Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00228 Eucalyptus grandis HOM05D001360 ORTHO05D001231 2.6e-89 332.0 166 100.0
Eucgr.A00225 Eucalyptus grandis HOM05D001360 ORTHO05D001231 7.1e-55 217.6 157 74.5
Eucgr.L00549 Eucalyptus grandis HOM05D001360 ORTHO05D001231 1.8e-50 203.0 146 74.0
Eucgr.A00223 Eucalyptus grandis HOM05D001360 ORTHO05D001231 3.9e-45 185.3 146 70.5
Eucgr.L00547 Eucalyptus grandis HOM05D001360 ORTHO05D001231 4.8e-43 178.3 146 67.1
Eucgr.L01676 Eucalyptus grandis HOM05D001360 ORTHO05D001231 1.1e-39 167.2 141 66.7
Eucgr.A00231 Eucalyptus grandis HOM05D001360 ORTHO05D001231 6.7e-37 157.9 138 65.2
Eucgr.A00234 Eucalyptus grandis HOM05D001360 ORTHO05D001231 1.9e-36 156.4 136 63.2
Eucgr.A00226 Eucalyptus grandis HOM05D001360 ORTHO05D001231 6.9e-34 147.9 138 61.6
Eucgr.A00236 Eucalyptus grandis HOM05D001360 ORTHO05D001231 2.6e-33 146.0 143 60.1
Potri.014G176300 Populus trichocarpa HOM05D001360 ORTHO05D001231 3.8e-16 89.0 121 48.8
PGR042G2230 Punica granatum HOM05D001360 ORTHO05D001231 6.5e-16 88.2 125 43.2
Manes.12G060112 Manihot esculenta HOM05D001360 ORTHO05D001231 9.4e-15 84.3 117 44.4
Cpa.g.sc8.51 Carica papaya HOM05D001360 ORTHO05D000611 1.2e-14 84.0 116 44.8
PGR083G2480 Punica granatum HOM05D001360 ORTHO05D001231 1.2e-14 84.0 126 42.1
Gorai.001G227700 Gossypium raimondii HOM05D001360 ORTHO05D001231 1.4e-13 80.5 118 42.4
Duzib138G1870 Durio zibethinus HOM05D001360 ORTHO05D001231 1.8e-13 80.1 118 43.2
Gohir.A07G195900 Gossypium hirsutum HOM05D001360 ORTHO05D001231 3.9e-13 79.0 118 42.4
Thecc.01G208900 Theobroma cacao HOM05D001360 ORTHO05D001231 4.3e-12 75.5 118 42.4
COL.COLO4_07044 Corchorus olitorius HOM05D001360 ORTHO05D001231 5.7e-12 75.1 118 41.5
Eucgr.L01675 Eucalyptus grandis HOM05D001360 ORTHO05D001231 7.4e-12 74.7 136 35.3
Eucgr.A00235 Eucalyptus grandis HOM05D001360 ORTHO05D001231 1.3e-11 73.9 128 34.4
Cfa010667 Carpinus fangiana HOM05D001360 ORTHO05D001231 6.3e-11 71.6 121 38.0
TWI75G1230 Tripterygium wilfordii HOM05D001360 ORTHO05D001231 6.3e-11 71.6 118 37.3
Eucgr.L00548 Eucalyptus grandis HOM05D001360 ORTHO05D001231 3.1e-10 69.3 108 43.5
Sabra14G0135000 Salix brachista HOM05D001360 ORTHO05D001231 3.1e-10 69.3 113 42.5
Eucgr.L00550 Eucalyptus grandis HOM05D001360 ORTHO05D001231 4.1e-10 68.9 108 42.6
Eucgr.A00224 Eucalyptus grandis HOM05D001360 ORTHO05D001231 6.9e-10 68.2 107 41.1
Cpa.g.sc8.52 Carica papaya HOM05D001360 ORTHO05D001231 1.2e-09 67.4 120 37.5
DCAR_015817 Daucus carota HOM05D001360 ORTHO05D001231 1.3e-08 63.9 127 37.0
Potri.014G176400 Populus trichocarpa HOM05D001360 ORTHO05D001231 1.7e-08 63.5 113 41.6
DCAR_011875 Daucus carota HOM05D001360 ORTHO05D001231 2.2e-08 63.2 121 41.3
GSVIVG01029594001 Vitis vinifera HOM05D001360 ORTHO05D001231 2.9e-08 62.8 109 37.6
Manes.12G060101 Manihot esculenta HOM05D001360 ORTHO05D001231 6.5e-08 61.6 110 42.7
MSTRG.12746 Avicennia marina HOM05D001360 ORTHO05D001231 1.1e-07 60.8 116 37.1
DCAR_015808 Daucus carota HOM05D001360 ORTHO05D001231 1.1e-07 60.8 144 31.2
DCAR_015818 Daucus carota HOM05D001360 ORTHO05D001231 1.1e-07 60.8 124 35.5
BcaC05g29541 Brassica carinata HOM05D001360 ORTHO05D001231 1.9e-07 60.1 118 37.3
