Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 3.3e-192 674.9 336 100.0
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 4.3e-144 515.0 325 76.3
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 2.8e-143 512.3 330 75.8
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 6.3e-143 511.1 330 76.1
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 4.1e-142 508.4 323 75.5
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 5.3e-142 508.1 325 73.8
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 1.7e-140 503.1 329 75.1
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 1.2e-138 496.9 332 72.0
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.6e-138 496.5 332 71.7
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 4.7e-138 495.0 332 72.6
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 6.1e-138 494.6 332 71.4
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 6.1e-138 494.6 326 73.6
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 2.3e-137 492.7 332 71.4
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 3.9e-137 491.9 332 71.1
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 8.8e-137 490.7 332 72.3
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 1.5e-136 490.0 332 71.7
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 5.7e-136 488.0 332 71.4
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 5.7e-136 488.0 332 71.4
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 7.4e-136 487.6 332 71.4
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 1.7e-135 486.5 327 72.2
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 2.2e-135 486.1 332 71.1
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 6.3e-135 484.6 332 70.2
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 8.2e-135 484.2 332 70.2
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 1.1e-134 483.8 327 71.9
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 1.4e-134 483.4 332 70.5
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 1.8e-134 483.0 332 70.8
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 2.4e-134 482.6 329 71.4
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 4.1e-134 481.9 324 70.1
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 7.0e-134 481.1 363 66.1
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 3.5e-133 478.8 332 69.6
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 4.5e-133 478.4 332 69.0
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 1.3e-132 476.9 332 70.5
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 1.7e-132 476.5 364 65.7
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.2e-132 476.1 333 70.6
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 1.1e-131 473.8 323 70.3
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 3.2e-131 472.2 333 70.0
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 4.2e-131 471.9 329 67.8
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 5.5e-131 471.5 323 67.8
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 9.4e-131 470.7 326 67.5
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 9.4e-131 470.7 333 69.7
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 1.2e-130 470.3 329 67.5
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.4e-129 466.8 330 67.9
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 2.3e-129 466.1 348 66.4
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 5.2e-129 464.9 298 73.8
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 5.2e-129 464.9 319 68.3
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 6.7e-129 464.5 323 67.8
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 8.8e-129 464.2 330 67.6
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.1e-128 463.8 330 67.0
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 2.0e-128 463.0 329 65.7
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.0e-128 463.0 323 66.3
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 2.0e-128 463.0 323 67.5
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 2.6e-128 462.6 330 67.3
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 2.6e-128 462.6 330 67.6
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 3.3e-128 462.2 325 70.2
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 6.3e-127 458.0 321 67.0
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 8.2e-127 457.6 330 67.3
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 7.0e-126 454.5 323 65.9
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 9.1e-126 454.1 323 65.3
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 1.6e-125 453.4 326 66.0
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 2.0e-125 453.0 319 67.1
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 1.3e-124 450.3 325 67.1
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 1.7e-124 449.9 331 66.5
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 5.0e-124 448.4 319 66.8
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 8.5e-124 447.6 325 67.4
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 1.5e-123 446.8 332 69.0
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 1.9e-123 446.4 325 66.2
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 3.2e-123 445.7 328 64.0
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 1.6e-122 443.4 319 65.8
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 3.6e-122 442.2 319 64.9
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 3.6e-122 442.2 325 65.2
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.0e-121 440.7 382 59.4
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 1.4e-121 440.3 329 65.0
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 1.2e-120 437.2 292 71.9
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 1.2e-120 437.2 323 66.9
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 2.0e-120 436.4 325 66.2
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 9.7e-120 434.1 346 64.7
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.7e-119 433.3 346 64.5
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 3.7e-119 432.2 316 67.7
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 4.8e-119 431.8 376 56.6
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 5.3e-118 428.3 354 63.0
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 3.5e-117 425.6 325 64.9
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 1.7e-116 423.3 360 57.2
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 6.5e-116 421.4 323 65.0
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 3.2e-115 419.1 329 63.2
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 2.7e-114 416.0 321 63.2
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 1.2e-112 410.6 329 62.6
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 1.3e-111 407.1 329 60.5
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 1.3e-111 407.1 333 59.5
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 1.7e-108 396.7 323 62.5
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 3.3e-107 392.5 295 65.4
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 8.0e-106 387.9 326 57.1
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 3.7e-103 379.0 334 59.0
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 2.0e-101 373.2 276 65.2
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 1.3e-100 370.5 251 67.7
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 1.9e-99 366.7 329 55.3
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 5.6e-99 365.2 329 57.8
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 1.2e-98 364.0 327 56.6
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 1.5e-96 357.1 235 72.3
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 4.4e-96 355.5 263 66.2
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 3.7e-95 352.4 255 67.5
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 1.1e-94 350.9 244 70.1
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 1.7e-92 343.6 294 56.8
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 2.3e-89 333.2 332 52.7
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 8.3e-87 324.7 334 50.0
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 8.3e-87 324.7 193 78.2
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 2.0e-80 303.5 235 63.8
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 2.6e-80 303.1 230 64.3
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 8.3e-79 298.1 189 72.0
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 1.1e-75 287.7 336 44.6
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 9.5e-75 284.6 341 44.3
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 1.8e-73 280.4 333 44.1
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 3.1e-73 279.6 330 43.6
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 2.4e-65 253.4 161 69.6
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 8.7e-60 235.0 326 43.6
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.4e-57 226.9 170 67.1
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 8.4e-55 218.4 170 64.1
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 2.1e-53 213.8 122 74.6
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 2.1e-50 203.8 169 62.1
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 5.7e-43 179.1 361 33.2
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 1.1e-41 174.9 200 52.0
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 5.8e-40 169.1 345 33.0
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 1.8e-36 157.5 140 53.6
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 5.1e-36 156.0 351 31.1
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 8.7e-36 155.2 315 33.7
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 2.0e-32 144.1 144 53.5
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 5.1e-28 129.4 357 29.4
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 1.5e-27 127.9 109 59.6
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 4.8e-18 96.3 78 64.1
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 5.3e-17 92.8 60 73.3
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 2.0e-16 90.9 245 27.3
Os05g0295700 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 5.0e-15 86.3 67 52.2
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 3.6e-13 80.1 65 63.1
SHI32711 Sapria himalayana HOM05D005903 ORTHO05D007293 4.8e-10 69.7 60 50.0
SHI32710 Sapria himalayana HOM05D005903 ORTHO05D007293 7.0e-09 65.9 84 47.6
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 9.1e-09 65.5 66 47.0
Cfa001138 Carpinus fangiana HOM05D000398 ORTHO05D000551 2.0e-08 64.3 57 54.4


User provided reference genes

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