194.5 136 77.9
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.3e-47 194.1 166 68.7
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.3e-47 194.1 166 68.7
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 1.7e-47 193.7 156 70.5
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 1.7e-47 193.7 156 70.5
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 2.2e-47 193.4 168 67.9
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 2.2e-47 193.4 147 71.4
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 2.9e-47 193.0 154 71.4
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 2.9e-47 193.0 154 71.4
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 2.9e-47 193.0 154 71.4
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 2.9e-47 193.0 160 69.4
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 5.0e-47 192.2 170 66.5
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 5.0e-47 192.2 147 71.4
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 1.4e-46 190.7 148 71.6
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 4.6e-45 185.7 147 71.4
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 2.3e-44 183.3 136 75.7
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 3.0e-44 183.0 145 73.1
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 1.1e-43 181.0 165 69.7
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 1.4e-41 174.1 161 64.6
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 3.1e-41 172.9 131 73.3
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 3.1e-41 172.9 114 82.5
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 2.0e-40 170.2 136 67.6
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 6.5e-39 165.2 133 67.7
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 8.5e-39 164.9 124 70.2
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 1.1e-35 154.5 121 74.4
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 2.0e-32 143.7 136 63.2
MBI19_g17409_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 3.8e-31 139.4 158 58.9
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 2.5e-30 136.7 92 85.9
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 6.1e-29 132.1 127 57.5
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 7.9e-29 131.7 107 66.4
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 5.1e-28 129.0 134 59.0
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 2.8e-26 123.2 112 63.4
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 5.0e-23 112.5 144 51.4
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 4.2e-22 109.4 150 49.3
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 9.4e-22 108.2 141 51.1
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 1.6e-21 107.5 157 52.9
ATR1159G054 Amborella trichopoda HOM05D001765 ORTHO05D005876 8.0e-21 105.1 107 53.3
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 5.2e-20 102.4 83 71.1
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 8.8e-20 101.7 72 80.6
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 8.8e-20 101.7 72 80.6
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 9.1e-17 91.7 73 74.0
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.1e-14 84.7 66 80.3
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.6e-13 80.9 64 76.6


User provided reference genes

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