CSS0034994 Camellia sinensis var. sinensis HOM05D001360 ORTHO05D001231 1.9e-07 60.1 128 34.4
Carub.0003s0705 Capsella rubella HOM05D001360 ORTHO05D001231 1.9e-07 60.1 116 37.9
DCAR_011874 Daucus carota HOM05D001360 ORTHO05D001231 1.9e-07 60.1 121 40.5
Manes.12G059900 Manihot esculenta HOM05D001360 ORTHO05D001231 1.9e-07 60.1 110 42.7
Manes.12G060200 Manihot esculenta HOM05D001360 ORTHO05D001231 1.9e-07 60.1 110 42.7
PGR044G1340 Punica granatum HOM05D001360 ORTHO05D001231 2.5e-07 59.7 117 32.5
Sabra14G0134900 Salix brachista HOM05D001360 ORTHO05D001231 3.2e-07 59.3 116 36.2
GSVIVG01009799001 Vitis vinifera HOM05D001360 ORTHO05D001231 3.2e-07 59.3 111 37.8
BcaC05g29543 Brassica carinata HOM05D001360 ORTHO05D001231 4.2e-07 58.9 116 37.1
A03p35290 Brassica napus HOM05D001360 ORTHO05D001231 4.2e-07 58.9 116 37.1
C03p42910 Brassica napus HOM05D001360 ORTHO05D001231 4.2e-07 58.9 116 37.1
C05p59810 Brassica napus HOM05D001360 ORTHO05D001231 4.2e-07 58.9 116 37.1
BolC5t34635H Brassica oleracea HOM05D001360 ORTHO05D001231 4.2e-07 58.9 116 37.1
BraA03t12707Z Brassica rapa HOM05D001360 ORTHO05D001231 4.2e-07 58.9 116 37.1
CARHR082160 Cardamine hirsuta HOM05D001360 ORTHO05D001231 4.2e-07 58.9 116 37.9
DCAR_012463 Daucus carota HOM05D001360 ORTHO05D001231 4.2e-07 58.9 118 35.6
DCAR_029880 Daucus carota HOM05D001360 ORTHO05D001231 4.2e-07 58.9 128 32.8
Sp3g06420 Schrenkiella parvula HOM05D001360 ORTHO05D001231 4.2e-07 58.9 116 37.1
BcaB03g14697 Brassica carinata HOM05D001360 ORTHO05D001231 5.5e-07 58.5 116 36.2
BcaC01g04279 Brassica carinata HOM05D001360 ORTHO05D001231 5.5e-07 58.5 116 37.1
BolC3t16559H Brassica oleracea HOM05D001360 ORTHO05D001231 5.5e-07 58.5 116 37.1
Eucgr.J01057 Eucalyptus grandis HOM05D001360 ORTHO05D001231 5.5e-07 58.5 120 32.5
Thhalv10021445m.g Eutrema salsugineum HOM05D001360 ORTHO05D001231 5.5e-07 58.5 116 37.1
Ciclev10016616m.g Citrus clementina HOM05D001360 ORTHO05D001231 7.2e-07 58.2 119 38.7
A05p40700 Brassica napus HOM05D001360 ORTHO05D001231 9.4e-07 57.8 116 37.1
BraA05t22801Z Brassica rapa HOM05D001360 ORTHO05D001231 9.4e-07 57.8 116 37.1
ClCG09G007830 Citrullus lanatus HOM05D001360 ORTHO05D001231 9.4e-07 57.8 118 36.4
MELO3C015727.2 Cucumis melo HOM05D001360 ORTHO05D001231 9.4e-07 57.8 118 36.4
Lsat_1_v5_gn_5_176620 Lactuca sativa HOM05D001360 ORTHO05D001231 9.4e-07 57.8 117 35.0
Lsat_1_v5_gn_9_16561 Lactuca sativa HOM05D001360 ORTHO05D001231 9.4e-07 57.8 117 35.0
MD05G1156100 Malus domestica HOM05D001360 ORTHO05D001231 9.4e-07 57.8 111 37.8
Rhsim13G0054600 Rhododendron simsii HOM05D001360 ORTHO05D001231 9.4e-07 57.8 118 34.7
Ciclev10018250m.g Citrus clementina HOM05D001360 ORTHO05D001231 1.2e-06 57.4 132 34.8
Migut.N00677 Erythranthe guttata HOM05D001360 ORTHO05D001231 1.2e-06 57.4 111 37.8
Aa31LG5G23600 Aethionema arabicum HOM05D001360 ORTHO05D001231 1.6e-06 57.0 116 35.3
AL3G18830 Arabidopsis lyrata HOM05D001360 ORTHO05D001231 1.6e-06 57.0 116 37.1
AT3G07510 Arabidopsis thaliana HOM05D001360 ORTHO05D001231 1.6e-06 57.0 116 37.1
DCAR_011869 Daucus carota HOM05D001360 ORTHO05D000041 1.6e-06 57.0 119 37.8
ECA248G1556 Erigeron canadensis HOM05D001360 ORTHO05D001231 1.6e-06 57.0 116 33.6
