Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00136 Eucalyptus grandis HOM05D015233 ORTHO05D000186 1.8e-96 355.9 176 100.0
Eucgr.A01299 Eucalyptus grandis HOM05D015233 ORTHO05D000186 1.8e-96 355.9 176 100.0
Eucgr.A00131 Eucalyptus grandis HOM05D015233 ORTHO05D000186 4.2e-74 281.6 165 86.1
Eucgr.A00138 Eucalyptus grandis HOM05D015233 ORTHO05D000186 1.8e-72 276.2 166 86.1
Eucgr.A00129 Eucalyptus grandis HOM05D015233 ORTHO05D000186 1.3e-67 260.0 151 86.8
Eucgr.A00137 Eucalyptus grandis HOM05D015233 ORTHO05D000186 3.6e-65 251.9 166 78.9
Eucgr.A00132 Eucalyptus grandis HOM05D000322 ORTHO05D000186 4.3e-58 228.4 147 79.6
Eucgr.A00124 Eucalyptus grandis HOM05D000322 ORTHO05D000186 9.5e-58 227.3 147 78.9
Eucgr.A00140 Eucalyptus grandis HOM05D015233 ORTHO05D000186 9.5e-58 227.3 147 78.9
Eucgr.A00130 Eucalyptus grandis HOM05D015233 ORTHO05D000186 3.4e-47 192.2 151 68.2
Eucgr.A01300 Eucalyptus grandis HOM05D015233 ORTHO05D000186 5.4e-45 184.9 140 67.1
Eucgr.A00162 Eucalyptus grandis HOM05D000322 ORTHO05D000186 1.5e-18 97.1 161 39.1
Eucgr.A00173 Eucalyptus grandis HOM05D000322 ORTHO05D000186 7.3e-18 94.7 146 40.4
Eucgr.A00159 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.6e-17 92.4 150 39.3
Eucgr.A00188 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.4e-16 89.7 150 38.0
Eucgr.A00172 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.1e-16 89.4 150 39.3
Eucgr.A00128 Eucalyptus grandis HOM05D000322 ORTHO05D000186 1.5e-15 87.0 150 37.3
Eucgr.A01303 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.6e-15 86.3 139 39.6
Eucgr.A01304 Eucalyptus grandis HOM05D000322 ORTHO05D000186 4.5e-15 85.5 134 38.1
Eucgr.A00135 Eucalyptus grandis HOM05D000322 ORTHO05D000186 9.9e-15 84.3 140 35.0
Hma1.2p1_0078F.1_g040210 Hydrangea macrophylla HOM05D000322 ORTHO05D000186 9.9e-15 84.3 140 37.1
Dinv29699 Davidia involucrata HOM05D000322 ORTHO05D000186 1.3e-14 84.0 150 36.0
Eucgr.A00142 Eucalyptus grandis HOM05D000322 ORTHO05D000186 1.3e-14 84.0 153 37.9
PGR031G1022 Punica granatum HOM05D000322 ORTHO05D000186 1.3e-14 84.0 150 36.7
Dinv29696 Davidia involucrata HOM05D000322 ORTHO05D000186 4.9e-14 82.0 150 34.0
Duzib052G0343 Durio zibethinus HOM05D000322 ORTHO05D000186 4.9e-14 82.0 150 32.7
Hma1.2p1_0013F.1_g009070 Hydrangea macrophylla HOM05D000322 ORTHO05D000186 8.4e-14 81.3 150 33.3
Duzib212G0186 Durio zibethinus HOM05D000322 ORTHO05D000186 1.1e-13 80.9 150 32.0
Dinv29702 Davidia involucrata HOM05D000322 ORTHO05D000186 1.4e-13 80.5 149 36.2
Thecc.04G292200 Theobroma cacao HOM05D000322 ORTHO05D000186 2.4e-13 79.7 150 32.7
Duzib212G0313 Durio zibethinus HOM05D000322 ORTHO05D000186 3.2e-13 79.3 149 32.2
Duzib212G0623 Durio zibethinus HOM05D000322 ORTHO05D000186 3.2e-13 79.3 149 32.2
Duzib212G0935 Durio zibethinus HOM05D000322 ORTHO05D000186 4.2e-13 79.0 149 32.2
Eucgr.A00178 Eucalyptus grandis HOM05D000322 ORTHO05D000186 4.2e-13 79.0 150 36.7
