Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 1.6e-186 656.0 340 100.0
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 5.2e-113 411.8 342 65.8
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 5.6e-99 365.2 344 59.9
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 5.6e-99 365.2 344 59.9
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 4.5e-96 355.5 333 60.1
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 2.9e-95 352.8 345 56.8
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 4.2e-94 349.0 324 59.9
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 2.1e-93 346.7 336 55.7
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 2.7e-93 346.3 354 57.3
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 4.6e-93 345.5 342 58.5
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 1.3e-92 344.0 330 57.9
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 5.1e-92 342.0 342 57.3
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 6.7e-92 341.7 327 56.6
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 1.1e-91 340.9 338 55.0
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 1.5e-91 340.5 343 57.1
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 1.9e-91 340.1 331 58.9
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 5.6e-91 338.6 332 58.7
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 7.4e-91 338.2 330 58.5
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 9.6e-91 337.8 331 55.6
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 8.1e-90 334.7 333 57.7
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 3.8e-87 325.9 331 54.4
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 6.5e-87 325.1 357 54.1
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 2.5e-86 323.2 346 56.9
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 4.2e-86 322.4 391 51.9
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 7.1e-86 321.6 323 55.4
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 2.1e-85 320.1 323 56.3
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 2.7e-85 319.7 321 55.8
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 3.5e-85 319.3 323 55.1
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 7.9e-85 318.2 323 55.7
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 1.8e-84 317.0 332 53.3
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 3.0e-84 316.2 323 56.0
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 3.0e-84 316.2 323 56.7
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 3.9e-84 315.8 323 56.3
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 5.1e-84 315.5 323 55.4
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 5.1e-84 315.5 323 55.4
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 8.7e-84 314.7 323 54.5
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 8.7e-84 314.7 325 54.2
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 1.5e-83 313.9 323 54.5
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 2.5e-83 313.2 323 55.7
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 3.3e-83 312.8 329 54.1
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 4.3e-83 312.4 323 56.0
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 5.7e-83 312.0 323 54.8
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 4.8e-82 308.9 329 53.5
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 8.2e-82 308.1 340 53.2
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 1.2e-80 304.3 340 52.6
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 1.5e-80 303.9 329 52.9
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 2.0e-80 303.5 323 52.3
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 4.5e-80 302.4 256 64.1
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 5.8e-80 302.0 330 51.5
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 1.0e-79 301.2 340 52.4
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.7e-79 300.4 332 53.3
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 1.7e-79 300.4 342 51.2
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 1.7e-79 300.4 323 52.0
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 3.8e-79 299.3 341 50.1
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 3.8e-79 299.3 337 51.9
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 1.9e-78 297.0 322 53.4
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 4.2e-78 295.8 337 52.8
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 9.3e-78 294.7 329 52.6
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 1.2e-77 294.3 325 52.6
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 1.6e-77 293.9 334 50.3
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 2.1e-77 293.5 313 54.0
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 2.7e-77 293.1 325 52.0
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 7.9e-77 291.6 324 50.3
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 5.1e-76 288.9 339 51.9
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 5.1e-76 288.9 333 51.1
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 8.7e-76 288.1 322 53.7
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 2.5e-75 286.6 334 48.2
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 3.3e-75 286.2 346 48.3
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 3.3e-75 286.2 343 49.0
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 5.7e-75 285.4 323 51.7
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 9.7e-75 284.6 324 48.8
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 2.4e-73 280.0 329 49.2
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 6.9e-73 278.5 331 50.8
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 3.4e-72 276.2 331 49.2
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 3.8e-71 272.7 357 44.5
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 4.2e-70 269.2 327 48.0
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 3.6e-69 266.2 295 50.5
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 7.9e-69 265.0 345 46.1
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 9.7e-67 258.1 433 42.0
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 8.2e-66 255.0 325 44.6
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 6.9e-65 251.9 373 43.4
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 3.4e-64 249.6 330 45.5
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 8.5e-63 245.0 421 39.7
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 1.1e-59 234.6 340 41.5
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 7.4e-59 231.9 304 46.7
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 1.3e-58 231.1 334 43.7
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 1.6e-53 214.2 174 60.9
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 2.7e-53 213.4 336 44.3
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 6.1e-53 212.2 163 64.4
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 4.0e-52 209.5 322 45.0
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 6.7e-52 208.8 160 63.8
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 2.6e-51 206.8 322 44.4
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 3.3e-51 206.5 326 41.7
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 1.2e-48 198.0 289 44.6
CiPaw.01G102600 Carya illinoinensis HOM05D006262 ORTHO05D007266 1.6e-48 197.6 197 58.9
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 2.9e-47 193.4 327 41.0
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 2.9e-47 193.4 327 41.0
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 5.2e-44 182.6 334 35.9
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 4.4e-43 179.5 127 71.7
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 4.2e-38 162.9 322 36.3
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 1.4e-36 157.9 347 34.9
Pp3c9_3680 Physcomitrium patens HOM05D006262 ORTHO05D007266 2.0e-27 127.5 332 30.4
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 1.3e-23 114.8 81 70.4
Nitab4.5_0001049g0100 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.5e-22 111.3 160 44.4
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.2e-21 108.2 140 49.3
Nitab4.5_0002908g0070 Nicotiana tabacum HOM05D006262 ORTHO05D007266 2.1e-21 107.5 163 44.2
Cpa.g.sc71.28 Carica papaya HOM05D006262 ORTHO05D007266 4.7e-21 106.3 138 46.4
Peaxi162Scf00286g10017 Petunia axillaris HOM05D006262 ORTHO05D007266 3.4e-19 100.1 192 37.5
FAN17G0796 Fragaria x ananassa HOM05D006262 ORTHO05D007266 5.8e-19 99.4 82 61.0
QL09p046233 Quercus lobata HOM05D006262 ORTHO05D007266 1.3e-18 98.2 83 65.1
CAN.G688.4 Capsicum annuum HOM05D006262 ORTHO05D007266 3.7e-18 96.7 90 52.2
MCO03G554 Micromonas commoda HOM05D006262 ORTHO05D007266 1.9e-17 94.4 284 29.6
PRCOL_00005486 Prasinoderma coloniale HOM05D006262 ORTHO05D007266 1.3e-15 88.2 219 30.6
CAN.G51.2 Capsicum annuum HOM05D006262 ORTHO05D007266 3.0e-15 87.0 81 53.1
Cre01.g049900 Chlamydomonas reinhardtii HOM05D006262 ORTHO05D007266 3.6e-13 80.1 312 27.6
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 2.4e-09 67.4 68 57.4
FAN07G2249 Fragaria x ananassa HOM05D006262 ORTHO05D007266 7.8e-08 62.4 46 63.0
FvH4_c17g00080 Fragaria vesca HOM05D006262 ORTHO05D007266 1.0e-07 62.0 49 59.2
FAN07G1916 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.3e-07 61.6 52 63.5
GSVIVG01020265001 Vitis vinifera HOM05D006262 ORTHO05D007266 1.3e-07 61.6 63 55.6
Glyma.10G295900 Glycine max HOM05D006262 ORTHO05D007266 4.3e-06 56.6 87 44.8
CAN.G1343.18 Capsicum annuum HOM05D006262 ORTHO05D007266 5.6e-06 56.2 96 38.5


User provided reference genes

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