Potri.014G176000 Populus trichocarpa HOM05D001360 ORTHO05D001231 1.6e-06 57.0 117 35.9
SalBow1G0984 Salvia bowleyana HOM05D001360 ORTHO05D001231 1.6e-06 57.0 111 37.8
SGA_v2.0_scaffold77G25308 Striga asiatica HOM05D001360 ORTHO05D001231 1.6e-06 57.0 116 35.3
DCAR_012461 Daucus carota HOM05D001360 ORTHO05D001231 2.1e-06 56.6 123 34.1
Eucgr.J01060 Eucalyptus grandis HOM05D001360 ORTHO05D001231 2.1e-06 56.6 123 30.1
HanXRQChr08g0231831 Helianthus annuus HOM05D001360 ORTHO05D001231 2.1e-06 56.6 112 36.6
Rhsim13G0054500 Rhododendron simsii HOM05D001360 ORTHO05D001231 2.1e-06 56.6 110 37.3
Atru.chr3.4031 Acer truncatum HOM05D001360 ORTHO05D001231 2.7e-06 56.2 130 35.4
Lj2P1114T30 Lonicera japonica HOM05D001360 ORTHO05D001231 2.7e-06 56.2 125 36.8
Prupe.8G188200 Prunus persica HOM05D001360 ORTHO05D001231 2.7e-06 56.2 113 37.2
TAR633G1941 Trochodendron aralioides HOM05D001360 ORTHO05D001231 2.7e-06 56.2 118 36.4
EL10Ac5g10593 Beta vulgaris HOM05D001360 ORTHO05D001231 3.6e-06 55.8 116 34.5
Cc01_g15940 Coffea canephora HOM05D001360 ORTHO05D001231 3.6e-06 55.8 117 35.0
Thhalv10005283m.g Eutrema salsugineum HOM05D001360 ORTHO05D001231 3.6e-06 55.8 116 38.8
Lj1C103G10 Lonicera japonica HOM05D001360 ORTHO05D001231 3.6e-06 55.8 119 33.6
MD10G1149800 Malus domestica HOM05D001360 ORTHO05D001231 3.6e-06 55.8 117 34.2
Manes.12G060113 Manihot esculenta HOM05D001360 ORTHO05D001231 3.6e-06 55.8 117 35.0
SalBow3G1192 Salvia bowleyana HOM05D001360 ORTHO05D001231 3.6e-06 55.8 111 36.9
Sed0025553 Sechium edule HOM05D001360 ORTHO05D001231 3.6e-06 55.8 118 35.6
CiPaw.13G057500 Carya illinoinensis HOM05D001360 ORTHO05D001231 4.7e-06 55.5 113 36.3
MD05G1155400 Malus domestica HOM05D001360 ORTHO05D001231 4.7e-06 55.5 121 35.5
MD05G1155900 Malus domestica HOM05D001360 ORTHO05D001231 4.7e-06 55.5 118 37.3
Sabra02G0182400 Salix brachista HOM05D000001 ORTHO05D000003 4.7e-06 55.5 119 35.3
TWI31G0671 Tripterygium wilfordii HOM05D001360 ORTHO05D001231 4.7e-06 55.5 107 36.4
Aa31LG4G15820 Aethionema arabicum HOM05D001360 ORTHO05D001231 6.1e-06 55.1 123 37.4
Aa31LG4G9720 Aethionema arabicum HOM05D001360 ORTHO05D001231 6.1e-06 55.1 116 35.3
DCAR_011876 Daucus carota HOM05D001360 ORTHO05D001231 6.1e-06 55.1 128 33.6
Lj1g0010077 Lotus japonicus HOM05D001360 ORTHO05D001231 6.1e-06 55.1 113 36.3
Oeu003669.1 Olea europaea HOM05D001360 ORTHO05D001231 6.1e-06 55.1 114 36.0
THA.LOC104822465 Tarenaya hassleriana HOM05D001360 ORTHO05D001231 6.1e-06 55.1 113 38.9
Aa31LG2G8320 Aethionema arabicum HOM05D001360 ORTHO05D001231 7.9e-06 54.7 131 32.1
Cfa010669 Carpinus fangiana HOM05D001360 ORTHO05D001231 7.9e-06 54.7 118 37.3
AUR62008073 Chenopodium quinoa HOM05D001360 ORTHO05D001231 7.9e-06 54.7 116 32.8
DCAR_018615 Daucus carota HOM05D001360 ORTHO05D001231 7.9e-06 54.7 113 35.4
Eucgr.J01058 Eucalyptus grandis HOM05D001360 ORTHO05D001231 7.9e-06 54.7 125 29.6
Potri.002G239500 Populus trichocarpa HOM05D001360 ORTHO05D001231 7.9e-06 54.7 117 35.0
Sp2g13020 Schrenkiella parvula HOM05D001360 ORTHO05D001231 7.9e-06 54.7 141 33.3
Sopen06g034350 Solanum pennellii HOM05D001360 ORTHO05D001231 7.9e-06 54.7 118 32.2


User provided reference genes

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