Rhsim04G0230800 Rhododendron simsii HOM05D000322 ORTHO05D000186 4.2e-13 79.0 153 34.6
Thecc.04G292500 Theobroma cacao HOM05D000322 ORTHO05D000186 7.1e-13 78.2 150 32.7
Thecc.04G293000 Theobroma cacao HOM05D000322 ORTHO05D000186 7.1e-13 78.2 149 32.2
vmacro08086 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 7.1e-13 78.2 153 35.9
Rhsim04G0241800 Rhododendron simsii HOM05D000322 ORTHO05D000186 9.3e-13 77.8 150 34.7
Thecc.04G293200 Theobroma cacao HOM05D000322 ORTHO05D000186 9.3e-13 77.8 149 32.2
Rhsim04G0231300 Rhododendron simsii HOM05D000322 ORTHO05D000186 1.2e-12 77.4 156 35.9
Thecc.04G293400 Theobroma cacao HOM05D000322 ORTHO05D000186 1.2e-12 77.4 150 32.7
Dinv39641 Davidia involucrata HOM05D000322 ORTHO05D000186 1.6e-12 77.0 150 34.0
Thecc.04G292900 Theobroma cacao HOM05D000322 ORTHO05D000186 1.6e-12 77.0 150 32.0
COL.COLO4_03600 Corchorus olitorius HOM05D000322 ORTHO05D000186 2.1e-12 76.6 150 32.7
Dinv39643 Davidia involucrata HOM05D000322 ORTHO05D000186 2.1e-12 76.6 150 32.7
vmacro07956 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 2.1e-12 76.6 153 33.3
COL.COLO4_13812 Corchorus olitorius HOM05D000322 ORTHO05D000186 2.7e-12 76.3 150 32.7
COL.COLO4_28720 Corchorus olitorius HOM05D000322 ORTHO05D000186 2.7e-12 76.3 145 33.8
Lj6C683T15 Lonicera japonica HOM05D000322 ORTHO05D000186 2.7e-12 76.3 145 34.5
Rhsim04G0231000 Rhododendron simsii HOM05D000322 ORTHO05D000186 2.7e-12 76.3 150 34.0
vmacro08087 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 2.7e-12 76.3 150 35.3
Eucgr.A00155 Eucalyptus grandis HOM05D000322 ORTHO05D000186 3.5e-12 75.9 153 34.6
Rhsim04G0231400 Rhododendron simsii HOM05D000322 ORTHO05D000186 3.5e-12 75.9 151 34.4
COL.COLO4_03601 Corchorus olitorius HOM05D000322 ORTHO05D000186 6.0e-12 75.1 145 33.1
vmacro07955 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 6.0e-12 75.1 151 33.8
vmacro08083 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 6.0e-12 75.1 153 35.3
Lj6A683G55 Lonicera japonica HOM05D000322 ORTHO05D000186 7.9e-12 74.7 153 34.0
Dinv44327 Davidia involucrata HOM05D000322 ORTHO05D000186 1.0e-11 74.3 150 32.0
Cc03_g10080 Coffea canephora HOM05D000322 ORTHO05D000186 1.3e-11 73.9 152 32.2
vmacro08084 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 1.3e-11 73.9 153 33.3
Actinidia40340 Actinidia chinensis HOM05D000322 ORTHO05D000186 2.3e-11 73.2 150 35.3
MSTRG.9858 Avicennia marina HOM05D000322 ORTHO05D000186 2.3e-11 73.2 156 35.3
Dinv44329 Davidia involucrata HOM05D000322 ORTHO05D000186 2.3e-11 73.2 150 32.0
Lj6A683T52 Lonicera japonica HOM05D000322 ORTHO05D000186 2.3e-11 73.2 153 33.3
Rhsim04G0229900 Rhododendron simsii HOM05D000322 ORTHO05D000186 2.3e-11 73.2 153 33.3
Rhsim04G0230200 Rhododendron simsii HOM05D000322 ORTHO05D000186 3.0e-11 72.8 153 32.7
vmacro07953 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 5.1e-11 72.0 150 32.0
Rhsim04G0230700 Rhododendron simsii HOM05D000322 ORTHO05D000186 6.7e-11 71.6 153 32.7
