Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00279 Eucalyptus grandis HOM05D009929 ORTHO05D009358 4.8e-38 160.6 78 100.0
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 9.5e-10 66.6 57 59.6
AT3G59430 Arabidopsis thaliana HOM05D009929 ORTHO05D009358 3.6e-09 64.7 53 60.4
BcaC07g40284 Brassica carinata HOM05D009929 ORTHO05D009358 2.0e-07 58.9 42 66.7
BcaC07g40472 Brassica carinata HOM05D009929 ORTHO05D009358 2.0e-07 58.9 49 59.2
A09p51710 Brassica napus HOM05D009929 ORTHO05D009358 2.0e-07 58.9 42 66.7
C08p34440 Brassica napus HOM05D009929 ORTHO05D009358 2.0e-07 58.9 42 66.7
BolC8t51045H Brassica oleracea HOM05D009929 ORTHO05D009358 2.0e-07 58.9 42 66.7
BraA09t40607Z Brassica rapa HOM05D009929 ORTHO05D009358 2.0e-07 58.9 42 66.7
Carub.0005s2617 Capsella rubella HOM05D009929 ORTHO05D009358 2.6e-07 58.5 49 59.2
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 2.6e-07 58.5 62 48.4
THA.LOC104800392 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 2.6e-07 58.5 42 66.7
AL5G41340 Arabidopsis lyrata HOM05D009929 ORTHO05D009358 3.4e-07 58.2 42 66.7
CARHR169830 Cardamine hirsuta HOM05D009929 ORTHO05D009358 4.4e-07 57.8 52 55.8
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 5.8e-07 57.4 62 45.2
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 5.8e-07 57.4 62 45.2
AUR62002309 Chenopodium quinoa HOM05D019141 ORTHO05D009358 7.5e-07 57.0 49 55.1
AUR62015381 Chenopodium quinoa HOM05D019141 ORTHO05D009358 7.5e-07 57.0 49 55.1
ATR0824G133 Amborella trichopoda HOM05D008235 ORTHO05D009358 9.8e-07 56.6 57 50.9
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 9.8e-07 56.6 60 50.0
Thhalv10005962m.g Eutrema salsugineum HOM05D009929 ORTHO05D009358 1.7e-06 55.8 42 64.3
THA.LOC104803712 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 1.7e-06 55.8 49 57.1
Sp5g03710 Schrenkiella parvula HOM05D009929 ORTHO05D009358 2.2e-06 55.5 49 55.1
Aa31LG1G25120 Aethionema arabicum HOM05D009929 ORTHO05D006942 3.7e-06 54.7 49 57.1
Gohir.D02G114100 Gossypium hirsutum HOM05D008235 ORTHO05D009358 3.7e-06 54.7 42 64.3
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 3.7e-06 54.7 77 41.6
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 4.9e-06 54.3 42 61.9
Duzib151G0752 Durio zibethinus HOM05D008235 ORTHO05D009358 6.4e-06 53.9 57 49.1
EL10Ac3g05943 Beta vulgaris HOM05D019141 ORTHO05D009358 8.3e-06 53.5 49 51.0


User provided reference genes

Program Settings