Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 3.2e-287 991.1 523 100.0
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 1.2e-119 434.5 543 50.8
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 3.4e-119 433.0 543 50.8
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 1.1e-117 427.9 544 50.6
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 3.9e-115 419.5 543 50.3
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 5.0e-115 419.1 540 49.6
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 4.7e-113 412.5 582 47.3
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 1.4e-112 411.0 541 49.2
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 3.1e-112 409.8 565 48.3
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 3.4e-111 406.4 531 50.3
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.9e-110 403.3 543 48.8
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 1.9e-109 400.6 544 47.4
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 7.8e-108 395.2 534 51.3
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 1.7e-107 394.0 546 48.2
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.5e-106 390.2 539 46.6
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 3.3e-106 389.8 588 45.1
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 1.2e-105 387.9 539 46.6
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 3.6e-105 386.3 595 44.2
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.7e-105 386.0 539 46.0
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 8.9e-104 381.7 536 47.8
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 1.5e-103 380.9 589 45.2
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 2.6e-103 380.2 580 46.0
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 3.4e-103 379.8 544 47.6
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.9e-101 374.0 550 45.6
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 3.2e-101 373.2 539 46.9
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 1.6e-100 370.9 543 47.0
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 3.5e-100 369.8 543 47.3
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 6.0e-100 369.0 550 44.5
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 3.0e-99 366.7 589 43.3
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 3.9e-99 366.3 532 45.5
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 1.5e-98 364.4 542 44.6
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.9e-98 364.0 540 46.7
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 4.3e-98 362.8 532 44.4
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 4.7e-97 359.4 549 45.2
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 8.1e-97 358.6 646 41.0
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 9.0e-96 355.1 547 44.2
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 1.5e-95 354.4 539 44.2
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 3.4e-95 353.2 562 44.0
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 7.6e-95 352.1 537 45.6
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 1.3e-94 351.3 539 44.7
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 1.7e-94 350.9 502 46.8
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 4.9e-94 349.4 608 41.9
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 1.1e-93 348.2 547 43.9
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 2.4e-93 347.1 556 44.2
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.4e-93 347.1 478 48.7
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 5.4e-93 345.9 603 41.3
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 3.5e-92 343.2 603 41.8
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 1.7e-91 340.9 533 41.8
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 3.0e-91 340.1 551 42.3
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 3.9e-91 339.7 532 44.2
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 5.1e-91 339.3 547 42.6
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 1.5e-90 337.8 546 43.0
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 4.3e-90 336.3 544 43.0
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 5.6e-90 335.9 546 43.0
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 6.2e-89 332.4 532 42.5
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 6.2e-89 332.4 533 43.5
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 6.2e-89 332.4 543 42.0
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 5.3e-88 329.3 522 44.4
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 1.2e-87 328.2 551 40.7
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.2e-87 328.2 548 42.0
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 4.9e-86 322.8 542 42.3
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 1.2e-84 318.2 578 40.1
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 6.0e-84 315.8 561 41.4
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 6.0e-84 315.8 537 42.3
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 8.7e-83 312.0 610 39.7
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.4e-80 304.7 157 98.7
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 7.6e-79 298.9 557 39.9
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 2.5e-77 293.9 557 40.2
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.9e-74 284.3 370 49.5
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.5e-71 274.6 543 37.4
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 2.6e-71 273.9 554 36.8
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 5.5e-69 266.2 531 37.1
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.0e-67 261.9 472 41.7
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.3e-67 261.5 508 37.8
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.3e-65 255.0 468 42.5
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 6.9e-64 249.2 451 41.2
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 1.3e-62 245.0 541 37.2
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 2.9e-62 243.8 551 35.2
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 8.5e-62 242.3 454 40.1
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 1.3e-57 228.4 464 39.9
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 1.1e-53 215.3 548 33.6
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 1.8e-48 198.0 476 33.6
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 7.2e-37 159.5 399 32.1
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 1.2e-34 152.1 413 36.8
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 1.7e-33 148.3 431 29.5
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 4.5e-31 140.2 128 53.9
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 2.5e-29 134.4 532 27.3
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 6.1e-28 129.8 373 33.5
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 5.7e-26 123.2 549 26.8
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 8.3e-25 119.4 214 39.7
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 4.1e-24 117.1 165 46.1
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 2.7e-23 114.4 173 43.4
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 2.7e-23 114.4 173 43.4
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 5.0e-22 110.2 430 28.8
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 2.8e-20 104.4 340 29.1
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 3.4e-18 97.4 78 61.5
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 2.7e-15 87.8 168 36.9
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.1e-08 65.9 56 60.7


User provided reference genes

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