vmacro07958 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 8.7e-11 71.2 150 32.0
Rhsim04G0231200 Rhododendron simsii HOM05D000322 ORTHO05D000186 1.5e-10 70.5 143 34.3
MSTRG.10124 Avicennia marina HOM05D000322 ORTHO05D000186 2.5e-10 69.7 156 30.8
Hma1.2p1_0078F.1_g040230 Hydrangea macrophylla HOM05D000322 ORTHO05D000186 2.5e-10 69.7 150 31.3
Rhsim04G0230400 Rhododendron simsii HOM05D000322 ORTHO05D000186 3.3e-10 69.3 153 32.0
GSVIVG01035072001 Vitis vinifera HOM05D000322 ORTHO05D000186 3.3e-10 69.3 153 33.3
Eucgr.A00143 Eucalyptus grandis HOM05D000322 ORTHO05D000186 4.3e-10 68.9 150 33.3
Gohir.D02G056600 Gossypium hirsutum HOM05D000322 ORTHO05D000186 4.3e-10 68.9 149 30.9
Eucgr.A00168 Eucalyptus grandis HOM05D000322 ORTHO05D000186 5.6e-10 68.6 150 32.7
SalBow2G1859 Salvia bowleyana HOM05D000322 ORTHO05D000186 5.6e-10 68.6 153 30.1
COL.COLO4_03599 Corchorus olitorius HOM05D000322 ORTHO05D000186 7.4e-10 68.2 149 28.9
COL.COLO4_13811 Corchorus olitorius HOM05D000322 ORTHO05D000186 7.4e-10 68.2 149 28.9
COL.COLO4_34688 Corchorus olitorius HOM05D000322 ORTHO05D000186 7.4e-10 68.2 149 28.9
Rhsim04G0230900 Rhododendron simsii HOM05D000322 ORTHO05D000186 7.4e-10 68.2 96 39.6
Thecc.04G292800 Theobroma cacao HOM05D000322 ORTHO05D000186 7.4e-10 68.2 150 32.0
SalBow2G0226 Salvia bowleyana HOM05D000322 ORTHO05D000186 9.6e-10 67.8 156 30.8
Thecc.04G291900 Theobroma cacao HOM05D000322 ORTHO05D000186 9.6e-10 67.8 149 28.9
Gorai.005G063400 Gossypium raimondii HOM05D000322 ORTHO05D000186 1.3e-09 67.4 149 29.5
Gorai.005G064700 Gossypium raimondii HOM05D000322 ORTHO05D000186 1.3e-09 67.4 149 29.5
Lj6A650T53 Lonicera japonica HOM05D000322 ORTHO05D000186 1.3e-09 67.4 139 30.2
QL06p011020 Quercus lobata HOM05D000322 ORTHO05D000186 1.3e-09 67.4 152 34.2
Haze_01110 Corylus avellana HOM05D000322 ORTHO05D000186 2.1e-09 66.6 148 29.1
Haze_01112 Corylus avellana HOM05D000322 ORTHO05D000186 2.1e-09 66.6 148 29.1
Dinv29701 Davidia involucrata HOM05D000322 ORTHO05D000186 2.1e-09 66.6 93 38.7
Eucgr.A00126 Eucalyptus grandis HOM05D000322 ORTHO05D000186 2.1e-09 66.6 153 33.3
Gorai.005G062500 Gossypium raimondii HOM05D000322 ORTHO05D000186 2.1e-09 66.6 149 29.5
Oeu016263.1 Olea europaea HOM05D000322 ORTHO05D000186 2.1e-09 66.6 154 32.5
QL06p011001 Quercus lobata HOM05D000322 ORTHO05D000186 2.1e-09 66.6 150 30.0
Duzib151G0708 Durio zibethinus HOM05D000322 ORTHO05D000186 2.8e-09 66.2 149 28.9
Duzib151G0924 Durio zibethinus HOM05D000322 ORTHO05D000186 2.8e-09 66.2 155 29.0
Thecc.04G292100 Theobroma cacao HOM05D000322 ORTHO05D000186 2.8e-09 66.2 149 28.2
Duzib151G0027 Durio zibethinus HOM05D000322 ORTHO05D000186 3.7e-09 65.9 149 28.9
Migut.G00558 Erythranthe guttata HOM05D000322 ORTHO05D000186 3.7e-09 65.9 154 29.2
Migut.G00578 Erythranthe guttata HOM05D000322 ORTHO05D000186 3.7e-09 65.9 154 29.9
Gohir.A02G051700 Gossypium hirsutum HOM05D000322 ORTHO05D000186 3.7e-09 65.9 149 29.5
