Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 3.7e-249 864.4 425 100.0
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 1.6e-167 593.2 419 69.7
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 1.1e-163 580.5 419 68.7
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 6.9e-163 577.8 402 71.6
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 4.5e-162 575.1 421 68.4
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 5.8e-162 574.7 421 69.1
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 1.3e-161 573.5 416 68.0
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 1.9e-160 569.7 423 68.8
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 3.2e-160 568.9 418 68.7
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 4.2e-160 568.5 423 68.3
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.2e-159 567.0 422 67.3
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 2.1e-159 566.2 417 68.1
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 6.0e-159 564.7 423 67.4
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.3e-158 563.5 426 68.1
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.8e-158 563.1 423 67.1
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 1.8e-158 563.1 427 67.9
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 6.7e-158 561.2 417 68.1
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 1.1e-155 553.9 413 69.5
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 1.4e-155 553.5 423 67.4
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 4.1e-155 552.0 426 66.0
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 1.9e-152 543.1 433 64.2
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 7.9e-151 537.7 424 63.7
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 1.0e-150 537.3 448 62.7
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 1.4e-150 537.0 426 65.7
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 5.1e-150 535.0 425 64.9
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 8.8e-150 534.3 420 66.2
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 9.7e-149 530.8 420 64.5
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 1.1e-147 527.3 407 66.3
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 5.3e-147 525.0 416 64.4
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 9.1e-147 524.2 428 64.5
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 1.2e-146 523.9 431 64.0
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 2.0e-146 523.1 407 65.1
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 4.5e-146 521.9 418 63.6
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.7e-145 520.0 426 62.9
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 2.2e-145 519.6 394 66.5
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 3.2e-144 515.8 416 63.9
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 2.1e-143 513.1 419 64.0
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 7.9e-143 511.1 441 61.5
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 7.9e-143 511.1 382 68.1
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 1.1e-141 507.3 419 61.3
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 1.5e-141 506.9 420 61.0
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 2.0e-141 506.5 417 61.6
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 2.6e-141 506.1 419 63.0
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 7.4e-141 504.6 391 62.7
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 2.8e-140 502.7 423 60.8
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 8.2e-140 501.1 394 63.7
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 3.1e-139 499.2 376 67.6
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 5.9e-138 495.0 407 63.1
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 1.7e-137 493.4 423 61.5
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 8.0e-135 484.6 390 61.8
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.4e-134 483.8 423 61.2
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 8.8e-134 481.1 408 59.3
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 2.0e-133 479.9 408 60.5
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 7.4e-133 478.0 430 57.7
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 5.3e-131 471.9 343 68.5
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.3e-129 467.2 418 57.2
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.9e-128 463.4 413 57.1
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 2.7e-127 459.5 423 57.2
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 2.3e-126 456.4 381 61.2
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 1.3e-124 450.7 433 57.7
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.8e-123 446.8 407 57.7
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 1.3e-121 440.7 377 59.7
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 6.1e-119 431.8 406 56.9
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 9.8e-117 424.5 340 62.6
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 1.8e-115 420.2 307 68.4
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.3e-112 409.5 309 66.3
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 4.2e-112 409.1 425 53.6
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 4.2e-112 409.1 198 99.5
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 3.0e-110 402.9 446 52.5
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 6.8e-110 401.7 309 66.3
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.8e-107 393.7 293 66.2
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 2.7e-106 389.8 341 60.7
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 1.2e-101 374.4 298 64.8
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 5.8e-101 372.1 431 48.3
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 2.2e-100 370.2 382 53.4
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 2.3e-97 360.1 442 48.9
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 5.2e-94 349.0 379 47.8
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.1e-90 337.0 331 51.1
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 4.0e-86 322.8 351 48.7
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 2.7e-82 310.1 205 71.7
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 5.1e-81 305.8 297 54.2
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.4e-75 287.7 225 62.2
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 1.5e-72 277.7 398 41.2
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.4e-70 270.4 430 38.8
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.2e-61 241.5 241 53.9
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 6.4e-60 235.7 200 62.0
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 1.9e-59 234.2 277 49.1
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 3.4e-45 186.8 187 52.4
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 2.9e-44 183.7 130 71.5
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 8.2e-39 165.6 132 60.6
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 2.1e-34 151.0 131 64.9
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 5.7e-32 142.9 124 57.3
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 6.3e-31 139.4 115 60.9
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 5.0e-28 129.8 102 65.7
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 3.2e-27 127.1 129 52.7
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.5e-19 101.7 110 47.3
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.7e-18 97.4 122 45.9
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.7e-18 97.4 122 45.9
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 1.0e-17 95.5 83 59.0
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 5.3e-14 83.2 67 64.2
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 9.4e-11 72.4 90 46.7
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 1.6e-10 71.6 57 66.7
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 1.0e-09 68.9 39 87.2
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 4.0e-09 67.0 60 60.0
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 8.3e-07 59.3 62 51.6


User provided reference genes

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