COL.COLO4_34685 Corchorus olitorius HOM05D000322 ORTHO05D000186 4.8e-09 65.5 145 31.7
Gohir.D02G057400 Gossypium hirsutum HOM05D000322 ORTHO05D000186 4.8e-09 65.5 149 29.5
Duzib151G0201 Durio zibethinus HOM05D000322 ORTHO05D000186 6.2e-09 65.1 153 28.1
Duzib151G0603 Durio zibethinus HOM05D000322 ORTHO05D000186 6.2e-09 65.1 149 28.9
Migut.G00579 Erythranthe guttata HOM05D000322 ORTHO05D000186 6.2e-09 65.1 154 29.2
PGR004G2618 Punica granatum HOM05D000322 ORTHO05D000186 6.2e-09 65.1 153 28.8
Migut.G00557 Erythranthe guttata HOM05D000322 ORTHO05D000186 8.1e-09 64.7 154 28.6
Rhsim04G0231100 Rhododendron simsii HOM05D000322 ORTHO05D000186 8.1e-09 64.7 150 30.0
PGR004G2316 Punica granatum HOM05D000322 ORTHO05D000186 1.1e-08 64.3 153 26.8
Rhsim04G0230100 Rhododendron simsii HOM05D000322 ORTHO05D000186 1.1e-08 64.3 153 30.1
MSTRG.4174 Avicennia marina HOM05D000322 ORTHO05D000186 1.4e-08 63.9 156 28.8
Duzib212G0387 Durio zibethinus HOM05D000322 ORTHO05D000186 1.4e-08 63.9 149 28.2
Thecc.04G292400 Theobroma cacao HOM05D000322 ORTHO05D000186 1.4e-08 63.9 102 33.3
MSTRG.9855 Avicennia marina HOM05D000322 ORTHO05D000186 1.8e-08 63.5 156 30.8
Duzib151G0268 Durio zibethinus HOM05D000322 ORTHO05D000186 1.8e-08 63.5 149 28.2
Lj3A826T82 Lonicera japonica HOM05D000322 ORTHO05D000186 1.8e-08 63.5 150 29.3
COL.COLO4_34686 Corchorus olitorius HOM05D000322 ORTHO05D000186 2.4e-08 63.2 147 31.3
Duzib151G0374 Durio zibethinus HOM05D000322 ORTHO05D000186 2.4e-08 63.2 149 27.5
Duzib151G0600 Durio zibethinus HOM05D000322 ORTHO05D000186 2.4e-08 63.2 149 27.5
Thecc.02G223000 Theobroma cacao HOM05D000322 ORTHO05D000186 2.4e-08 63.2 149 28.2
Thecc.04G292000 Theobroma cacao HOM05D000322 ORTHO05D000186 2.4e-08 63.2 149 27.5
vmacro08088 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 2.4e-08 63.2 150 30.7
vmacro08090 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 2.4e-08 63.2 157 30.6
vmacro08091 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 2.4e-08 63.2 157 31.2
Duzib128G1596 Durio zibethinus HOM05D000322 ORTHO05D000186 3.1e-08 62.8 149 28.9
Thecc.05G206800 Theobroma cacao HOM05D000322 ORTHO05D000186 3.1e-08 62.8 149 27.5
Eucgr.A00150 Eucalyptus grandis HOM05D000322 ORTHO05D000186 4.0e-08 62.4 148 31.1
Eucgr.A00176 Eucalyptus grandis HOM05D000322 ORTHO05D000186 4.0e-08 62.4 178 30.9
FAN07G1254 Fragaria x ananassa HOM05D000322 ORTHO05D000186 4.0e-08 62.4 150 29.3
Thecc.04G292600 Theobroma cacao HOM05D000322 ORTHO05D000186 4.0e-08 62.4 149 26.8
vmacro08089 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 4.0e-08 62.4 153 31.4
Duzib212G0823 Durio zibethinus HOM05D000322 ORTHO05D000186 5.3e-08 62.0 149 27.5
Duzib212G0435 Durio zibethinus HOM05D000322 ORTHO05D000186 6.9e-08 61.6 149 28.2
Gohir.A10G170200 Gossypium hirsutum HOM05D000322 ORTHO05D000186 6.9e-08 61.6 149 28.9
Gorai.005G064000 Gossypium raimondii HOM05D000322 ORTHO05D000186 6.9e-08 61.6 149 26.8
COL.COLO4_33593 Corchorus olitorius HOM05D000322 ORTHO05D000186 9.0e-08 61.2 150 28.7
Thecc.05G207000 Theobroma cacao HOM05D000322 ORTHO05D000186 9.0e-08 61.2 149 26.8
Duzib151G0555 Durio zibethinus HOM05D000322 ORTHO05D000186 1.2e-07 60.8 148 25.0
Gohir.D10G177100 Gossypium hirsutum HOM05D000322 ORTHO05D000186 1.2e-07 60.8 149 28.2
Oeu006051.1 Olea europaea HOM05D000322 ORTHO05D000186 1.2e-07 60.8 148 31.8
FvH4_4g19000 Fragaria vesca HOM05D000322 ORTHO05D000186 1.5e-07 60.5 151 29.1
Lj3A826T83 Lonicera japonica HOM05D000322 ORTHO05D000186 1.5e-07 60.5 150 28.7
Thecc.05G206600 Theobroma cacao HOM05D000322 ORTHO05D000186 1.5e-07 60.5 149 27.5
Duzib151G0776 Durio zibethinus HOM05D000322 ORTHO05D000186 2.0e-07 60.1 149 28.2
Lj3A826T81 Lonicera japonica HOM05D000322 ORTHO05D000186 2.0e-07 60.1 150 28.0
Gorai.011G197800 Gossypium raimondii HOM05D000322 ORTHO05D000186 2.6e-07 59.7 149 28.2
Duzib052G0339 Durio zibethinus HOM05D000322 ORTHO05D000186 3.4e-07 59.3 149 28.2
FAN07G2729 Fragaria x ananassa HOM05D000322 ORTHO05D000186 4.5e-07 58.9 140 32.9
Psat1g156800 Pisum sativum HOM05D000322 ORTHO05D000186 4.5e-07 58.9 156 30.8
Duzib151G1054 Durio zibethinus HOM05D000322 ORTHO05D000186 5.8e-07 58.5 92 34.8
FAN12G2007 Fragaria x ananassa HOM05D000322 ORTHO05D000186 7.6e-07 58.2 146 30.1
Gohir.D10G176300 Gossypium hirsutum HOM05D000322 ORTHO05D000186 7.6e-07 58.2 149 29.5
FvH4_4g18970 Fragaria vesca HOM05D000322 ORTHO05D000186 9.9e-07 57.8 140 32.1
FAN12G1697 Fragaria x ananassa HOM05D000322 ORTHO05D000186 9.9e-07 57.8 140 32.1
FAN12G3628 Fragaria x ananassa HOM05D000322 ORTHO05D000186 9.9e-07 57.8 140 32.1
Gohir.A10G169466 Gossypium hirsutum HOM05D000322 ORTHO05D000186 9.9e-07 57.8 154 27.3
Gohir.D10G175700 Gossypium hirsutum HOM05D000322 ORTHO05D000186 9.9e-07 57.8 154 26.6
Gorai.011G196800 Gossypium raimondii HOM05D000322 ORTHO05D000186 9.9e-07 57.8 154 26.6
Gorai.N011500 Gossypium raimondii HOM05D000322 ORTHO05D000186 9.9e-07 57.8 154 26.6
Potri.010G000600 Populus trichocarpa HOM05D000322 ORTHO05D000186 9.9e-07 57.8 150 28.0
Dinv44334 Davidia involucrata HOM05D000322 ORTHO05D000186 1.3e-06 57.4 145 28.3
Duzib151G0753 Durio zibethinus HOM05D000322 ORTHO05D000186 1.3e-06 57.4 149 25.5
CAN.G407.19 Capsicum annuum HOM05D000322 ORTHO05D000186 1.7e-06 57.0 152 25.7
Gohir.A10G169600 Gossypium hirsutum HOM05D000322 ORTHO05D000186 3.8e-06 55.8 149 28.9
Nitab4.5_0002322g0020 Nicotiana tabacum HOM05D000032 ORTHO05D004656 3.8e-06 55.8 148 27.0
Gorai.011G196600 Gossypium raimondii HOM05D000322 ORTHO05D000186 4.9e-06 55.5 154 26.0
Migut.G00115 Erythranthe guttata HOM05D000322 ORTHO05D000186 8.4e-06 54.7 157 28.7
Gohir.D02G057240 Gossypium hirsutum HOM05D000322 ORTHO05D000186 8.4e-06 54.7 150 28.0
Solyc03g117460.1 Solanum lycopersicum HOM05D000322 ORTHO05D000186 8.4e-06 54.7 152 25.0


User provided reference genes

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